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ASPNIDRAFT_206304-T1, ASPNIDRAFT_206304-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206304-T1
Unique NameASPNIDRAFT_206304-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:695238..696803-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206304-T1 ID=ASPNIDRAFT_206304-T1|Name=ASPNIDRAFT_206304-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1566bp|location=Sequence derived from alignment at ACJE01000004.1:695238..696803- (Aspergillus niger ATCC 1015)
CTCCACCCCGTTCTCTCTTTTCCCTTTCCCTCTTTTTCTTTTTCTTTTTC
TTTTTTTTTTATCTTCCCTCCTTGAATCCACCCTGGTTCTCGAAGGTGTT
CTAAGTAGTTCCCTTCGACTTTCCATATTCCCTGATCGCTTAGAACGCAT
TGGGTCCAAGACGAACTGCAGACCACGCCGAAACCCTGCCGGTTCGCCTT
CAATTCCGCCTGCCTGCAAAGTTCCACGACCCCCCCCCTCCCCCCCTGGA
TCCTACTTCCCACACGCACTTCTGCTGCTGCTGCTCCCCCCCAGTCTGCT
GCTTTAAGCTTGGCCTAATCATTAGACCCGCCGTTGCTGTGGACTGCCCT
TTAGGCGCCTTTGCTTTGCGCGAAACCCCCGACGACCTGGGCCCCGACTC
TTGTCGTCTTGTCTCTTTCTGCAAAAGAAATTTGTGTTGCTGCTCCTTCG
ACCCGCTGTCACAGCTCCTGTTGGGATAGCTTCCATTACCGCTTCTCTCT
CTCTCTTCCCCTCCTCCCCTTCCCTTCCCTCACGGCATAATTCACGCCAG
ATCCTACCAGAATGGCTTCCAAGGTAAGCCTTGTCGCTGCGCTTTCCAAT
TTCCGTCATTAGCTTCCATGTGCCTCCTGTCAACCTCCCTTCCCGACCGA
CTTTCTCTCATGATCTCCGCACACTGCCTCACCCCGGAAAATGGACGATT
CGCTCACCTCTCGGTCGCATATAGTTCTTAAGAGAATACAAACTCGTCGT
TGTCGGTGGTGGTGGTGTCGGAAAGTCTTGCTTGACTATTCAATTGATCC
AGAGCCACTTCGTGGATGAATATGACCCGACAATTGAAGGTGGGCGCTGA
GCTCTACTGTAGCTTTCCCGACCGTGTGGCTCATGTTTCGATCGTGTTTA
TACAGATTCCTACCGCAAGCAGTGCGTTATCGACGAGGAGGTGGCATTGT
TGGACGTTTTAGATACTGCCGGACAGGAGGAGTACTCGGCGATGCGTGAA
CAGTACATGCGAACCGGCGAAGGCTTCCTTCTCGTCTACTCGATAACGTC
GCGCCAATCATTCGAGGAAATCATGACTTTCCAACAACAGATCCTGCGAG
TCAAGGATAAGGACTACTTTCCCATCATCGTGGTCGGCAACAAGTGCGAT
TTAGAAAAGGAGAGGGCTGTTTCCGAAGAAGGTGGGTTTCCCGGCCCAGC
ATCTGCTTGCCGGGGGAGGATGTGGCTGACGGTTCTTTCTTTACTTTACA
GAGGGTGAGGCTCTAGCACGGCAGTTCGGCTGCAAGTTCATCGAGACATC
CGCCAAGTCCCGTATTAACGTCGAGAACGCTTTCTACGACCTCGTGCGCG
AGATCCGTCGGTTCAACAAAGAGATGTCATCGTACCCGTCTGGCGCGGGC
GGCGGCTCACGCGCCCCGGAAGGAAAAATGGACGTCAGCGAGCCTGGCGA
TGACGCCGGCTGCTGTGGAAAATGTATAATTATGTAATGGGACAGGCGTT
GGATCTAAAAGAAATACATACAGGTCGAGATACGGAAGGAAAGCAAAAAC
ACATACATTCACTCCC
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Coding sequence (CDS) from alignment at ACJE01000004.1:695238..696803-

>ASPNIDRAFT_206304-T1 ID=ASPNIDRAFT_206304-T1|Name=ASPNIDRAFT_206304-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2556bp|location=Sequence derived from alignment at ACJE01000004.1:695238..696803- (Aspergillus niger ATCC 1015)
AGGGTGAGGCTCTAGCACGGCAGTTCGGCTGCAAGTTCATCGAGACATCC
GCCAAGTCCCGTATTAACGTCGAGAACGCTTTCTACGACCTCGTGCGCGA
GATCCGTCGGTTCAACAAAGAGATGTCATCGTACCCGTCTGGCGCGGGCG
GCGGCTCACGCGCCCCGGAAGGAAAAATGGACGTCAGCGAGCCTGGCGAT
GACGCCGGCTGCTGTGGAAAATGTATAATTATGTAAATTCCTACCGCAAG
CAGTGCGTTATCGACGAGGAGGTGGCATTGTTGGACGTTTTAGATACTGC
CGGACAGGAGGAGTACTCGGCGATGCGTGAACAGTACATGCGAACCGGCG
AAGGCTTCCTTCTCGTCTACTCGATAACGTCGCGCCAATCATTCGAGGAA
ATCATGACTTTCCAACAACAGATCCTGCGAGTCAAGGATAAGGACTACTT
TCCCATCATCGTGGTCGGCAACAAGTGCGATTTAGAAAAGGAGAGGGCTG
