You are here

Home

ASPNIDRAFT_205396-T1, ASPNIDRAFT_205396-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_205396-T1
Unique NameASPNIDRAFT_205396-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3528009..3530003-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_205396-T1 ID=ASPNIDRAFT_205396-T1|Name=ASPNIDRAFT_205396-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1995bp|location=Sequence derived from alignment at ACJE01000004.1:3528009..3530003- (Aspergillus niger ATCC 1015)
CTTTATCATTCTCCTCTGCTTTACGCCATTGTTTCTCTTGCAGTGAGCAT
TGCGACTTCGATTATGCGCCCGTGATTGTCTACGCCCAACATCCCTCCGC
AAGGACAGAACAATCCCAGGATGACCGCGTCTTCAGAAACCCAGTCCGCT
CTGGCGGAATCTCCACAGAGCATAGTATTACATGTGCTATGTCCATCTTT
ACCTCCTCCTAACCGATTCACTCTCCACGACATCTCTCCATCCACCACCA
TCTCCACTCTCAAAGCTCGAATCGCCCAGACCATTCCGAGTGAACCATCC
CCTGAAACTCAGAGGCTGATATACCGGGGGAAGCCCCTTACGAACGACGC
CGTGGCGCTAAATGATGTGTTAGAGTCATCAAATGTGCGTATGATCTTAT
TCCTATGCCCCCTTGTAGTCGGCAGATACTAACAGTGATACTTGACCCAG
GATACCGAGTATTCCATCCACCTCGTCCTTCCTCCTGCCCCAGTTCCCCA
TGCTTCAACTTCTGCCAGAGCTCCTGCTCCAATGCCGCGGGGAGCTTCAG
GTAACCCCGCGCCTCAGAGTCCATTCTCATCGAACCGATTCACGCCGCAA
CACCTGCCTCACGGACAAGAGATCAGGTATCGAGGTCCCGCATTGCCCGC
TGTTCCCCATGAGGCAGAGATCGGACTCGCCTTGAGGCGGAATATCGAGG
CTATTCGTCGACAGATTGATATGCAGGAACGGGGCGGGCCGTTGGGAGGC
GTCGCGGCAGGCACCGCGGGGGCTACTTCCCACTCGACCACATCCACGAC
TACGACAGCTTCGTTCGCTCAGCAACCTGCATGGCCACACGTAACACCTG
GTCTATCGCACCCAGGACATTCGTCCATCTCATCTGATTTCACAATGGCT
TCCGGCTCATCGGGAACAGCCAATGTCCATAGCAACCTCCCCGAAGAAGT
CCGATTGCGCCTACAAATACTCAGAAATCAGATTGCGTTTGGCGAAGAGC
AACTGAACCGGGGGGTTGCGCCCCCAATGGACCATATAATTCGCATACGT
ACACAATTGTTCGCTTTGCTCGACGACCAATATCAGAACCCACATGCTGA
GCGCGACGGCTCGATTGAATCTTTGCTCACTCGCGTCTTTAATATCTATA
CCCGCGCTGATCAGCTCCGCGTCTCACAAGCTAGAACCATGCCCACACCT
GTTCTATCTGGACCTCCCAATCCCGCACCAGGGCAGGCTCCTCTGTACCT
TCTCTCGTCACCAAACGGCTATCAAGCCCTGGTTGCATCTCCCCGCGGTG
CAGAAACGATGCAGTCTTCTCTCGATACACTCCGAGCCATGCACTCCCCG
ACCGGAGCCTCTGCGCCTCGTACAGGTGCTCCACCGGAGATTCACAATGC
GAACGCAGTTGTCATGGAGAACATTGTCCGACAGGCCGTACTCAACCAAC
GCATCGAAAACAACGGGCAATTGAGCTTCACACGCAATCTCCGACGCATG
TGGCTATTTGTGCGCTTGTATTTCTTCTGCTACATGTTCAGCGAACCGGG
CACATGGTCTCGCGTGGTGTATGTAACCCTAGCCGTCCTTGTCTCACTCC
TGTCAGAAACCGGGATCCCACAGCAGTTGTACCGAATGCTTGTGGCGCCA
GTGCAACGACACCTGGAAGGACTGGTTCATTTCGCTCCGGACGAACCGAC
TCCAGCACCACCTGGCACGCAGTCAACTGGGCAAGGGAACGTTCCCACTG
CTCAGCCAACCGGAATGCGACACCAGCTGCGCCGCGTAGAACGGTCCTTG
GCGCTTTTCATTGCAAGCTTGGTTCCGGGCGTGGGCGAGAGACACGTGGA
