You are here

Home

ASPNIDRAFT_204333-T1, ASPNIDRAFT_204333-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_204333-T1
Unique NameASPNIDRAFT_204333-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:216909..218173+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_204333-T1 ID=ASPNIDRAFT_204333-T1|Name=ASPNIDRAFT_204333-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1265bp|location=Sequence derived from alignment at ACJE01000012.1:216909..218173+ (Aspergillus niger ATCC 1015)
AAAAAGGTTTGTGAAGGTTTTTGCTCTGGAGGAGAAGAGAGGGTCTGCGG
CCCACGCGGGCCCACGGCCGCGGTTGTCTTAAAGCTGGCGAGCTCTTCAT
TTCCACGCGTCTGTCAGCCTGCCTTTTCCCGCTTCTTTTCCTGCTCCGAT
CGCGCTGTTTGAAAGAGAAAAAAAAGTCAGAAAAAAAAGGTCAGAGAGAG
AAAGATAGAAACTTTCTGATTTTTCTTTTTTTCTGCTGCTGTTGCATCCC
TGCATCTGCTTGGGCCCATTCTTTCTCTGTTTCTTTCATACCACACCCCC
AAAGTGCAGCAGCCTAAGTTCCAACGTTGAAACCATGGAGGACGGTAAAG
GTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGAGATCAATGTCAAATAT
GCCGATATCTTATTGCTCGCCTGTTGTTTCTGTTCGGGGTTGCTGGACAG
CACCATGTACAATGGTGAGTCACTCTCACTCTCTCCACTCCACCCTTTCC
TCCACACCTTTCCTTTCTTTCTCTTACCCCATCACAATCTCCATAAAATC
CCCATAATTCATAATGGAAGCTTACTTACACTCTCCCCACAGCCTACAAC
ACTTTCGTTTCCATGCAAACGGGAAACACCATTTTCGTGGGTTTGGGTGC
CTCGAAGCAGGATAGCCGACCGTACGACTGGGCGCGATCCTTGACGGCCA
TCGGCTGTTATGCGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTT
CTCGGTCCCAAACGGCGCGGCACTCTGGTCGCCTGTTTTCTGCTGCAGGT
CGTGCTTGTCATCATCGCAGCTGCCCTCTCTCAAAGCCATGTCATCGCCG
GTGACTTAGCCGACGCCCACTCCTCCACATACATCACCCACTGGAGCCAA
GAGGCCGTCATCGTCCTGCTCAGTATGCAGTCCGCGGGCCAGACCGTCGC
CAGTCGTGTGCTGGGCTACAACGAAGTGCCGACCGTGGTGATCACCAGTT
TGCTGTGCGATCTGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAG
AAGCGCGACCGTCGTGTCATCGCCTTCATCCTGACCCTGTTGGGCGCCAT
TGCCGGTGGAGGCATCAGCAAAGCCACGGGCAACATCTGGGCAGCTCTGT
GGATCATCGGAGGTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGG
CACGTCAAATAAGTAAATAGTTAGCTTCCTTCTTTTTTGTTCTTTACTCC
CTCTTGGCATTTTCC
back to top

Coding sequence (CDS) from alignment at ACJE01000012.1:216909..218173+

>ASPNIDRAFT_204333-T1 ID=ASPNIDRAFT_204333-T1|Name=ASPNIDRAFT_204333-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1500bp|location=Sequence derived from alignment at ACJE01000012.1:216909..218173+ (Aspergillus niger ATCC 1015)
ATGGAGGACGGTAAAGGTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGA
GATCAATGTCAAATATGCCGATATCTTATTGCTCGCCTGTTGTTTCTGTT
CGGGGTTGCTGGACAGCACCATGTACAATGCCTACAACACTTTCGTTTCC
ATGCAAACGGGAAACACCATTTTCGTGGGTTTGGGTGCCTCGAAGCAGGA
TAGCCGACCGTACGACTGGGCGCGATCCTTGACGGCCATCGGCTGTTATG
CGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTTCTCGGTCCCAAA
CGGCGCGGCACTCTGGTCGCCTGTTTTCTGCTGCAGGTCGTGCTTGTCAT
CATCGCAGCTGCCCTCTCTCAAAGCCATGTCATCGCCGGTGACTTAGCCG
ACGCCCACTCCTCCACATACATCACCCACTGGAGCCAAGAGGCCGTCATC
GTCCTGCTCAGTATGCAGTCCGCGGGCCAGACCGTCGCCAGTCGTGTGCT
GGGCTACAACGAAGTGCCGACCGTGGTGATCACCAGTTTGCTGTGCGATC
TGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAGAAGCGCGACCGT
CGTGTCATCGCCTTCATCCTGACCCTGTTGGGCGCCATTGCCGGTGGAGG
CATCAGCAAAGCCACGGGCAACATCTGGGCAGCTCTGTGGATCATCGGAG
GTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGGCACGTCAAATAA
ATGGAGGACGGTAAAGGTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGA
GATCAATGTCAAATATGCCGATATCTTATTGCTCGCCTGTTGTTTCTGTT
CGGGGTTGCTGGACAGCACCATGTACAATGCCTACAACACTTTCGTTTCC
ATGCAAACGGGAAACACCATTTTCGTGGGTTTGGGTGCCTCGAAGCAGGA
TAGCCGACCGTACGACTGGGCGCGATCCTTGACGGCCATCGGCTGTTATG
CGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTTCTCGGTCCCAAA
CGGCGCGGCACTCTGGTCGCCTGTTTTCTGCTGCAGGTCGTGCTTGTCAT
CATCGCAGCTGCCCTCTCTCAAAGCCATGTCATCGCCGGTGACTTAGCCG
ACGCCCACTCCTCCACATACATCACCCACTGGAGCCAAGAGGCCGTCATC
GTCCTGCTCAGTATGCAGTCCGCGGGCCAGACCGTCGCCAGTCGTGTGCT
GGGCTACAACGAAGTGCCGACCGTGGTGATCACCAGTTTGCTGTGCGATC
TGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAGAAGCGCGACCGT
CGTGTCATCGCCTTCATCCTGACCCTGTTGGGCGCCATTGCCGGTGGAGG
CATCAGCAAAGCCACGGGCAACATCTGGGCAGCTCTGTGGATCATCGGAG
GTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGGCACGTCAAATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204333ASPNIDRAFT_204333Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204333-T1.utr5p1ASPNIDRAFT_204333-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204333-T1.exon1ASPNIDRAFT_204333-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_204333-T1.exon2ASPNIDRAFT_204333-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204333-T1.cdsASPNIDRAFT_204333-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204333-T1.utr3p1ASPNIDRAFT_204333-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204333-T1ASPNIDRAFT_204333-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR010699
DBxrefPFAM:PF06912
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:216909..218173 +
Powered by Drupal