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ASPNIDRAFT_204505-T1, ASPNIDRAFT_204505-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_204505-T1
Unique NameASPNIDRAFT_204505-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:744367..745392+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_204505-T1 ID=ASPNIDRAFT_204505-T1|Name=ASPNIDRAFT_204505-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1026bp|location=Sequence derived from alignment at ACJE01000012.1:744367..745392+ (Aspergillus niger ATCC 1015)
CGCCGTCGCGACAAGTCTTCAAGATGCCGGTTAGCAGCCCTCCCCGTTAT
TCGAACGACCATGAATACCTCGTTTTTGCTGGAAATAAAAATAATGAATA
CGGCGACACGGAATAAGGACCAGTGGTCGGGATGATGAAGTGAACAGCAG
GCTAACGCTCACCTTTTTTCAATATAGAGCCACAAGAGTTTCCGCACCAA
GCAGAAGCTTGCCAAAGCTCAGAGACAGAACCGTCCTATCCCCCAGTGGA
TTCGTCTCAGGACCGGTAACACCATCAGGTAAATAAGAAACCGTCACCGT
TCCATTTGCACGCACCCACACAACACCCCCGCGAAGTCCTCGATGAGTCC
CAGCGAAGAACACAAAGAACATGAAAGGGAAGGGGATACCAGCGAAGGAA
GAAACAAGAGAAGGATGCATAAGATGGTAGCACCAGATGACTCGCCATCA
CGCCAAATCATCAATCAACTAGGCAAACCGCTGGGAACAACATCGAAGGA
CACAGCACACTCCACACACTACTCTCATACACACAAACATTTTCACAGTC
GAACACAATGAATACTAACATCTCCTTTTCTCAACCCAGATACAACGCCA
AGCGTAGGCACTGGCGCAAGTCCCGTCTCGGAGTCTAAATTCGTCCTTTG
GAACCACACACACCAACCGACTTTTTCGATTCCGCCCCGAGAAATGTCTC
TGTCCACCTGCTGCTTTCCCGGGGGAAAATGTTTCGTTCAGTTGCTGTGA
TACCGCTGCCAACATCAACAACTCTTGTGTGCCGCTACTGCTCGCGATGA
TAAAAAAAGAACAAAAAATCCACTTGCATCATTATAGATTATGTTGCCTC
AAATCAAAACCCGCTTTTTGAGAGAAGTCCGTTTGATTCTCTACTGTTTT
CCTTTACATATCTCTCTCTTTCCCGCATAAACCGATTCGGGGACAATTTT
GCTGGCTTGCTATCCACTATGCGGGTAGTTCGTTAAGCATGGGAGGGGAG
AGTGTGCATAAGCGGTTGAAATATTT
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Coding sequence (CDS) from alignment at ACJE01000012.1:744367..745392+

>ASPNIDRAFT_204505-T1 ID=ASPNIDRAFT_204505-T1|Name=ASPNIDRAFT_204505-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=468bp|location=Sequence derived from alignment at ACJE01000012.1:744367..745392+ (Aspergillus niger ATCC 1015)
ATGCCGAGCCACAAGAGTTTCCGCACCAAGCAGAAGCTTGCCAAAGCTCA
GAGACAGAACCGTCCTATCCCCCAGTGGATTCGTCTCAGGACCGGTAACA
CCATCAGATACAACGCCAAGCGTAGGCACTGGCGCAAGTCCCGTCTCGGA
GTCTAAATGCCGAGCCACAAGAGTTTCCGCACCAAGCAGAAGCTTGCCAA
AGCTCAGAGACAGAACCGTCCTATCCCCCAGTGGATTCGTCTCAGGACCG
GTAACACCATCAGATACAACGCCAAGCGTAGGCACTGGCGCAAGTCCCGT
CTCGGAGTCTAAATGCCGAGCCACAAGAGTTTCCGCACCAAGCAGAAGCT
TGCCAAAGCTCAGAGACAGAACCGTCCTATCCCCCAGTGGATTCGTCTCA
GGACCGGTAACACCATCAGATACAACGCCAAGCGTAGGCACTGGCGCAAG
TCCCGTCTCGGAGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL39ASPNIDRAFT_204505Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204505-T1ASPNIDRAFT_204505-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204505-T1.utr5p1ASPNIDRAFT_204505-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204505-T1.exon1ASPNIDRAFT_204505-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_204505-T1.exon2ASPNIDRAFT_204505-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_204505-T1.exon3ASPNIDRAFT_204505-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204505-T1.cdsASPNIDRAFT_204505-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_204505-T1.utr3p1ASPNIDRAFT_204505-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000077
DBxrefInterPro:IPR023626
DBxrefPFAM:PF00832
Product60S ribosomal protein L39
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:744367..745392 +
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