AGTGCGCAATGCCGCAGAAGCGGCCCGGAACGCAGAGCGTGCAAGAGAGG
AAGAAGAGCGACGTCGACAGGAGGAAGAGGCCACCAACGCAGGCACGACT
GGTGAGGCTCAGGCACAGGCACAGGAGAGCAGCGAGAACGAACAG
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:3528009..3530003-

>ASPNIDRAFT_205396-T1 ID=ASPNIDRAFT_205396-T1|Name=ASPNIDRAFT_205396-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3618bp|location=Sequence derived from alignment at ACJE01000004.1:3528009..3530003- (Aspergillus niger ATCC 1015)
GATACCGAGTATTCCATCCACCTCGTCCTTCCTCCTGCCCCAGTTCCCCA
TGCTTCAACTTCTGCCAGAGCTCCTGCTCCAATGCCGCGGGGAGCTTCAG
GTAACCCCGCGCCTCAGAGTCCATTCTCATCGAACCGATTCACGCCGCAA
CACCTGCCTCACGGACAAGAGATCAGGTATCGAGGTCCCGCATTGCCCGC
TGTTCCCCATGAGGCAGAGATCGGACTCGCCTTGAGGCGGAATATCGAGG
CTATTCGTCGACAGATTGATATGCAGGAACGGGGCGGGCCGTTGGGAGGC
GTCGCGGCAGGCACCGCGGGGGCTACTTCCCACTCGACCACATCCACGAC
TACGACAGCTTCGTTCGCTCAGCAACCTGCATGGCCACACGTAACACCTG
GTCTATCGCACCCAGGACATTCGTCCATCTCATCTGATTTCACAATGGCT
TCCGGCTCATCGGGAACAGCCAATGTCCATAGCAACCTCCCCGAAGAAGT
CCGATTGCGCCTACAAATACTCAGAAATCAGATTGCGTTTGGCGAAGAGC
AACTGAACCGGGGGGTTGCGCCCCCAATGGACCATATAATTCGCATACGT
ACACAATTGTTCGCTTTGCTCGACGACCAATATCAGAACCCACATGCTGA
GCGCGACGGCTCGATTGAATCTTTGCTCACTCGCGTCTTTAATATCTATA
CCCGCGCTGATCAGCTCCGCGTCTCACAAGCTAGAACCATGCCCACACCT
GTTCTATCTGGACCTCCCAATCCCGCACCAGGGCAGGCTCCTCTGTACCT
TCTCTCGTCACCAAACGGCTATCAAGCCCTGGTTGCATCTCCCCGCGGTG
CAGAAACGATGCAGTCTTCTCTCGATACACTCCGAGCCATGCACTCCCCG
ACCGGAGCCTCTGCGCCTCGTACAGGTGCTCCACCGGAGATTCACAATGC
GAACGCAGTTGTCATGGAGAACATTGTCCGACAGGCCGTACTCAACCAAC
GCATCGAAAACAACGGGCAATTGAGCTTCACACGCAATCTCCGACGCATG
TGGCTATTTGTGCGCTTGTATTTCTTCTGCTACATGTTCAGCGAACCGGG
CACATGGTCTCGCGTGGTGTATGTAACCCTAGCCGTCCTTGTCTCACTCC
TGTCAGAAACCGGGATCCCACAGCAGTTGTACCGAATGCTTGTGGCGCCA
GTGCAACGACACCTGGAAGGACTGGTTCATTTCGCTCCGGACGAACCGAC
TCCAGCACCACCTGGCACGCAGTCAACTGGGCAAGGGAACGTTCCCACTG
CTCAGCCAACCGGAATGCGACACCAGCTGCGCCGCGTAGAACGGTCCTTG
GCGCTTTTCATTGCAAGCTTGGTTCCGGGCGTGGGCGAGAGACACGTGGA
AGTGCGCAATGCCGCAGAAGCGGCCCGGAACGCAGAGCGTGCAAGAGAGG
AAGAAGAGCGACGTCGACAGGAGGAAGAGGCCACCAACGCAGGCACGACT
GGTGAGGCTCAGGCACAGGCACAGGAGAGCAGCGAGAACGAACAGATGAC
CGCGTCTTCAGAAACCCAGTCCGCTCTGGCGGAATCTCCACAGAGCATAG
TATTACATGTGCTATGTCCATCTTTACCTCCTCCTAACCGATTCACTCTC
CACGACATCTCTCCATCCACCACCATCTCCACTCTCAAAGCTCGAATCGC
CCAGACCATTCCGAGTGAACCATCCCCTGAAACTCAGAGGCTGATATACC
GGGGGAAGCCCCTTACGAACGACGCCGTGGCGCTAAATGATGTGTTAGAG
TCATCAAATGATACCGAGTATTCCATCCACCTCGTCCTTCCTCCTGCCCC
AGTTCCCCATGCTTCAACTTCTGCCAGAGCTCCTGCTCCAATGCCGCGGG
