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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:1807919..1808872+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_205894-T1 ID=ASPNIDRAFT_205894-T1|Name=ASPNIDRAFT_205894-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=954bp|location=Sequence derived from alignment at ACJE01000004.1:1807919..1808872+ (Aspergillus niger ATCC 1015)
CCACAGCCATGGCGGAGTATTGGAAATCAGCGGTAGGCAGAAACGTTCTC
TCTCATCTCCCGTGTCTCAGCACTGACTCCGACACAGCCCAAGTTTTGGT
GCAAGCAATGCAAGATCTTCATTCGCGATACCGCCTTCGAAAAGTCCCAA
CATGAGGCTACAGCCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGA
CATCCATCGGAACAATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAA
ATGAGGTTGAGCGACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAA
GACGGGGATGCTGCGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACC
TCAGGAGCGACCTGTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAAT
TAGCGGAGATGGGTATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCC
CTGGCCGGAGAATGGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGA
GGAATCAAAAGCCAGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAG
AGCGGGATGAGGAGGAAGAAGAGGCGAAACAGGAAGCCGAACGTTTTGTT
AGTAAGGGCTGGGGCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGA
CACTGACCTCGACGCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGGTA
AATCCGCAGCTCCTGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAAGGCG
TCGGATTCCGTCAAGAGTCAGTTCCTGCCGGTCAAGTCGGAAGGGGATGC
AGCAGCTCCTGAGACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGCGAGA
CTGCCCCCTCCGAGGCGGCTCCTGTGACAAAGGAGGAACCGGAAGATGCC
CCAGCTACAGGGGTTGTTTTCAAAAAGCGCAAGGCTAAGGTTATGAGAAA
GTAA back to topCoding sequence (CDS) from alignment at ACJE01000004.1:1807919..1808872+ >ASPNIDRAFT_205894-T1 ID=ASPNIDRAFT_205894-T1|Name=ASPNIDRAFT_205894-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2385bp|location=Sequence derived from alignment at ACJE01000004.1:1807919..1808872+ (Aspergillus niger ATCC 1015)
ATGGCGGAGTATTGGAAATCAGCGCCCAAGTTTTGGTGCAAGCAATGCAA
GATCTTCATTCGCGATACCGCCTTCGAAAAGTCCCAACATGAGGCTACAG
CCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCCATCGGAAC
AATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTTGAGCG
ACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGATGCTG
CGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGCGACCT
GTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAGATGGG
TATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGGAGAAT
GGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAAAAGCC
AGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGATGAGGA
GGAAGAAGAGGCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGGCTGGG
GCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTGACCTCGAC
GCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGGTAAATCCGCAGCTCC
TGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAAGGCCGAGACTGCCCCCT
CCGAGGCGGCTCCTGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTACA
GGGGTTGTTTTCAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAAATGGC
GGAGTATTGGAAATCAGCGCCCAAGTTTTGGTGCAAGCAATGCAAGATCT
TCATTCGCGATACCGCCTTCGAAAAGTCCCAACATGAGGCTACAGCCAAG
CATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCCATCGGAACAATGA
GCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTTGAGCGACTTC
GCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGATGCTGCGCCC
TGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGCGACCTGTTTC
TCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAGATGGGTATCG
CTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGGAGAATGGCAG
ACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAAAAGCCAGTCA
ATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGATGAGGAGGAAG
AAGAGGCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGGCTGGGGCTCC
CGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTGACCTCGACGCTCT
TTTGGAGTCGACGAAAGATATTAAAAAGGGTAAATCCGCAGCTCCTGCGG
AATCGGCGCCGGAGCCAGAGCCTGAGAAGGCCGAGACTGCCCCCTCCGAG
GCGGCTCCTGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTACAGGGGT
TGTTTTCAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAAATGGCGGAGT
ATTGGAAATCAGCGCCCAAGTTTTGGTGCAAGCAATGCAAGATCTTCATT
CGCGATACCGCCTTCGAAAAGTCCCAACATGAGGCTACAGCCAAGCATCA
GGGTAATCTAAAGCGCTTCCTTCGTGACATCCATCGGAACAATGAGCAGC
AACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTTGAGCGACTTCGCCAG
ACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGATGCTGCGCCCTGGAA
ACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGCGACCTGTTTCTCTGG
AAGAGAGAAAGCGACAAATGGCACAATTAGCGGAGATGGGTATCGCTATT
CCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGGAGAATGGCAGACACT
GTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAAAAGCCAGTCAATCAC
TAGGGGTACGCAAACGAAAGCATGAAGAGCGGGATGAGGAGGAAGAAGAG
GCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGGCTGGGGCTCCCGGAC
ACGAGTGTATCCGGGTGCCCAAGAGGACACTGACCTCGACGCTCTTTTGG
AGTCGACGAAAGATATTAAAAAGGGTAAATCCGCAGCTCCTGCGGAATCG
GCGCCGGAGCCAGAGCCTGAGAAGGCCGAGACTGCCCCCTCCGAGGCGGC
TCCTGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTACAGGGGTTGTTT
TCAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000041.4 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013085 |
| DBxref | InterPro:IPR003604 |
| DBxref | PFAM:PF06220 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:1807919..1808872 + |
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