You are here

Home

ASPNIDRAFT_203508-T1, ASPNIDRAFT_203508-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_203508-T1
Unique NameASPNIDRAFT_203508-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:888510..890270+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_203508-T1 ID=ASPNIDRAFT_203508-T1|Name=ASPNIDRAFT_203508-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1761bp|location=Sequence derived from alignment at ACJE01000016.1:888510..890270+ (Aspergillus niger ATCC 1015)
GTTTGGTAGAAAGCGGCCTCGCTCACACGATGACTCTGCATCTTCCGATG
GACCGGACCCTGTGCGTCACCGGCCTCTTTCCTGGCAACCATCAGCTCCT
GTGGAACCTTCCGTGAAATCTACTCAGCTTCGTTCCATCGGCGTTGAGTC
GATTCTGAACCCACCGTCAAAAGCAGCAGTCGTTGCAGCAGAACCCGGTC
GCGAAGGATTGGGGTCCCAGGTGCCGACTACTTCATCGTCACCATCCCAT
GCACGACTGCCCTCCTCCCCATCAGTCCATCTTCCCTCTCCCTCTGTTCA
CCCAGCAAAACGTCTCTCTGCATCTCCCGCTATGAAACACCATCAGGCTA
TTGCCCCTGCTTCTCCTTCTGCGCGTTTTGTTCCAACGGGAGGCGGCTAC
GCCCAGAGACTGGGTGTTTCACAGTCTCCTCTGGCTCACCCATCTCGTCT
AGCCTCTTATTCAGCAGCTCCAGGCTCTCCCCTATCCGTTGATCCATTCC
CTGGGCAGTCAGTATCGACATCCACGCATCCTGCCCCGGCTCCAGTCTCC
ATGCATTCGACTCCAACTTTCCACAGCCGTCGGACAAGCGCCAACCCCAC
ACCTGCTCCCAGCTCTCAGGAAACAAGCCCTACAACCCCCGTCTCTGCTT
ACAGTCAGCTCGGGCGGTCATCTCCAGCAGTATCTGCTGCGCCAATGCAG
CAAACTACACCCTCTTTCCTCAATGCAACCGCGTACGGATCCAGTGAGCC
CGCCACTCGCTTGCCTTCAGTAATGGCGGGACCAAGATCTACGGGTGAAG
AAGCGGCTACTGCGGGAGCCCCGCCAGAGAATCCTCCTTATCCTGGCATG
ATTCCTTGCATTCTAGACCTGAAATCAGGGTCTTCTAGTCAGGCAGAGAA
ACGGAAGGCGAACAGCGATGCATCGAGGAGGTTCCGGAATCGGAAGAGAA
ACGAAATGCAGCTGGAGCAAAAGATTGCCGGGCAACTGGAAGAGATCCAG
AAGAAAACTGAAGAGTTGAAAAGGCGGGACGATCAAATCCGATCTCTGAT
GCAGGAACGAGATTTCTATCGCTCTGAGAGGGATTTCTTCCGTGAACACG
TCTCCCGCTTAGTGCCTACAGGTCAGCTTCCGGCCAGGCCAGCATCCCCA
CTTACCCTACGACCGCCCTTCGAGTCCACCGCCTCTGAGCGCGAGGCCAC
ATGGCATGCCTCCGAGGCCAGAAAAATGGTCGAGAACACTTCTGGAAGTG
GAAAGCTGGCCCCAGCGCCATCTCACCTGATGGCCGGTTCGTCAACCAGG
CCGCCCGTGACGTGGTCGACCGCTCCGACTTCGTATCCGGCAGCCCACGT
TGAGCGAAGTATGCTGCCCGACGAACAGCAAGCAAGATCATTGCCTCAGT
TCCCTGGACAATGGGCGCGAAACTCCTAAATGAGATGAATAGCAAACGTG
AACATCGGGCGCCTAATCTGGCTTTGAAATCTCGGGTATCAGATTCCTCT
ATGGTACTTCTAGCGGCTCGCAGGGAGGGCTACTAATGCCAGCGCGACAC
GCTTTCTCGAGATATCGTCATTTCTCATTTTTCCCTTCTTGTCATGTAAT
CGACCTTTGTGTGCCCTTGCACATCGGGGGACTGAGAGCCATAAAAGTTC
CTAAAAGGCTTGTTTTCTTTATCCGCCGGAGGCTAAGTCATCTTAAGCAA
TGGGGAAAAGCTCTCTGCACACAGTTTGTGTGATCAGCATATGAAATAGG
TGTATGGACGG
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:888510..890270+

