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ASPNIDRAFT_206489-T1, ASPNIDRAFT_206489-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206489-T1
Unique NameASPNIDRAFT_206489-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:467004..467980+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206489-T1 ID=ASPNIDRAFT_206489-T1|Name=ASPNIDRAFT_206489-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=977bp|location=Sequence derived from alignment at ACJE01000010.1:467004..467980+ (Aspergillus niger ATCC 1015)
CAGACCTCCTCCCCTCCTCCCTCCGCTTCATCCCACCCCCCTCCAATCAA
CACCCCAAGTTTCCTTTTTAAGGTTACTATACCTTCAATCTATCACAATG
GGTGCCATTCCTGAAGTTGACCCCGATGAGCCCGTCGAGACCAAGCCCTT
CAAGTTCGTGACTGGTGAGCTTTCCTTTCCCACCTCCAATGGGTCCAATT
CCTCCCGTAACTAAGGTCAATTGCTAACTATTTCACAGCTGGTACGTCTA
GGATAGGTTTTCGAGTATTCGCAGCGCCGTCGCTGTCGTCGCGATCGAGG
TAGTTTTGTGTGCTGACATATGAGGTGATGAATAGGCTATGACGCTCGTT
TCCCCCAGCAGAACCAGTACGTGATTTTCGCACACCTCTCCGCTCAATCT
CCCCAGTACGAACTGCAATAACTAACCACACATTTTTTTTTCCTCCTCAC
AGGACCAAGCACTGCTGGCAGAACTACGTCGACTACCACAAGTGTGTCAC
CGCCAAGGGCGAGGACTTCCGCCCATGCCGTCAGGTTAGCTAGCTACTGC
CTCCCACCCATTTTCGTCACGAAGTGTATCCAATCCTAACCACCATGGAA
CCGAAAACAGTTCTACCACGCCTTCCGCTCTCTCTGCCCCAAGGCCTGGA
CTGACAGATGGGACGGCCAGCGCGGTATGTAGCCCCATTATATATGATCC
TATACCGTATATATCAAACAGCAGGATACTAACAAAAACTTACAGAGGCT
GGTAACTTCCCCGCTCGTCTCGACCGGTAGACGCATTAACTACTTTGTTC
ACAGTTAAATTTGAAAGTTCAAAGTTGTTTTCGTGTGTCTTCTTGTCACT
GTCAACGTGTACTCTACCCTTTAAGTTGGATCCGGCGAGAATTGTTAGCT
CTGACTCCCCAGGCACAATTCGGCTGGGTGGGAGACGAGTGTATATAGAC
TCGCGTAGTTGGAATGATGTGTCAAAC
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Coding sequence (CDS) from alignment at ACJE01000010.1:467004..467980+

>ASPNIDRAFT_206489-T1 ID=ASPNIDRAFT_206489-T1|Name=ASPNIDRAFT_206489-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1410bp|location=Sequence derived from alignment at ACJE01000010.1:467004..467980+ (Aspergillus niger ATCC 1015)
ATGGGTGCCATTCCTGAAGTTGACCCCGATGAGCCCGTCGAGACCAAGCC
CTTCAAGTTCGTGACTGTAGGCTATGACGCTCGTTTCCCCCAGCAGAACC
AGACCAAGCACTGCTGGCAGAACTACGTCGACTACCACAAGTGTGTCACC
GCCAAGGGCGAGGACTTCCGCCCATGCCGTCAGTTCTACCACGCCTTCCG
CTCTCTCTGCCCCAAGGCCTGGACTGACAGATGGGACGGCCAGCGCGAGG
CTGGTAACTTCCCCGCTCGTCTCGACCGGTAGATGGGTGCCATTCCTGAA
GTTGACCCCGATGAGCCCGTCGAGACCAAGCCCTTCAAGTTCGTGACTGT
AGGCTATGACGCTCGTTTCCCCCAGCAGAACCAGACCAAGCACTGCTGGC
AGAACTACGTCGACTACCACAAGTGTGTCACCGCCAAGGGCGAGGACTTC
CGCCCATGCCGTCAGTTCTACCACGCCTTCCGCTCTCTCTGCCCCAAGGC
CTGGACTGACAGATGGGACGGCCAGCGCGAGGCTGGTAACTTCCCCGCTC
GTCTCGACCGGTAGATGGGTGCCATTCCTGAAGTTGACCCCGATGAGCCC
GTCGAGACCAAGCCCTTCAAGTTCGTGACTGTAGGCTATGACGCTCGTTT
CCCCCAGCAGAACCAGACCAAGCACTGCTGGCAGAACTACGTCGACTACC
ACAAGTGTGTCACCGCCAAGGGCGAGGACTTCCGCCCATGCCGTCAGTTC
TACCACGCCTTCCGCTCTCTCTGCCCCAAGGCCTGGACTGACAGATGGGA
CGGCCAGCGCGAGGCTGGTAACTTCCCCGCTCGTCTCGACCGGTAGATGG
GTGCCATTCCTGAAGTTGACCCCGATGAGCCCGTCGAGACCAAGCCCTTC
AAGTTCGTGACTGTAGGCTATGACGCTCGTTTCCCCCAGCAGAACCAGAC
CAAGCACTGCTGGCAGAACTACGTCGACTACCACAAGTGTGTCACCGCCA
AGGGCGAGGACTTCCGCCCATGCCGTCAGTTCTACCACGCCTTCCGCTCT
CTCTGCCCCAAGGCCTGGACTGACAGATGGGACGGCCAGCGCGAGGCTGG
TAACTTCCCCGCTCGTCTCGACCGGTAGATGGGTGCCATTCCTGAAGTTG
ACCCCGATGAGCCCGTCGAGACCAAGCCCTTCAAGTTCGTGACTGTAGGC
TATGACGCTCGTTTCCCCCAGCAGAACCAGACCAAGCACTGCTGGCAGAA
CTACGTCGACTACCACAAGTGTGTCACCGCCAAGGGCGAGGACTTCCGCC
CATGCCGTCAGTTCTACCACGCCTTCCGCTCTCTCTGCCCCAAGGCCTGG
ACTGACAGATGGGACGGCCAGCGCGAGGCTGGTAACTTCCCCGCTCGTCT
CGACCGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX12ASPNIDRAFT_206489Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206489-T1ASPNIDRAFT_206489-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206489-T1.utr5p1ASPNIDRAFT_206489-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206489-T1.exon1ASPNIDRAFT_206489-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206489-T1.exon2ASPNIDRAFT_206489-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206489-T1.exon3ASPNIDRAFT_206489-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206489-T1.exon4ASPNIDRAFT_206489-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206489-T1.exon5ASPNIDRAFT_206489-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206489-T1.cdsASPNIDRAFT_206489-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206489-T1.utr3p1ASPNIDRAFT_206489-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265JVH
DBxrefInterPro:IPR003213
DBxrefInterPro:IPR036549
DBxrefPFAM:PF02297
ProductCytochrome c oxidase subunit 6B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:467004..467980 +
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