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ASPNIDRAFT_206235-T1, ASPNIDRAFT_206235-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206235-T1
Unique NameASPNIDRAFT_206235-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:894016..895413+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206235-T1 ID=ASPNIDRAFT_206235-T1|Name=ASPNIDRAFT_206235-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1398bp|location=Sequence derived from alignment at ACJE01000004.1:894016..895413+ (Aspergillus niger ATCC 1015)
CAAGCACTCAACTCCTTACGACCAACCCAACGACCCTTGCCCGCTGCGTT
CCTGGTGAAGGGCTGCAGGATTAGAGGTGAGTTTGTTGCAATTAATCCGT
CGTGATTTCGATCCCTCTCGATTTTTCCCGCGTCGTCGACGGTCGGTGTG
CGCGTGCAATCTACGATCGGTCTCGAACTTGAATTGGAAGATACACATTC
CGGGGTATATCGAAGAGGAAGAGAGAAAAAGAAGAAAGATTATCAGAGCA
GTTGTTTGGTGCAAGGGAATATAAGCGGCGGCGACGACGACGATTGAAAA
GAAAGAACAACTCAAGAAAGAATTTTTTTCTTCGCTTTCTCGTCCATACC
CGAGTTCGCACACATTTCCAGCATCGAGCATCGCCACACACACACAACAC
CATTCAATTCAATTCAAATCGACTCGACAATCGCACGAACAAACCTAAGA
CCATCGACGCATCGGGGCAAAAATTTCTCGAAGAGGGATTGACAATCACC
GACAACAGTCTACTGCTTATTGCTACTGTCTTTTGTGGCGAGCAATCCCC
GCTAATACTTCTGCCATCTACAGTCCCCTCGAACAGCAAACATGGGTATC
TCACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGCGAAGAGGGCCAC
CTACCGCAAGAAGAGGTATGCATGAGTTCCTATTGTCTTTCTTACTCAAC
CAACTACACTACGAAAGAAACAACGACTGACGCACGGCAATTCAACAGGG
CGTTCGAGAAGGGTCGCCAGCCCTCCAACACCCGTATCGGAACCAAGAGA
ATCCACCTGGTCCGCACCCGTGGTGGTAACCAGAAGTTCCGTGCCCTTCG
TCTCGAATCCGGCAACTTCTCGTGGGGTTCTGAGGGTATCTCCCGCAAGA
CCCGTGTCATCGTTGTGGCCTACCACCCCTCCAACAACGAACTGGTCCGC
ACCAACACCCTGACCAAGTCGGCCGTCGTTCAGATCGATGCTGCTCCTTT
CCGTCAATGGTACGAGGCCCACTACGGCCAGCCTATCGGCCGCCGTCGCC
AGCAGAAGACCGAGACCACCGAGGAGAAGAAGTCCAACAGCGTTGTGAAG
AAGCAGGCTGCTCGCTTTGCTGAGCAGGGCAAGGTCGAGTCTGCCGTCGA
GCGTCAGTTCGAGTCCGGACGTCTGTACGCTGTTGTGTCGTCCCGCCCCG
GCCAGAGCGGCCGCGTGGACGGATACATCCTGGAGGGTGAGGAGCTGGCT
TTCTACCAGCGTGCTATCCGCAAGTAAAGAAATCATACACACAAAAGCGA
ATAGTTACGTTGTGTTGTTAAGTTAAAAGGGCTGGATGGATCGGAGTTAG
CATTTTCCAGAAAATTAGCTCTGAATTGATGGATGAATCAGATGTTCA
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Coding sequence (CDS) from alignment at ACJE01000004.1:894016..895413+

>ASPNIDRAFT_206235-T1 ID=ASPNIDRAFT_206235-T1|Name=ASPNIDRAFT_206235-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1206bp|location=Sequence derived from alignment at ACJE01000004.1:894016..895413+ (Aspergillus niger ATCC 1015)
ATGGGTATCTCACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGCGAA
GAGGGCCACCTACCGCAAGAAGAGGGCGTTCGAGAAGGGTCGCCAGCCCT
CCAACACCCGTATCGGAACCAAGAGAATCCACCTGGTCCGCACCCGTGGT
GGTAACCAGAAGTTCCGTGCCCTTCGTCTCGAATCCGGCAACTTCTCGTG
GGGTTCTGAGGGTATCTCCCGCAAGACCCGTGTCATCGTTGTGGCCTACC
ACCCCTCCAACAACGAACTGGTCCGCACCAACACCCTGACCAAGTCGGCC
GTCGTTCAGATCGATGCTGCTCCTTTCCGTCAATGGTACGAGGCCCACTA
CGGCCAGCCTATCGGCCGCCGTCGCCAGCAGAAGACCGAGACCACCGAGG
AGAAGAAGTCCAACAGCGTTGTGAAGAAGCAGGCTGCTCGCTTTGCTGAG
CAGGGCAAGGTCGAGTCTGCCGTCGAGCGTCAGTTCGAGTCCGGACGTCT
GTACGCTGTTGTGTCGTCCCGCCCCGGCCAGAGCGGCCGCGTGGACGGAT
ACATCCTGGAGGGTGAGGAGCTGGCTTTCTACCAGCGTGCTATCCGCAAG
TAAATGGGTATCTCACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGC
GAAGAGGGCCACCTACCGCAAGAAGAGGGCGTTCGAGAAGGGTCGCCAGC
CCTCCAACACCCGTATCGGAACCAAGAGAATCCACCTGGTCCGCACCCGT
GGTGGTAACCAGAAGTTCCGTGCCCTTCGTCTCGAATCCGGCAACTTCTC
GTGGGGTTCTGAGGGTATCTCCCGCAAGACCCGTGTCATCGTTGTGGCCT
ACCACCCCTCCAACAACGAACTGGTCCGCACCAACACCCTGACCAAGTCG
GCCGTCGTTCAGATCGATGCTGCTCCTTTCCGTCAATGGTACGAGGCCCA
CTACGGCCAGCCTATCGGCCGCCGTCGCCAGCAGAAGACCGAGACCACCG
AGGAGAAGAAGTCCAACAGCGTTGTGAAGAAGCAGGCTGCTCGCTTTGCT
GAGCAGGGCAAGGTCGAGTCTGCCGTCGAGCGTCAGTTCGAGTCCGGACG
TCTGTACGCTGTTGTGTCGTCCCGCCCCGGCCAGAGCGGCCGCGTGGACG
GATACATCCTGGAGGGTGAGGAGCTGGCTTTCTACCAGCGTGCTATCCGC
AAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS8AASPNIDRAFT_206235Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206235-T1ASPNIDRAFT_206235-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206235-T1.utr5p1ASPNIDRAFT_206235-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_206235-T1.utr5p2ASPNIDRAFT_206235-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206235-T1.exon1ASPNIDRAFT_206235-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206235-T1.exon2ASPNIDRAFT_206235-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206235-T1.exon3ASPNIDRAFT_206235-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206235-T1.cdsASPNIDRAFT_206235-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206235-T1.utr3p1ASPNIDRAFT_206235-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001047
DBxrefInterPro:IPR022309
DBxrefPFAM:PF01201
Productribosomal protein S8A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:894016..895413 +
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