You are here

Home

ASPNIDRAFT_205986-T1, ASPNIDRAFT_205986-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_205986-T1
Unique NameASPNIDRAFT_205986-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1542224..1543150+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_205986-T1 ID=ASPNIDRAFT_205986-T1|Name=ASPNIDRAFT_205986-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=927bp|location=Sequence derived from alignment at ACJE01000004.1:1542224..1543150+ (Aspergillus niger ATCC 1015)
ATGCTGGCCGCCGGTCAAAGGTTCCTTGACCAGGAACTTGGCGTAGGCCG
GTATCCTGACCCCGTTCATGCGTTCGTCCAGTTTCTACACATGGTTCACC
CTGGCCCGTCAATTATTACATGCACGCTTCTACGAGTGTCCAAGAAACAA
TCCGTCCTACAAGTTGAACTAGCGCGTGCCTCTAAGCCGGGAGAGGACTC
AGACTCCTATCCAACTACTACTCTCGGTATCTTCACATACGGCGATATTA
GCAAAGAAAATGGCCTGTCACAGGAAACGCGGCCGGTCATCACTCGGCCA
CCCCCCGACCGGCTCACTGAATGCGTTACTATCGACGACCCCGTCGTCAG
CTCAACTCCTGTGACCGCGAAGATGAACTGGGTCGCCCCACGATCTCCAC
AGGGACTCTGGGGCCACCGCCTCGGCGGCCACAACCGCGAGGTCTGGCTG
TCCTTCCGCGACGGCTCCAAACTATCTGACGTGTTACATCTGGCGTATCT
TTCAGACCTGGTAAGTCGCGGTTCTTCCCAACTTACTTCTGCTTGTGCTA
ATACGCCGCGTGCGGTAAGCCCCTGCAGCCACCAGCGACCCATATTCCGG
ATTTCTACGCTAAATATGCGATCTCCACCCTGTGTCTGTCGATCGAGTTC
AAAAGACGGCCCGACCCGTCCACCGACTGGGTCATGGTCCGCTCCAACTC
CAACAAGGTTTCCAATGGCCGGTATGATGCTGCTTTGCAACTATTAGATG
AGAGGGGCAATCTTCTCGCCTTGAGCAATCACGTTGTGTTTACCTCAGAC
TTGAAGCCCCGGCCGGCTCGGCTGTAAGTGTGGGGCCGTGGGTCTTTTGA
TTTCGAGCTTAGCGTCAAGTCATTTCTCACTGCAGTATGTGATAATAAAT
TCAAAAGCGAGGTGTTTTGTTCACGGA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:1542224..1543150+

>ASPNIDRAFT_205986-T1 ID=ASPNIDRAFT_205986-T1|Name=ASPNIDRAFT_205986-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1536bp|location=Sequence derived from alignment at ACJE01000004.1:1542224..1543150+ (Aspergillus niger ATCC 1015)
ATGCTGGCCGCCGGTCAAAGGTTCCTTGACCAGGAACTTGGCGTAGGCCG
GTATCCTGACCCCGTTCATGCGTTCGTCCAGTTTCTACACATGGTTCACC
CTGGCCCGTCAATTATTACATGCACGCTTCTACGAGTGTCCAAGAAACAA
TCCGTCCTACAAGTTGAACTAGCGCGTGCCTCTAAGCCGGGAGAGGACTC
AGACTCCTATCCAACTACTACTCTCGGTATCTTCACATACGGCGATATTA
GCAAAGAAAATGGCCTGTCACAGGAAACGCGGCCGGTCATCACTCGGCCA
CCCCCCGACCGGCTCACTGAATGCGTTACTATCGACGACCCCGTCGTCAG
CTCAACTCCTGTGACCGCGAAGATGAACTGGGTCGCCCCACGATCTCCAC
AGGGACTCTGGGGCCACCGCCTCGGCGGCCACAACCGCGAGGTCTGGCTG
TCCTTCCGCGACGGCTCCAAACTATCTGACGTGTTACATCTGGCGTATCT
TTCAGACCTGCCCCTGCAGCCACCAGCGACCCATATTCCGGATTTCTACG
CTAAATATGCGATCTCCACCCTGTGTCTGTCGATCGAGTTCAAAAGACGG
CCCGACCCGTCCACCGACTGGGTCATGGTCCGCTCCAACTCCAACAAGGT
TTCCAATGGCCGGTATGATGCTGCTTTGCAACTATTAGATGAGAGGGGCA
ATCTTCTCGCCTTGAGCAATCACGTTGTGTTTACCTCAGACTTGAAGCCC
CGGCCGGCTCGGCTGTAAATGCTGGCCGCCGGTCAAAGGTTCCTTGACCA
GGAACTTGGCGTAGGCCGGTATCCTGACCCCGTTCATGCGTTCGTCCAGT
TTCTACACATGGTTCACCCTGGCCCGTCAATTATTACATGCACGCTTCTA
CGAGTGTCCAAGAAACAATCCGTCCTACAAGTTGAACTAGCGCGTGCCTC
TAAGCCGGGAGAGGACTCAGACTCCTATCCAACTACTACTCTCGGTATCT
TCACATACGGCGATATTAGCAAAGAAAATGGCCTGTCACAGGAAACGCGG
CCGGTCATCACTCGGCCACCCCCCGACCGGCTCACTGAATGCGTTACTAT
CGACGACCCCGTCGTCAGCTCAACTCCTGTGACCGCGAAGATGAACTGGG
TCGCCCCACGATCTCCACAGGGACTCTGGGGCCACCGCCTCGGCGGCCAC
AACCGCGAGGTCTGGCTGTCCTTCCGCGACGGCTCCAAACTATCTGACGT
GTTACATCTGGCGTATCTTTCAGACCTGCCCCTGCAGCCACCAGCGACCC
ATATTCCGGATTTCTACGCTAAATATGCGATCTCCACCCTGTGTCTGTCG
ATCGAGTTCAAAAGACGGCCCGACCCGTCCACCGACTGGGTCATGGTCCG
CTCCAACTCCAACAAGGTTTCCAATGGCCGGTATGATGCTGCTTTGCAAC
TATTAGATGAGAGGGGCAATCTTCTCGCCTTGAGCAATCACGTTGTGTTT
ACCTCAGACTTGAAGCCCCGGCCGGCTCGGCTGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205986ASPNIDRAFT_205986Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205986-T1.exon1ASPNIDRAFT_205986-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_205986-T1.exon2ASPNIDRAFT_205986-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205986-T1.cdsASPNIDRAFT_205986-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205986-T1.utr3p1ASPNIDRAFT_205986-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_205986-T1ASPNIDRAFT_205986-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029069
DBxrefInterPro:IPR042171
DBxrefPFAM:PF13622
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1542224..1543150 +
Powered by Drupal