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ASPNIDRAFT_205975-T1, ASPNIDRAFT_205975-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_205975-T1
Unique NameASPNIDRAFT_205975-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1577728..1578939-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_205975-T1 ID=ASPNIDRAFT_205975-T1|Name=ASPNIDRAFT_205975-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1212bp|location=Sequence derived from alignment at ACJE01000004.1:1577728..1578939- (Aspergillus niger ATCC 1015)
CTCATCGGTAAGTTCCTCCGATCCCGCCTCCCGTCGGTTACTTTTAAACG
TCCCTTCTCCTCGCTCCCCCCGAGTGCCTCTGTCCCTTGGATGTGGTCCT
GAAAGCTGACAACGTTGCGCCCCTCCTTCCAGAAAGTCAGACACACTCTA
TTACCGGATTTCCTTTCAAGAGCCTCCAAACCTCCCCCCAGCTCGACCAC
GTCGTCTCCCTTCCCAGTCCTCTAGATCTTACGTGTAACAAAGCTAAGCG
AGCTCTCGCAAACCACCCCTCATGGCTAACGACGAGTACGATGTGAGTAT
CCTCTTTCTCTCATTCGCACCCCTTGCCAAGCAACGGTATAACTAACGGG
CTACTTGGTAGTTTCTCTTCAAAGGTAAAGTTGCCACTTCCCGTCTCCGC
ACAGTCGCCGCTCGATCCCATCGCCTCTATTGTCGGCCGCATTTTCGCGA
TACACGGCTAACCAACGACGATTGTACTTAACAGTTGTCCTGATTGGAGA
CTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGT
TCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCG
ATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATTTGGGATACTGCTGG
TCAGGAACGTTACCGTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCG
GTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGACTTACGACAATGTC
AACCGGTGGTTGAAGGAACTCCGCGATCATGCCGACTCCAACATCGTTAT
CATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCA
CGGAAGAGGCCAAGCAATTCGCAAGTATGTTGGAACCTTCGCTGGCTTAG
GATGAAATGTGCTGGCGTGCTAACGTGCTACCAGGCGAGAACAACCTCTC
TTTCATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCC
AGAACATCCTGACAGGTTAGACTTGCCCCCGGTCCTCAGTTTACCAGACG
AATTCCGTCATGCTGACGTTCTTGTCACCTTTAGAAATCTACCGTATCGT
CTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCG
ACCGCCGCGACATGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAG
CAGGGATGCTGT
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Coding sequence (CDS) from alignment at ACJE01000004.1:1577728..1578939-

>ASPNIDRAFT_205975-T1 ID=ASPNIDRAFT_205975-T1|Name=ASPNIDRAFT_205975-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3165bp|location=Sequence derived from alignment at ACJE01000004.1:1577728..1578939- (Aspergillus niger ATCC 1015)
AAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGC
CAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGGA
GGACCCGAAGACCAAGCAGGGATGCTGTGCGAGAACAACCTCTCTTTCAT
CGAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACA
TCCTGACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTT
TTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCAT
CGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCA
AGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACC
TCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAG
TAAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCG
ATCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGAT
TTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAAT
TTCTCTTCAAAGATGGCTAACGACGAGTACGATAAATCTACCGTATCGTC
TCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGA
CCGCCGCGACATGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGC
AGGGATGCTGTGCGAGAACAACCTCTCTTTCATCGAGACATCTGCCCTTG
ACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGACAGTTGTCCTG
ATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTTCACCCG
TAACGAGTTCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGTTCGCTA
CCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATTTGGGAT
ACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCCGCTTACTATCGGGG
TGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGACTTACG
ACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATCATGCCGACTCCAAC
ATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCTGCGGGC
TGTGCCCACGGAAGAGGCCAAGCAATTCGCAATTTCTCTTCAAAGATGGC
TAACGACGAGTACGATAAATCTACCGTATCGTCTCCAGCAAGGCTCTGGA
TGGCGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACATGGTGC
GGATCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGTGCGAGA
ACAACCTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAG
CTTGCTTTCCAGAACATCCTGACAGTTGTCCTGATTGGAGACTCTGGTGT
TGGAAAGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGG
ACTCCAAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTC
GATTCCAAGACGATCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACG
TTACCGTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTC
TCGTCTACGATATCAGTAAGCACCAGACTTACGACAATGTCAACCGGTGG
TTGAAGGAACTCCGCGATCATGCCGACTCCAACATCGTTATCATGTTGGT
CGGTAACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGG
CCAAGCAATTCGCAATTTCTCTTCAAAGATGGCTAACGACGAGTACGATA
AATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCC
AGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGGAG
GACCCGAAGACCAAGCAGGGATGCTGTGCGAGAACAACCTCTCTTTCATC
GAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACAT
CCTGACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTT
TGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATC
GGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAA
GGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCT
CCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGT
AAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGA
TCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATT
TGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAATT
TCTCTTCAAAGATGGCTAACGACGAGTACGATAAATCTACCGTATCGTCT
CCAGCAAGGCTCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGAC
CGCCGCGACATGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGCA
GGGATGCTGTGCGAGAACAACCTCTCTTTCATCGAGACATCTGCCCTTGA
CGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGACAGTTGTCCTGA
TTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTTCACCCGT
AACGAGTTCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGTTCGCTAC
CCGCTCGATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATTTGGGATA
CTGCTGGTCAGGAACGTTACCGTGCCATCACCTCCGCTTACTATCGGGGT
GCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGACTTACGA
CAATGTCAACCGGTGGTTGAAGGAACTCCGCGATCATGCCGACTCCAACA
TCGTTATCATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCTGCGGGCT
GTGCCCACGGAAGAGGCCAAGCAATTCGCAATTTCTCTTCAAAGATGGCT
AACGACGAGTACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAB11AASPNIDRAFT_205975Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205975-T1ASPNIDRAFT_205975-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205975-T1.cdsASPNIDRAFT_205975-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205975-T1.exon6ASPNIDRAFT_205975-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205975-T1.exon5ASPNIDRAFT_205975-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205975-T1.exon4ASPNIDRAFT_205975-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205975-T1.exon3ASPNIDRAFT_205975-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205975-T1.exon2ASPNIDRAFT_205975-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205975-T1.exon1ASPNIDRAFT_205975-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205975-T1.utr5p2ASPNIDRAFT_205975-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_205975-T1.utr5p1ASPNIDRAFT_205975-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264HHW
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductRas- protein Rab-11A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1577728..1578939 -
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