>ASPNIDRAFT_203508-T1 ID=ASPNIDRAFT_203508-T1|Name=ASPNIDRAFT_203508-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1098bp|location=Sequence derived from alignment at ACJE01000016.1:888510..890270+ (Aspergillus niger ATCC 1015)
ATGAAACACCATCAGGCTATTGCCCCTGCTTCTCCTTCTGCGCGTTTTGT
TCCAACGGGAGGCGGCTACGCCCAGAGACTGGGTGTTTCACAGTCTCCTC
TGGCTCACCCATCTCGTCTAGCCTCTTATTCAGCAGCTCCAGGCTCTCCC
CTATCCGTTGATCCATTCCCTGGGCAGTCAGTATCGACATCCACGCATCC
TGCCCCGGCTCCAGTCTCCATGCATTCGACTCCAACTTTCCACAGCCGTC
GGACAAGCGCCAACCCCACACCTGCTCCCAGCTCTCAGGAAACAAGCCCT
ACAACCCCCGTCTCTGCTTACAGTCAGCTCGGGCGGTCATCTCCAGCAGT
ATCTGCTGCGCCAATGCAGCAAACTACACCCTCTTTCCTCAATGCAACCG
CGTACGGATCCAGTGAGCCCGCCACTCGCTTGCCTTCAGTAATGGCGGGA
CCAAGATCTACGGGTGAAGAAGCGGCTACTGCGGGAGCCCCGCCAGAGAA
TCCTCCTTATCCTGGCATGATTCCTTGCATTCTAGACCTGAAATCAGGGT
CTTCTAGTCAGGCAGAGAAACGGAAGGCGAACAGCGATGCATCGAGGAGG
TTCCGGAATCGGAAGAGAAACGAAATGCAGCTGGAGCAAAAGATTGCCGG
GCAACTGGAAGAGATCCAGAAGAAAACTGAAGAGTTGAAAAGGCGGGACG
ATCAAATCCGATCTCTGATGCAGGAACGAGATTTCTATCGCTCTGAGAGG
GATTTCTTCCGTGAACACGTCTCCCGCTTAGTGCCTACAGGTCAGCTTCC
GGCCAGGCCAGCATCCCCACTTACCCTACGACCGCCCTTCGAGTCCACCG
CCTCTGAGCGCGAGGCCACATGGCATGCCTCCGAGGCCAGAAAAATGGTC
GAGAACACTTCTGGAAGTGGAAAGCTGGCCCCAGCGCCATCTCACCTGAT
GGCCGGTTCGTCAACCAGGCCGCCCGTGACGTGGTCGACCGCTCCGACTT
CGTATCCGGCAGCCCACGTTGAGCGAAGTATGCTGCCCGACGAACAGCAA
GCAAGATCATTGCCTCAGTTCCCTGGACAATGGGCGCGAAACTCCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203508ASPNIDRAFT_203508Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203508-T1.utr5p1ASPNIDRAFT_203508-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203508-T1.exon1ASPNIDRAFT_203508-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203508-T1.cdsASPNIDRAFT_203508-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203508-T1.utr3p1ASPNIDRAFT_203508-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_203508-T1ASPNIDRAFT_203508-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR004827
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:888510..890270 +
Powered by Drupal