You are here

ASPNIDRAFT_206127-T1, ASPNIDRAFT_206127-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206127-T1
Unique NameASPNIDRAFT_206127-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1138150..1138910-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206127-T1 ID=ASPNIDRAFT_206127-T1|Name=ASPNIDRAFT_206127-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=761bp|location=Sequence derived from alignment at ACJE01000004.1:1138150..1138910- (Aspergillus niger ATCC 1015)
CTATATTTCATATCTCAATACAGCATACAACAAGCACATACCATCATGGA GACCGATCCCGGATTCATCGCTGCTGTGGAAGAAGCCAAGCAAGGCGCTG CTGAGGGTGGTGTGCCCATTGGAGCTTGTTTGGTCTCCAAGGATGGCAAG ATTCTAGGCCGCGGCCACAATATGCGCGTCCAGAAGGGTAGTCCCGTGTT GCATGTTCGTTGATCCCATCCCTTGCCTTCTGAGGGTCGTCTGGGGTTCT AATTCTAATCTCTACCGTCATAGGCTGAGATGTCCGCGCTCGAGAACTCC GGTCGTCTGCCCGCTTCGGCCTACGAAGGCGCTACTATGTACACGACCCT GTCGCCATGCGACATGTGCACCGGTGCCTGCATCCTCTACAAGGTTAAGC GCGTTGTTGTGGGCGAGAACAAGAGCTTCATGGGTGGCGAGGACTATCTT AAGAGCCGTGGGAAGGAGGTTGTGGTTTTGGATAATGCAGAGTGTAAGCA GCTGATGGAGAAGTTCATGAAGGAGAAGCCGGAGCTTTGGTAGGTTTCCC ATGCATCTCACTGGACTGGTCTAGTCTTTTGTTGGAATGTACGCTGACTG TACGATGTCTTTGCAGGAATGAGGACATTTCCGTCTGAGCTTTTGAATTC GTGAAGGTGTCAACTATATTGCTGGCTAGGCTCTCATGTACATAATAAAG AATTGAAAGCTAGTTCTGGTCGCATTGAGCACCCAATTTAGACCGTCAGA CGGTGGATCTC
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:1138150..1138910-

>ASPNIDRAFT_206127-T1 ID=ASPNIDRAFT_206127-T1|Name=ASPNIDRAFT_206127-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1341bp|location=Sequence derived from alignment at ACJE01000004.1:1138150..1138910- (Aspergillus niger ATCC 1015)
GAATGAGGACATTTCCGTCTGAGCTGAGATGTCCGCGCTCGAGAACTCCG
GTCGTCTGCCCGCTTCGGCCTACGAAGGCGCTACTATGTACACGACCCTG
TCGCCATGCGACATGTGCACCGGTGCCTGCATCCTCTACAAGGTTAAGCG
CGTTGTTGTGGGCGAGAACAAGAGCTTCATGGGTGGCGAGGACTATCTTA
AGAGCCGTGGGAAGGAGGTTGTGGTTTTGGATAATGCAGAGTGTAAGCAG
CTGATGGAGAAGTTCATGAAGGAGAAGCCGGAGCTTTGATGGAGACCGAT
CCCGGATTCATCGCTGCTGTGGAAGAAGCCAAGCAAGGCGCTGCTGAGGG
TGGTGTGCCCATTGGAGCTTGTTTGGTCTCCAAGGATGGCAAGATTCTAG
GCCGCGGCCACAATATGCGCGTCCAGAAGGGTAGTCCCGTGTTGCATGAA
TGAGGACATTTCCGTCTGAGCTGAGATGTCCGCGCTCGAGAACTCCGGTC
GTCTGCCCGCTTCGGCCTACGAAGGCGCTACTATGTACACGACCCTGTCG
CCATGCGACATGTGCACCGGTGCCTGCATCCTCTACAAGGTTAAGCGCGT
TGTTGTGGGCGAGAACAAGAGCTTCATGGGTGGCGAGGACTATCTTAAGA
GCCGTGGGAAGGAGGTTGTGGTTTTGGATAATGCAGAGTGTAAGCAGCTG
ATGGAGAAGTTCATGAAGGAGAAGCCGGAGCTTTGATGGAGACCGATCCC
GGATTCATCGCTGCTGTGGAAGAAGCCAAGCAAGGCGCTGCTGAGGGTGG
TGTGCCCATTGGAGCTTGTTTGGTCTCCAAGGATGGCAAGATTCTAGGCC
GCGGCCACAATATGCGCGTCCAGAAGGGTAGTCCCGTGTTGCATGAATGA
GGACATTTCCGTCTGAGCTGAGATGTCCGCGCTCGAGAACTCCGGTCGTC
TGCCCGCTTCGGCCTACGAAGGCGCTACTATGTACACGACCCTGTCGCCA
TGCGACATGTGCACCGGTGCCTGCATCCTCTACAAGGTTAAGCGCGTTGT
TGTGGGCGAGAACAAGAGCTTCATGGGTGGCGAGGACTATCTTAAGAGCC
GTGGGAAGGAGGTTGTGGTTTTGGATAATGCAGAGTGTAAGCAGCTGATG
GAGAAGTTCATGAAGGAGAAGCCGGAGCTTTGATGGAGACCGATCCCGGA
TTCATCGCTGCTGTGGAAGAAGCCAAGCAAGGCGCTGCTGAGGGTGGTGT
GCCCATTGGAGCTTGTTTGGTCTCCAAGGATGGCAAGATTCTAGGCCGCG
GCCACAATATGCGCGTCCAGAAGGGTAGTCCCGTGTTGCAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206127ASPNIDRAFT_206127Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206127-T1ASPNIDRAFT_206127-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206127-T1.cdsASPNIDRAFT_206127-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206127-T1.utr3p1ASPNIDRAFT_206127-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206127-T1.exon3ASPNIDRAFT_206127-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206127-T1.exon2ASPNIDRAFT_206127-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206127-T1.exon1ASPNIDRAFT_206127-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206127-T1.utr5p1ASPNIDRAFT_206127-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016193
DBxrefInterPro:IPR002125
DBxrefPFAM:PF14437
DBxrefPFAM:PF00383
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1138150..1138910 -