TTTCCGAAGAAGTTCTTAAGAGAATACAAACTCGTCGTTGTCGGTGGTGG
TGGTGTCGGAAAGTCTTGCTTGACTATTCAATTGATCCAGAGCCACTTCG
TGGATGAATATGACCCGACAATTGAAGATGGCTTCCAAGAGGGTGAGGCT
CTAGCACGGCAGTTCGGCTGCAAGTTCATCGAGACATCCGCCAAGTCCCG
TATTAACGTCGAGAACGCTTTCTACGACCTCGTGCGCGAGATCCGTCGGT
TCAACAAAGAGATGTCATCGTACCCGTCTGGCGCGGGCGGCGGCTCACGC
GCCCCGGAAGGAAAAATGGACGTCAGCGAGCCTGGCGATGACGCCGGCTG
CTGTGGAAAATGTATAATTATGTAAATTCCTACCGCAAGCAGTGCGTTAT
CGACGAGGAGGTGGCATTGTTGGACGTTTTAGATACTGCCGGACAGGAGG
AGTACTCGGCGATGCGTGAACAGTACATGCGAACCGGCGAAGGCTTCCTT
CTCGTCTACTCGATAACGTCGCGCCAATCATTCGAGGAAATCATGACTTT
CCAACAACAGATCCTGCGAGTCAAGGATAAGGACTACTTTCCCATCATCG
TGGTCGGCAACAAGTGCGATTTAGAAAAGGAGAGGGCTGTTTCCGAAGAA
GTTCTTAAGAGAATACAAACTCGTCGTTGTCGGTGGTGGTGGTGTCGGAA
AGTCTTGCTTGACTATTCAATTGATCCAGAGCCACTTCGTGGATGAATAT
GACCCGACAATTGAAGATGGCTTCCAAGAGGGTGAGGCTCTAGCACGGCA
GTTCGGCTGCAAGTTCATCGAGACATCCGCCAAGTCCCGTATTAACGTCG
AGAACGCTTTCTACGACCTCGTGCGCGAGATCCGTCGGTTCAACAAAGAG
ATGTCATCGTACCCGTCTGGCGCGGGCGGCGGCTCACGCGCCCCGGAAGG
AAAAATGGACGTCAGCGAGCCTGGCGATGACGCCGGCTGCTGTGGAAAAT
GTATAATTATGTAAATTCCTACCGCAAGCAGTGCGTTATCGACGAGGAGG
TGGCATTGTTGGACGTTTTAGATACTGCCGGACAGGAGGAGTACTCGGCG
ATGCGTGAACAGTACATGCGAACCGGCGAAGGCTTCCTTCTCGTCTACTC
GATAACGTCGCGCCAATCATTCGAGGAAATCATGACTTTCCAACAACAGA
TCCTGCGAGTCAAGGATAAGGACTACTTTCCCATCATCGTGGTCGGCAAC
AAGTGCGATTTAGAAAAGGAGAGGGCTGTTTCCGAAGAAGTTCTTAAGAG
AATACAAACTCGTCGTTGTCGGTGGTGGTGGTGTCGGAAAGTCTTGCTTG
ACTATTCAATTGATCCAGAGCCACTTCGTGGATGAATATGACCCGACAAT
TGAAGATGGCTTCCAAGAGGGTGAGGCTCTAGCACGGCAGTTCGGCTGCA
AGTTCATCGAGACATCCGCCAAGTCCCGTATTAACGTCGAGAACGCTTTC
TACGACCTCGTGCGCGAGATCCGTCGGTTCAACAAAGAGATGTCATCGTA
CCCGTCTGGCGCGGGCGGCGGCTCACGCGCCCCGGAAGGAAAAATGGACG
TCAGCGAGCCTGGCGATGACGCCGGCTGCTGTGGAAAATGTATAATTATG
TAAATTCCTACCGCAAGCAGTGCGTTATCGACGAGGAGGTGGCATTGTTG
GACGTTTTAGATACTGCCGGACAGGAGGAGTACTCGGCGATGCGTGAACA
GTACATGCGAACCGGCGAAGGCTTCCTTCTCGTCTACTCGATAACGTCGC
GCCAATCATTCGAGGAAATCATGACTTTCCAACAACAGATCCTGCGAGTC
AAGGATAAGGACTACTTTCCCATCATCGTGGTCGGCAACAAGTGCGATTT
AGAAAAGGAGAGGGCTGTTTCCGAAGAAGTTCTTAAGAGAATACAAACTC
GTCGTTGTCGGTGGTGGTGGTGTCGGAAAGTCTTGCTTGACTATTCAATT
GATCCAGAGCCACTTCGTGGATGAATATGACCCGACAATTGAAGATGGCT
TCCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206304ASPNIDRAFT_206304Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206304-T1ASPNIDRAFT_206304-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206304-T1.cdsASPNIDRAFT_206304-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206304-T1.utr3p1ASPNIDRAFT_206304-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206304-T1.exon4ASPNIDRAFT_206304-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206304-T1.exon3ASPNIDRAFT_206304-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206304-T1.exon2ASPNIDRAFT_206304-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206304-T1.exon1ASPNIDRAFT_206304-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206304-T1.utr5p1ASPNIDRAFT_206304-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:695238..696803 -
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