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ASPNIDRAFT_206151-T1, ASPNIDRAFT_206151-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206151-T1
Unique NameASPNIDRAFT_206151-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1092427..1093641+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206151-T1 ID=ASPNIDRAFT_206151-T1|Name=ASPNIDRAFT_206151-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1215bp|location=Sequence derived from alignment at ACJE01000004.1:1092427..1093641+ (Aspergillus niger ATCC 1015)
CCATTTGGCCCATTTTGCACCCTGCCTCGTGCTGCTACCCGATCCGCAAA
TCCATAGTCTGAGGTTCTGAGTCGATTTTCACCATGTGGCTCATTAACTG
GTGTAGGTAGTCTCCTGTTTTGCCATCCGCCGACTTGGCCCCGATCAGGT
GGTCTGCAGACCTGCCCTGCACGCTCTTGGATCCATTGGATCCTCATCGT
TTCTCTTCTGTTCACAGTGTCTCTCGTATGCCAATTTACTGATTTATCTT
TTCCGAATAGTCTACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCA
CGCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCC
TGCACATGCTGAAGGTATGTGAGCTTCCTTTAGTCGCAGACAAGCTCTGC
TTTGATGGCAACAATGGTGGATATGGTATCGCCTGGGATCGACTCCGATC
GCAAGGGAATGCCACCACGGCAGGGATAGAGCCGCGAGAGATGTGGACGA
TAAGCTAACATCTGTGTTTGATAATAGAACGACCGGGTTGCCATCCTCCA
GCCCACTGCTCACCCGAGTACGTATCACCCGCACGAACATGCCAGCGAGG
GACTATTCGACAGCGACCGAGGAGAATCGATTTTCATGAACATGGGCTAA
CCGCACTCCTTGAATACAGCATCCGAAGAACTCGCCATCGGCAACAACCG
CTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGGTGAGTAACACACCT
CGTAGCCCCGTGGTATAGATCGAAACAAGAAAACTAAATGTAGCAATTCT
TGTTAAATAGCTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCGG
TATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCCA
AGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCCT
TTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGGA
TGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAGG
TTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGTC
ATGAGACAGGGTGAGTGGGATTTTTCATATCCAAACCAATGTCGACCAGG
AGCTAATCGTTCTGTGCCTTGTAGGATACGGTGAAGGTATCAGATGGCTG
TCTCAATACGTCTAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:1092427..1093641+

>ASPNIDRAFT_206151-T1 ID=ASPNIDRAFT_206151-T1|Name=ASPNIDRAFT_206151-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3420bp|location=Sequence derived from alignment at ACJE01000004.1:1092427..1093641+ (Aspergillus niger ATCC 1015)
ATGTGGCTCATTAACTGGTTCTACGATCTCCTGGCCTCCCTTGGCCTGCT
CAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGA
CGACCCTCCTGCACATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCC
ACTGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACAACCGCTTCAC
GACCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACT
ACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCAC
GAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGA
GGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACC
CGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAG
ACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGT
GTTCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAAGGTATCAGAT
GGCTGTCTCAATACGTCTAAATGTGGCTCATTAACTGGTTCTACGATCTC
CTGGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGG
TCTCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTGAAGAACGACC
GGGTTGCCATCCTCCAGCCCACTGCTCACCCGACATCCGAAGAACTCGCC
ATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGC
TCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCC
TCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTC
GACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCT
CGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCC
ACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAG
GGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGG
ATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTAAATGTGGCTCA
TTAACTGGTTCTACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCAC
GCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCT
GCACATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACC
CGACATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGACCTTCGAC
CTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACTACTTCCCCGA
AGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCC
CCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCT
AAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGT
TAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTA
AGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGC
AGTGTTGTCATGAGACAGGGATACGGTGAAGGTATCAGATGGCTGTCTCA
ATACGTCTAAATGTGGCTCATTAACTGGTTCTACGATCTCCTGGCCTCCC
TTGGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAAT
GCCGGAAAGACGACCCTCCTGCACATGCTGAAGAACGACCGGGTTGCCAT
CCTCCAGCCCACTGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACA
ACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTG
TGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGC
CAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCC
TTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAG
ATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGG
ATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGC
CCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAA
GGTATCAGATGGCTGTCTCAATACGTCTAAATGTGGCTCATTAACTGGTT
CTACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCC
TGTTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTG
AAGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGACATCCGA
AGAACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTC
ACCAGCAGGCTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCGGT
ATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCCAA
GGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCCTT
TCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGGAT
GAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAGGT
TCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGTCA
TGAGACAGGGATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTAA
ATGTGGCTCATTAACTGGTTCTACGATCTCCTGGCCTCCCTTGGCCTGCT
CAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGA
CGACCCTCCTGCACATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCC
ACTGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACAACCGCTTCAC
GACCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACT
ACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCAC
GAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGA
GGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACC
CGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAG
ACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGT
GTTCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAAGGTATCAGAT
GGCTGTCTCAATACGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SAR1ASPNIDRAFT_206151Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206151-T1ASPNIDRAFT_206151-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206151-T1.utr5p1ASPNIDRAFT_206151-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206151-T1.exon1ASPNIDRAFT_206151-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206151-T1.exon2ASPNIDRAFT_206151-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206151-T1.exon3ASPNIDRAFT_206151-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206151-T1.exon4ASPNIDRAFT_206151-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206151-T1.exon5ASPNIDRAFT_206151-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206151-T1.exon6ASPNIDRAFT_206151-T1.exon6Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206151-T1.cdsASPNIDRAFT_206151-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006687
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductCOPII coat GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1092427..1093641 +
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