You are here

Home

ASPNIDRAFT_206033-T1, ASPNIDRAFT_206033-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206033-T1
Unique NameASPNIDRAFT_206033-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1422096..1423845-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206033-T1 ID=ASPNIDRAFT_206033-T1|Name=ASPNIDRAFT_206033-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1750bp|location=Sequence derived from alignment at ACJE01000004.1:1422096..1423845- (Aspergillus niger ATCC 1015)
GGCTGATTGTGGGTTCTTCTTCTCTCCTCTCCTCCCTTGCCTCCCTTGAT
TCGGTCTCCTGGTTCCGTGGTCATTCTTCAACCCTATCGATTGTCGGTCT
TGCATATCACTTGCCCGTCACTTGACCTCGACCAGACTGGTGGGTATGTA
TCTTCGCTGCTGTCGCACCATGGTAGCCGATTATATAGTACTCCCCCCCC
GTACCCGCCGGTCCGTTGCTGACCTCGTTGCAGCTTGTCTACTTTAATCA
AGTCCCTGAGTCCTCGGATCCGTCTCTGTGTAGAGACAATCCTTGTGCTA
GCCATCCCACATTCCTCGGCTCGGTCCTCGCGGAAGGAGAAACCCCCGCC
ATTGTCACACCGACATCATCGGTCCATTGTGTCCGAGGAGAGGTTCAGTA
CGACCTGAGATAGCGGCGCATTGCAACTAAGATGGCCAGCGACAGCAAGC
CTGAAGTGTTCGAAGATGCTGGCGTGGCCGTGCCGGCCACGGCCAAGCCC
AGCTTTGGGGCTCGCGTGGCTAGACACTTCAAGCGATGGTGGTGGGTGTA
TATCATTGCCTTGATCGTGATTGTTCTTGTGGTGGTGCTTCCTGTGTAAG
TTTCCTATCATGACAAAAGATGCCCCCCTCCACCCCCTATCTATTTCCGG
TCTCCGACTTACATGACAAACGTGGGAAAACAGAGTTTACGTCGGATACC
CCAAGATGGCTCAACACATCGTCAGTGATTCCAACCTGACCGTCACATCG
ATGGTCATCAGTGACCCCTCACCTTCATCCTTCGACCTCCACCAGCTGCA
GGTCATTGGGTCCAACAGCTCTTTTCACCCAACCTTCTACACTTTCTCCG
CAGCTATCAGCCTGCTGGGTTCCGCTGTCTTCACACACGTTCAGGTGCCC
CAGTTCAACGGCCACAATGGCGTTGTCATCGACGTCAACCAGCGTGCGAA
CCTGACGAACGAAACGGCATTCGCTGAGTTCTGCAAGGCCGCCATAATGA
ACGAGAAGTTCCCTCTCAACGTCTACGGCAAGCCCCAGCTAAAAGAGGGA
AGTCTACCCAAGACCACGGTCACCTACAACAAGACCGCCATGGTGACAGG
TAAGCTCGCTCATTCCCCTCATCTGAAAATTACCCTTCACAACCCACTAA
CCCATAATTTTCGGCCTAGGCCTCAACAAGCTCTCGGGCTTTGATCTCGT
GGACATGTCAATTGGAACCAACAACACAGACGGCACCAACGCCAAAGGAA
CCGTCTACATCCCCAACCCCTCCGACATTAGCATCGCCGTGGTATGCATA
TCCCCCACCTTCCCCTAATCCACCATAGTCAGCATCCAACTAACCCCACA
TCCAACAGGGCAACCTGACTCTCAACCTGGAGGTCAATAACACCGCCATC
GGCCAAGCCTTCATCTACGACCTCACCATCGGCCCAGGCAACAATACCGT
CCCCATGACCGCCAACGTCAGCACCCTCACCGTCGCCGGCATGCTAAGCA
GCTACCCGGACTACATGCTCCCCATCGACATCACAGGCAACTCGAGCATC
TACAACAACCAGCCCCTCCTCTACATTGAAGAAGCGCTGGCGTCGCTCAA
ACTTCAAGTTCAATTGAACGTGACGCAGGCATTGGGCGGTTGAGCTAGCC
TAAGGCTTGTCAATCAGACAGTCGGTCTCGTCTCTAAATAAAAGTCTGTA
