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ASPNIDRAFT_205944-T1, ASPNIDRAFT_205944-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_205944-T1
Unique NameASPNIDRAFT_205944-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1656497..1657453-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_205944-T1 ID=ASPNIDRAFT_205944-T1|Name=ASPNIDRAFT_205944-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=957bp|location=Sequence derived from alignment at ACJE01000004.1:1656497..1657453- (Aspergillus niger ATCC 1015)
CCAACCCAACATCCATCCACCATGCACGCCCCCTCGATCAGCGGGATGCG
TACCGCCATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCCTTCG
CCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCAGACC
CGGACCGCAAGCACCTCCTCCATGCGAGTCCGCAGCACACAGACCCTGAA
GCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCGAGCT
CTCTGGTTCTCTGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAAGAGC
GAAACCGTCCGTCTCGACTGGGACTCGTTCTTCAAGCTCCGCGCTAGCCG
CCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACCACGG
TCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTCGGGGCG
CAGGTCATGGGTCTTGATCCGTTTGTGGTGCTGGGTATGGCAACGGCGGC
GTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAATGCTGTTT
GGGGGTTGGTTTATCGCAGATATAAGCCTGCTGTTATGGTGGTAAGCTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCTTTTCCCTTAATTAAGTTG
CTGTTGAGAAGAAACGTGGATACTGATAGTGGGTTGTGTGTGTAGAAAGA
GAAGGAATTCTTCGACCGCATTAGACGCTTCCGTGTCGACCCCTCGTCCA
ACTCCATTGCTAACCCCGTTCCTGATTACTATGGTGAGAAGATCGGCAGT
GTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGCAA
GAGACGTCATTTCATCGTTTAGTTTAGTGGTTCTGTTTTGCATGGGATGC
CTCTTGTTTTCTTTTGAGTGATTGTTATTATGGCATTCTCGAGAACCCCG
TGGATTG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1656497..1657453-

>ASPNIDRAFT_205944-T1 ID=ASPNIDRAFT_205944-T1|Name=ASPNIDRAFT_205944-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1494bp|location=Sequence derived from alignment at ACJE01000004.1:1656497..1657453- (Aspergillus niger ATCC 1015)
AAAGAGAAGGAATTCTTCGACCGCATTAGACGCTTCCGTGTCGACCCCTC
GTCCAACTCCATTGCTAACCCCGTTCCTGATTACTATGGTGAGAAGATCG
GCAGTGTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAAC
CGCAAGAGACGTCATTTCATCGTTTAGATGCACGCCCCCTCGATCAGCGG
GATGCGTACCGCCATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCC
CCTTCGCCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCT
CAGACCCGGACCGCAAGCACCTCCTCCATGCGAGTCCGCAGCACACAGAC
CCTGAAGCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCC
CGAGCTCTCTGGTTCTCTGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCC
AAGAGCGAAACCGTCCGTCTCGACTGGGACTCGTTCTTCAAGCTCCGCGC
TAGCCGCCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCA
CCACGGTCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTC
GGGGCGCAGGTCATGGGTCTTGATCCGTTTGTGGTGCTGGGTATGGCAAC
GGCGGCGTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAATG
CTGTTTGGGGGTTGGTTTATCGCAGATATAAGCCTGCTGTTATGGTGAAA
GAGAAGGAATTCTTCGACCGCATTAGACGCTTCCGTGTCGACCCCTCGTC
CAACTCCATTGCTAACCCCGTTCCTGATTACTATGGTGAGAAGATCGGCA
GTGTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGC
AAGAGACGTCATTTCATCGTTTAGATGCACGCCCCCTCGATCAGCGGGAT
GCGTACCGCCATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCCT
TCGCCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCAG
ACCCGGACCGCAAGCACCTCCTCCATGCGAGTCCGCAGCACACAGACCCT
GAAGCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCGA
GCTCTCTGGTTCTCTGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAAG
AGCGAAACCGTCCGTCTCGACTGGGACTCGTTCTTCAAGCTCCGCGCTAG
CCGCCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACCA
CGGTCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTCGGG
GCGCAGGTCATGGGTCTTGATCCGTTTGTGGTGCTGGGTATGGCAACGGC
GGCGTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTGGGGAATGCTG
TTTGGGGGTTGGTTTATCGCAGATATAAGCCTGCTGTTATGGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0001405PAM complex, Tim23 associated import motor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PAM17ASPNIDRAFT_205944Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205944-T1ASPNIDRAFT_205944-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205944-T1.cdsASPNIDRAFT_205944-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205944-T1.utr3p1ASPNIDRAFT_205944-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205944-T1.exon2ASPNIDRAFT_205944-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205944-T1.exon1ASPNIDRAFT_205944-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205944-T1.utr5p1ASPNIDRAFT_205944-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264HN5
DBxrefInterPro:IPR013875
DBxrefPFAM:PF08566
ProductTIM23 complex component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1656497..1657453 -
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