You are here

Home

ASPNIDRAFT_206638-T1, ASPNIDRAFT_206638-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206638-T1
Unique NameASPNIDRAFT_206638-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:842117..844742+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206638-T1 ID=ASPNIDRAFT_206638-T1|Name=ASPNIDRAFT_206638-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2626bp|location=Sequence derived from alignment at ACJE01000010.1:842117..844742+ (Aspergillus niger ATCC 1015)
ATGCCCGGCGCTGATAGGAAACCCAAGACCTTGTATGACAAGGTCCTGGA
CCACCACATTGTCAACGAGCAGGAAGATGGTACTCTTCTGATCTACATTG
ACAGACACCTTGTCCACGAAGTCACATCTCCCCAGGCTTTTGAGGGTCTC
AAGAATGCTGGTCGTAAAGTCCGCCGGCCGGACTGCACCCTGGTGACCGT
TGACCACGTATGTCTTTCATTTCTTTTTCCCCCACATCGAATTTCTGGCA
GCCATCTAACTGACTCAAATGACAGAACATTCCCACCTCCTCCCGCAAAA
ACTTCAAGAACGTCGATGAGTTCATCAAAGAGAACGACTCCCGCCTCCAA
TGCAGCACCCTCGAGGAGAACGTCAAGGACTTCGGTCTCACATACTTTGG
CATGGGCGACAAGCGCCAGGGTATTGTCCACATCATCGGTCCTGAGCAGG
GTTTCACCCTTCCCGGCACAACTGTCGTCTGCGGTGACAGTCACACCTCC
ACACACGGTGCCTTCGGTGCCCTTGCCTTCGGTATCGGTACCAGTGAGGT
CGAGCACGTTCTCGCCACCCAGACCCTCATCACCCGTCGCAGCAAGAACA
TGCGCATCCAGGTCGACGGTGAGCTGCCCGCCGGTGTCACCAGTAAGGAT
GTCGTCCTCCACATCATCGGTGTCATTGGTACCGCCGGAGGTACCGGTGC
CGTTATTGAGTTCTGCGGTTCCGTCATTCGCAGCCTGAGCATGGAGGCCC
GTATGTCCATGTGCAACATGTCCATCGAAGCTGGTGCCCGTGCCGGTATG
ATCGCTCCCGATCAGATCACCTTCGATTACCTGAAGGGTCGCCCTCTTGC
TCCCAAGGTCGACAGCCCCGAATGGACCAGGGCCGTCAACTTCTGGTCCA
GCCTGGCCTCCGACGAAGATGCCGTCTACGACAAGACCGTCATCATCGAT
GGCAAGGACATCATCCCCACCGTCTCCTGGGGTACCTCCCCCCAGGACGT
CATCCCCATCAACGGCGTCGTTCCCGGCCCCGATGACTTCCAGGACGAGA
GCCGCAAGCTTGCCTGCAAGCGCGCTCTCGAATACATGGGCCTGACGGCC
GGCACCCCCATGAAGGACATTACGGTCGACAAGGTTTTCATTGGCTCTTG
CACCAACGCCCGTATCGAGGATCTCCGCGCCGCCGCCAAGGTTGTTCGCG
GCAAGAAGATCGCCTCCAACATCAAGCGTGCCATGGTCGTCCCCGGCTCT
GGTCTGGTTAAGCAACAAGCCGAGTCTGAAGGCCTCGACAAGATCTTTTC
TGACGCGGGCTTCGAATGGCGTGAGGCCGGCTGCTCCATGTGCCTGGGCA
TGAACCCCGACATTCTCTCTCCCCAGGAACGCTGCGCCAGTACCTCCAAC
CGTAACTTCGAGGGTCGCCAAGGTGCCGGCGGTCGCACTCACCTCATGTC
CCCCGCCATGGCCGCCTCCGCCGCCATCGTTGGCAAGCTGGCCGACGTGC
GCGAGCACATCACCACCAGCCCCGTCCTCGGCAAGGTGCAGCCCAAGATC
GACGTGCAAGAGGAACTGCACGAAGAGCCCACCACTGAAGATGAAGTCGA
ACGCATCATGGACCTCCCCGCCGACAACGAACCCCACACCAACTCCTCCG
CCAGCGCCACCTCCTCCGCTGGCCTGCCCAAATTCACCACCCTGAAGGGT
ATCGCCGCTCCGATGGACCGCTCCAACGTCGACACCGACGCCATCATTCC
CAAGCAGTTCCTCAAGACCATCAAGCGCACCGGTCTTGGCAGCGCCCTGT
TCTACGAGCTCCGCTACAAGGACGGCGCCGAGGACCCCTCTTTCATCCTG
AACCAAGGCATCTACCGCAACTCGAAGATCCTCGTCGTCACCGGCCCCAA
CTTCGGCTGCGGTAGTTCCCGTGAACACGCCCCCTGGGCCCTCCTCGACT
TCGGCATCAAGTGCATCATCGCCCCCTCCTTCGCCGATATCTTCTTCAAC
AACACCTTCAAGAACGGCATGTTGCCCGTCGTCATCAGCGACGAGGCCGT
CCTGGCCAAGATCGCCGCTGAGGCCCACGCCGGCCGCGAAGTCGAGGTCG
ATCTCGTCAACCAGCAGATCAAGGACGCCGCTGGTAACAAGCTCGCCGAC
TTTGATGTCGATGGATTCCGCAAGCACTGCCTGGTCAACGGTCTCGATGA
CATTGGCCTTACTCTGCAGATGGAGTCCAAGATCAAGAGCTTCGAGAACA
AGAGGACCATTGAGACCCCTTGGTTGGATGGCAGTGGCTACTTGAAGAGA
GGTAACCGCGGCGCTACTATGGTGCAGGCGGCGCCGGTGCCCAAGACGAA
CAGGGGCGACGTTAAGTCGGAGCCTTTGGAGTGGTAGATTGCATGCATAC
ATACATTTGGGGGTTAGAGTGAAGACTTGATTATAATTTTCCTGTTGATA
TGACTTGATGATGAAGCTGGATTTCGGGGTTTCTTTTTATCATTACTATT
TCCTTTTACTCGATTTCGGCTATATATCACTTTTGTTTGGGGAAAATGAC
TTGCATCTCGGCATAGGAAGGACGATACCATATGAATAGGGTTAATAGAA
ACAAGAAAAAACTTGTCTTCGTACAA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:842117..844742+