ATTTTGTTTAACGGACTGACGGATTCTATATCCTCTTGTTTGTGGGATAT
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:1422096..1423845-

>ASPNIDRAFT_206033-T1 ID=ASPNIDRAFT_206033-T1|Name=ASPNIDRAFT_206033-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4980bp|location=Sequence derived from alignment at ACJE01000004.1:1422096..1423845- (Aspergillus niger ATCC 1015)
ACAGTCGGTCTCGTCTCTAAATAAGGCAACCTGACTCTCAACCTGGAGGT
CAATAACACCGCCATCGGCCAAGCCTTCATCTACGACCTCACCATCGGCC
CAGGCAACAATACCGTCCCCATGACCGCCAACGTCAGCACCCTCACCGTC
GCCGGCATGCTAAGCAGCTACCCGGACTACATGCTCCCCATCGACATCAC
AGGCAACTCGAGCATCTACAACAACCAGCCCCTCCTCTACATTGAAGAAG
CGCTGGCGTCGCTCAAACTTCAAGTTCAATTGAACGTGACGCAGGCCTCA
ACAAGCTCTCGGGCTTTGATCTCGTGGACATGTCAATTGGAACCAACAAC
ACAGACGGCACCAACGCCAAAGGAACCGTCTACATCCCCAACCCCTCCGA
CATTAGCATCGCCGTGAGTTTACGTCGGATACCCCAAGATGGCTCAACAC
ATCGTCAGTGATTCCAACCTGACCGTCACATCGATGGTCATCAGTGACCC
CTCACCTTCATCCTTCGACCTCCACCAGCTGCAGGTCATTGGGTCCAACA
GCTCTTTTCACCCAACCTTCTACACTTTCTCCGCAGCTATCAGCCTGCTG
GGTTCCGCTGTCTTCACACACGTTCAGGTGCCCCAGTTCAACGGCCACAA
TGGCGTTGTCATCGACGTCAACCAGCGTGCGAACCTGACGAACGAAACGG
CATTCGCTGAGTTCTGCAAGGCCGCCATAATGAACGAGAAGTTCCCTCTC
AACGTCTACGGCAAGCCCCAGCTAAAAGAGGGAAGTCTACCCAAGACCAC
GGTCACCTACAACAAGACCGCCATGGTGACAGATGGCCAGCGACAGCAAG
CCTGAAGTGTTCGAAGATGCTGGCGTGGCCGTGCCGGCCACGGCCAAGCC
CAGCTTTGGGGCTCGCGTGGCTAGACACTTCAAGCGATGGTGGTGGGTGT
ATATCATTGCCTTGATCGTGATTGTTCTTGTGGTGGTGCTTCCTGTACAG
TCGGTCTCGTCTCTAAATAAGGCAACCTGACTCTCAACCTGGAGGTCAAT
AACACCGCCATCGGCCAAGCCTTCATCTACGACCTCACCATCGGCCCAGG
CAACAATACCGTCCCCATGACCGCCAACGTCAGCACCCTCACCGTCGCCG
GCATGCTAAGCAGCTACCCGGACTACATGCTCCCCATCGACATCACAGGC
AACTCGAGCATCTACAACAACCAGCCCCTCCTCTACATTGAAGAAGCGCT
GGCGTCGCTCAAACTTCAAGTTCAATTGAACGTGACGCAGGCCTCAACAA
GCTCTCGGGCTTTGATCTCGTGGACATGTCAATTGGAACCAACAACACAG
ACGGCACCAACGCCAAAGGAACCGTCTACATCCCCAACCCCTCCGACATT
AGCATCGCCGTGAGTTTACGTCGGATACCCCAAGATGGCTCAACACATCG
TCAGTGATTCCAACCTGACCGTCACATCGATGGTCATCAGTGACCCCTCA
CCTTCATCCTTCGACCTCCACCAGCTGCAGGTCATTGGGTCCAACAGCTC
TTTTCACCCAACCTTCTACACTTTCTCCGCAGCTATCAGCCTGCTGGGTT
CCGCTGTCTTCACACACGTTCAGGTGCCCCAGTTCAACGGCCACAATGGC
GTTGTCATCGACGTCAACCAGCGTGCGAACCTGACGAACGAAACGGCATT
CGCTGAGTTCTGCAAGGCCGCCATAATGAACGAGAAGTTCCCTCTCAACG
TCTACGGCAAGCCCCAGCTAAAAGAGGGAAGTCTACCCAAGACCACGGTC