GAGCTTCAGGTAACCCCGCGCCTCAGAGTCCATTCTCATCGAACCGATTC
ACGCCGCAACACCTGCCTCACGGACAAGAGATCAGGTATCGAGGTCCCGC
ATTGCCCGCTGTTCCCCATGAGGCAGAGATCGGACTCGCCTTGAGGCGGA
ATATCGAGGCTATTCGTCGACAGATTGATATGCAGGAACGGGGCGGGCCG
TTGGGAGGCGTCGCGGCAGGCACCGCGGGGGCTACTTCCCACTCGACCAC
ATCCACGACTACGACAGCTTCGTTCGCTCAGCAACCTGCATGGCCACACG
TAACACCTGGTCTATCGCACCCAGGACATTCGTCCATCTCATCTGATTTC
ACAATGGCTTCCGGCTCATCGGGAACAGCCAATGTCCATAGCAACCTCCC
CGAAGAAGTCCGATTGCGCCTACAAATACTCAGAAATCAGATTGCGTTTG
GCGAAGAGCAACTGAACCGGGGGGTTGCGCCCCCAATGGACCATATAATT
CGCATACGTACACAATTGTTCGCTTTGCTCGACGACCAATATCAGAACCC
ACATGCTGAGCGCGACGGCTCGATTGAATCTTTGCTCACTCGCGTCTTTA
ATATCTATACCCGCGCTGATCAGCTCCGCGTCTCACAAGCTAGAACCATG
CCCACACCTGTTCTATCTGGACCTCCCAATCCCGCACCAGGGCAGGCTCC
TCTGTACCTTCTCTCGTCACCAAACGGCTATCAAGCCCTGGTTGCATCTC
CCCGCGGTGCAGAAACGATGCAGTCTTCTCTCGATACACTCCGAGCCATG
CACTCCCCGACCGGAGCCTCTGCGCCTCGTACAGGTGCTCCACCGGAGAT
TCACAATGCGAACGCAGTTGTCATGGAGAACATTGTCCGACAGGCCGTAC
TCAACCAACGCATCGAAAACAACGGGCAATTGAGCTTCACACGCAATCTC
CGACGCATGTGGCTATTTGTGCGCTTGTATTTCTTCTGCTACATGTTCAG
CGAACCGGGCACATGGTCTCGCGTGGTGTATGTAACCCTAGCCGTCCTTG
TCTCACTCCTGTCAGAAACCGGGATCCCACAGCAGTTGTACCGAATGCTT
GTGGCGCCAGTGCAACGACACCTGGAAGGACTGGTTCATTTCGCTCCGGA
CGAACCGACTCCAGCACCACCTGGCACGCAGTCAACTGGGCAAGGGAACG
TTCCCACTGCTCAGCCAACCGGAATGCGACACCAGCTGCGCCGCGTAGAA
CGGTCCTTGGCGCTTTTCATTGCAAGCTTGGTTCCGGGCGTGGGCGAGAG
ACACGTGGAAGTGCGCAATGCCGCAGAAGCGGCCCGGAACGCAGAGCGTG
CAAGAGAGGAAGAAGAGCGACGTCGACAGGAGGAAGAGGCCACCAACGCA
GGCACGACTGGTGAGGCTCAGGCACAGGCACAGGAGAGCAGCGAGAACGA
ACAGATGACCGCGTCTTCAGAAACCCAGTCCGCTCTGGCGGAATCTCCAC
AGAGCATAGTATTACATGTGCTATGTCCATCTTTACCTCCTCCTAACCGA
TTCACTCTCCACGACATCTCTCCATCCACCACCATCTCCACTCTCAAAGC
TCGAATCGCCCAGACCATTCCGAGTGAACCATCCCCTGAAACTCAGAGGC
TGATATACCGGGGGAAGCCCCTTACGAACGACGCCGTGGCGCTAAATGAT
GTGTTAGAGTCATCAAAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205396ASPNIDRAFT_205396Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205396-T1ASPNIDRAFT_205396-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205396-T1.cdsASPNIDRAFT_205396-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205396-T1.exon2ASPNIDRAFT_205396-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205396-T1.exon1ASPNIDRAFT_205396-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205396-T1.utr5p1ASPNIDRAFT_205396-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR000626
DBxrefPFAM:PF00240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3528009..3530003 -
Powered by Drupal