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ASPNIDRAFT_205676-T1, ASPNIDRAFT_205676-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_205676-T1
Unique NameASPNIDRAFT_205676-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2505226..2506940-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_205676-T1 ID=ASPNIDRAFT_205676-T1|Name=ASPNIDRAFT_205676-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1715bp|location=Sequence derived from alignment at ACJE01000004.1:2505226..2506940- (Aspergillus niger ATCC 1015)
ATGCAGTCTCGGACGGAATAGTTCAAAAGGACGAATGGATACGCCGAGAT
AGACTGTCAAGCTTTGGTCCATCGACTAGTGACAGCCCACAGAGACTATC
ACCGGCGATCGAAAGGCATCTGGCTGACACGGTCTGCCCGACGGAGCATA
AAAGGGCGGTTCCCTTTGCGGTCTGTTTCGTTCGCCATCACTCTCGTCAC
TTCCTGGGCCAATCCAAACTTTTCTTCCGAAACCTATCTACTCAAAAGCC
TTTCCGTGCACACTCCGAGGACCATGTCTTCCACTTCCGATCGACAGTAT
GACGAAACGATAACTCGCCTAGTTGAGTATGTTTATCACTACGAAGTGAC
CAGCGACCTCGCTATCCTACGGGCCCGCTATGCCCTCATGGATGCTCTTG
GTTGCGCGCTGGAGACTCTTCAGCAAAGCCCCGAGTGTCGCGCTCTGATC
GGCCCATACACACCAGGTCTGGTCGCCCCTTATGGGTTCAAGCTGCCGGG
CACCTGCCACCAACTTGATCCAGTCAAGGGTGCCTTTGATATGGCAACCT
TGATTCGCTTCCTGGACCACAACGATGCATACCCTGGTGCTGAATGGGGC
CACCCGTCTGGTATGCCCGTCTGCGGGATCTACGCTCCCAGAAGCTTGGT
TGAATATAGGGCTAACCGATCGACAAAACAGATAACCTGGGCGCCATCTT
GGCGGTCACAGATTGGCTCAGCCGTACAGGCGCCACCAGCCAGCCACTGA
CCGTCCGGACGGTCCTGATCGCGATGATCAAAGCCTACGAGATTCAAGGC
TGCTACCAGATCCGCAATGCCTTCAACAAGGTGGGCCTAGATCATACGCT
ACTCGTGAAGATCGCCTCCACAGCTGTTGTAGCTTGGTTGATGGGTCTGA
CGGAGAAACAAGCCGCCGTCGCGCTCTCCCATGCGTGGGCTGATGGCCAC
CCTCTGCGCATTTTCCGTCAAAGTCCTAATGCGGGGCCACGCAAGGGCTG
GGCCGCTGGAGATGCCGCCATGCGTGCTGTACACTTGTGCTTACTAGCTC
GCGCCGGCCAGCCAGGCATTCCCAGCGCGCTAACTGAGCCGGAATGGGGG
TTTCTCGCTGTCAGCTTTGGGGGCAAAGAGCTGCAGCTGCCACGTCCTTT
CAAGACCCGGGTGATGGAGGAAGTTTTCTTCAAACTCATCACTGCAGAGG
GCCACGGCATCTCCGCAGTTCAGGCGGCCATGGCGCTGGCTGAGACCATG
GCCAGCAGGGGGATCGATCCTGCTACTGAAATCAGTCGCATCGATATCCG
CACGCATGAAGCGGCTGTACGCATCATCGACAAGCAAGGCCCGCTCACCA
ATGCGGCCGACCGCGATCACTGCATGCGGTACATGGTCTCGGTGGTGTTG
TTGAAGAACGCGATCATCGAAGCAGAGGACTACCACGATTCGAGCGTGTG
GGCCCATGATCCGCGTGTTGAGGCCCTACGCCAGCGGATCCATATGGCCG
AAGACCCGCAGTTCACCTACGGCTACCACCACAAAAAGGCGGCCGCCAGC
GGACTCACCGTCTTTCTGACCAACGGGGAGCAGTTAGACGAAGTAGTCGT
CGAATACCCAATCGGGCATCCGATGCACGAAGATACTTTGCCTAAGGTGC
GCGCCAAGTTTGAGCGAAACATGCAGGGCCTGTTCACGGCCGAGGAGACA
AGCCGGGTGATCGAC
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Coding sequence (CDS) from alignment at ACJE01000004.1:2505226..2506940-

>ASPNIDRAFT_205676-T1 ID=ASPNIDRAFT_205676-T1|Name=ASPNIDRAFT_205676-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2730bp|location=Sequence derived from alignment at ACJE01000004.1:2505226..2506940- (Aspergillus niger ATCC 1015)
ATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTCAGCCGTACAGGC
GCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCGATGATCAA
AGCCTACGAGATTCAAGGCTGCTACCAGATCCGCAATGCCTTCAACAAGG
TGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCCACAGCTGTTGTA
GCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCGCTCTCCCA
TGCGTGGGCTGATGGCCACCCTCTGCGCATTTTCCGTCAAAGTCCTAATG
CGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCCATGCGTGCTGTA
CACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCCAGCGCGCT
AACTGAGCCGGAATGGGGGTTTCTCGCTGTCAGCTTTGGGGGCAAAGAGC
TGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAGGAAGTTTTCTTC
AAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAGGCGGCCAT
GGCGCTGGCTGAGACCATGGCCAGCAGGGGGATCGATCCTGCTACTGAAA
TCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTACGCATCATCGAC
AAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGCATGCGGTA
CATGGTCTCGGTGGTGTTGTTGAAGAACGCGATCATCGAAGCAGAGGACT
ACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTTGAGGCCCTACGC
CAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGCTACCACCA
CAAAAAGGCGGCCGCCAGCGGACTCACCGTCTTTCTGACCAACGGGGAGC
AGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCATCCGATGCACGAA
GATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATGCAGGGCCT
GTTCACGGCCGAGGAGACAAGCCGGGTGATGTCTTCCACTTCCGATCGAC
AGTATGACGAAACGATAACTCGCCTAGTTGAGTATGTTTATCACTACGAA
GTGACCAGCGACCTCGCTATCCTACGGGCCCGCTATGCCCTCATGGATGC
TCTTGGTTGCGCGCTGGAGACTCTTCAGCAAAGCCCCGAGTGTCGCGCTC
TGATCGGCCCATACACACCAGGTCTGGTCGCCCCTTATGGGTTCAAGCTG
CCGGGCACCTGCCACCAACTTGATCCAGTCAAGGGTGCCTTTGATATGGC
AACCTTGATTCGCTTCCTGGACCACAACGATGCATACCCTGGTGCTGAAT
GGGGCCACCCGTCTGATAACCTGGGCGCCATCTTGGCGGTCACAGATTGG
CTCAGCCGTACAGGCGCCACCAGCCAGCCACTGACCGTCCGGACGGTCCT
GATCGCGATGATCAAAGCCTACGAGATTCAAGGCTGCTACCAGATCCGCA
ATGCCTTCAACAAGGTGGGCCTAGATCATACGCTACTCGTGAAGATCGCC
TCCACAGCTGTTGTAGCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGC
CGTCGCGCTCTCCCATGCGTGGGCTGATGGCCACCCTCTGCGCATTTTCC
GTCAAAGTCCTAATGCGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCC
GCCATGCGTGCTGTACACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGG
CATTCCCAGCGCGCTAACTGAGCCGGAATGGGGGTTTCTCGCTGTCAGCT
TTGGGGGCAAAGAGCTGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATG
GAGGAAGTTTTCTTCAAACTCATCACTGCAGAGGGCCACGGCATCTCCGC
AGTTCAGGCGGCCATGGCGCTGGCTGAGACCATGGCCAGCAGGGGGATCG
ATCCTGCTACTGAAATCAGTCGCATCGATATCCGCACGCATGAAGCGGCT
GTACGCATCATCGACAAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGA
TCACTGCATGCGGTACATGGTCTCGGTGGTGTTGTTGAAGAACGCGATCA
TCGAAGCAGAGGACTACCACGATTCGAGCGTGTGGGCCCATGATCCGCGT
GTTGAGGCCCTACGCCAGCGGATCCATATGGCCGAAGACCCGCAGTTCAC
CTACGGCTACCACCACAAAAAGGCGGCCGCCAGCGGACTCACCGTCTTTC
TGACCAACGGGGAGCAGTTAGACGAAGTAGTCGTCGAATACCCAATCGGG
CATCCGATGCACGAAGATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCG
AAACATGCAGGGCCTGTTCACGGCCGAGGAGACAAGCCGGGTGATGTCTT
CCACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGTTGAGTAT
GTTTATCACTACGAAGTGACCAGCGACCTCGCTATCCTACGGGCCCGCTA
TGCCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAGCAAAGCC
CCGAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGTCGCCCCT
TATGGGTTCAAGCTGCCGGGCACCTGCCACCAACTTGATCCAGTCAAGGG
TGCCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAACGATGCAT
ACCCTGGTGCTGAATGGGGCCACCCGTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00475472-methylcitrate dehydratase activity
GO:00515372 iron, 2 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205676ASPNIDRAFT_205676Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205676-T1ASPNIDRAFT_205676-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205676-T1.cdsASPNIDRAFT_205676-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205676-T1.utr3p1ASPNIDRAFT_205676-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205676-T1.exon2ASPNIDRAFT_205676-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205676-T1.exon1ASPNIDRAFT_205676-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205676-T1.utr5p1ASPNIDRAFT_205676-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR012705
DBxrefInterPro:IPR042188
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2505226..2506940 -
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