ACCTACAACAAGACCGCCATGGTGACAGATGGCCAGCGACAGCAAGCCTG
AAGTGTTCGAAGATGCTGGCGTGGCCGTGCCGGCCACGGCCAAGCCCAGC
TTTGGGGCTCGCGTGGCTAGACACTTCAAGCGATGGTGGTGGGTGTATAT
CATTGCCTTGATCGTGATTGTTCTTGTGGTGGTGCTTCCTGTACAGTCGG
TCTCGTCTCTAAATAAGGCAACCTGACTCTCAACCTGGAGGTCAATAACA
CCGCCATCGGCCAAGCCTTCATCTACGACCTCACCATCGGCCCAGGCAAC
AATACCGTCCCCATGACCGCCAACGTCAGCACCCTCACCGTCGCCGGCAT
GCTAAGCAGCTACCCGGACTACATGCTCCCCATCGACATCACAGGCAACT
CGAGCATCTACAACAACCAGCCCCTCCTCTACATTGAAGAAGCGCTGGCG
TCGCTCAAACTTCAAGTTCAATTGAACGTGACGCAGGCCTCAACAAGCTC
TCGGGCTTTGATCTCGTGGACATGTCAATTGGAACCAACAACACAGACGG
CACCAACGCCAAAGGAACCGTCTACATCCCCAACCCCTCCGACATTAGCA
TCGCCGTGAGTTTACGTCGGATACCCCAAGATGGCTCAACACATCGTCAG
TGATTCCAACCTGACCGTCACATCGATGGTCATCAGTGACCCCTCACCTT
CATCCTTCGACCTCCACCAGCTGCAGGTCATTGGGTCCAACAGCTCTTTT
CACCCAACCTTCTACACTTTCTCCGCAGCTATCAGCCTGCTGGGTTCCGC
TGTCTTCACACACGTTCAGGTGCCCCAGTTCAACGGCCACAATGGCGTTG
TCATCGACGTCAACCAGCGTGCGAACCTGACGAACGAAACGGCATTCGCT
GAGTTCTGCAAGGCCGCCATAATGAACGAGAAGTTCCCTCTCAACGTCTA
CGGCAAGCCCCAGCTAAAAGAGGGAAGTCTACCCAAGACCACGGTCACCT
ACAACAAGACCGCCATGGTGACAGATGGCCAGCGACAGCAAGCCTGAAGT
GTTCGAAGATGCTGGCGTGGCCGTGCCGGCCACGGCCAAGCCCAGCTTTG
GGGCTCGCGTGGCTAGACACTTCAAGCGATGGTGGTGGGTGTATATCATT
GCCTTGATCGTGATTGTTCTTGTGGTGGTGCTTCCTGTACAGTCGGTCTC
GTCTCTAAATAAGGCAACCTGACTCTCAACCTGGAGGTCAATAACACCGC
CATCGGCCAAGCCTTCATCTACGACCTCACCATCGGCCCAGGCAACAATA
CCGTCCCCATGACCGCCAACGTCAGCACCCTCACCGTCGCCGGCATGCTA
AGCAGCTACCCGGACTACATGCTCCCCATCGACATCACAGGCAACTCGAG
CATCTACAACAACCAGCCCCTCCTCTACATTGAAGAAGCGCTGGCGTCGC
TCAAACTTCAAGTTCAATTGAACGTGACGCAGGCCTCAACAAGCTCTCGG
GCTTTGATCTCGTGGACATGTCAATTGGAACCAACAACACAGACGGCACC
AACGCCAAAGGAACCGTCTACATCCCCAACCCCTCCGACATTAGCATCGC
CGTGAGTTTACGTCGGATACCCCAAGATGGCTCAACACATCGTCAGTGAT
TCCAACCTGACCGTCACATCGATGGTCATCAGTGACCCCTCACCTTCATC
CTTCGACCTCCACCAGCTGCAGGTCATTGGGTCCAACAGCTCTTTTCACC
CAACCTTCTACACTTTCTCCGCAGCTATCAGCCTGCTGGGTTCCGCTGTC
TTCACACACGTTCAGGTGCCCCAGTTCAACGGCCACAATGGCGTTGTCAT
CGACGTCAACCAGCGTGCGAACCTGACGAACGAAACGGCATTCGCTGAGT
TCTGCAAGGCCGCCATAATGAACGAGAAGTTCCCTCTCAACGTCTACGGC
AAGCCCCAGCTAAAAGAGGGAAGTCTACCCAAGACCACGGTCACCTACAA
CAAGACCGCCATGGTGACAGATGGCCAGCGACAGCAAGCCTGAAGTGTTC
GAAGATGCTGGCGTGGCCGTGCCGGCCACGGCCAAGCCCAGCTTTGGGGC
TCGCGTGGCTAGACACTTCAAGCGATGGTGGTGGGTGTATATCATTGCCT
TGATCGTGATTGTTCTTGTGGTGGTGCTTCCTGTACAGTCGGTCTCGTCT
CTAAATAAGGCAACCTGACTCTCAACCTGGAGGTCAATAACACCGCCATC
GGCCAAGCCTTCATCTACGACCTCACCATCGGCCCAGGCAACAATACCGT
CCCCATGACCGCCAACGTCAGCACCCTCACCGTCGCCGGCATGCTAAGCA
GCTACCCGGACTACATGCTCCCCATCGACATCACAGGCAACTCGAGCATC
TACAACAACCAGCCCCTCCTCTACATTGAAGAAGCGCTGGCGTCGCTCAA
ACTTCAAGTTCAATTGAACGTGACGCAGGCCTCAACAAGCTCTCGGGCTT
TGATCTCGTGGACATGTCAATTGGAACCAACAACACAGACGGCACCAACG
CCAAAGGAACCGTCTACATCCCCAACCCCTCCGACATTAGCATCGCCGTG
AGTTTACGTCGGATACCCCAAGATGGCTCAACACATCGTCAGTGATTCCA
ACCTGACCGTCACATCGATGGTCATCAGTGACCCCTCACCTTCATCCTTC
GACCTCCACCAGCTGCAGGTCATTGGGTCCAACAGCTCTTTTCACCCAAC
CTTCTACACTTTCTCCGCAGCTATCAGCCTGCTGGGTTCCGCTGTCTTCA
CACACGTTCAGGTGCCCCAGTTCAACGGCCACAATGGCGTTGTCATCGAC
GTCAACCAGCGTGCGAACCTGACGAACGAAACGGCATTCGCTGAGTTCTG
CAAGGCCGCCATAATGAACGAGAAGTTCCCTCTCAACGTCTACGGCAAGC
CCCAGCTAAAAGAGGGAAGTCTACCCAAGACCACGGTCACCTACAACAAG
ACCGCCATGGTGACAGATGGCCAGCGACAGCAAGCCTGAAGTGTTCGAAG
ATGCTGGCGTGGCCGTGCCGGCCACGGCCAAGCCCAGCTTTGGGGCTCGC
GTGGCTAGACACTTCAAGCGATGGTGGTGGGTGTATATCATTGCCTTGAT
CGTGATTGTTCTTGTGGTGGTGCTTCCTGT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206033ASPNIDRAFT_206033Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206033-T1ASPNIDRAFT_206033-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206033-T1.cdsASPNIDRAFT_206033-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206033-T1.utr3p1ASPNIDRAFT_206033-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206033-T1.exon6ASPNIDRAFT_206033-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206033-T1.exon5ASPNIDRAFT_206033-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206033-T1.exon4ASPNIDRAFT_206033-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206033-T1.exon3ASPNIDRAFT_206033-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206033-T1.exon2ASPNIDRAFT_206033-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206033-T1.exon1ASPNIDRAFT_206033-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206033-T1.utr5p2ASPNIDRAFT_206033-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_206033-T1.utr5p1ASPNIDRAFT_206033-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR022185
DBxrefPFAM:PF12505
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1422096..1423845 -
Powered by Drupal