>ASPNIDRAFT_206638-T1 ID=ASPNIDRAFT_206638-T1|Name=ASPNIDRAFT_206638-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4638bp|location=Sequence derived from alignment at ACJE01000010.1:842117..844742+ (Aspergillus niger ATCC 1015)
ATGCCCGGCGCTGATAGGAAACCCAAGACCTTGTATGACAAGGTCCTGGA
CCACCACATTGTCAACGAGCAGGAAGATGGTACTCTTCTGATCTACATTG
ACAGACACCTTGTCCACGAAGTCACATCTCCCCAGGCTTTTGAGGGTCTC
AAGAATGCTGGTCGTAAAGTCCGCCGGCCGGACTGCACCCTGGTGACCGT
TGACCACAACATTCCCACCTCCTCCCGCAAAAACTTCAAGAACGTCGATG
AGTTCATCAAAGAGAACGACTCCCGCCTCCAATGCAGCACCCTCGAGGAG
AACGTCAAGGACTTCGGTCTCACATACTTTGGCATGGGCGACAAGCGCCA
GGGTATTGTCCACATCATCGGTCCTGAGCAGGGTTTCACCCTTCCCGGCA
CAACTGTCGTCTGCGGTGACAGTCACACCTCCACACACGGTGCCTTCGGT
GCCCTTGCCTTCGGTATCGGTACCAGTGAGGTCGAGCACGTTCTCGCCAC
CCAGACCCTCATCACCCGTCGCAGCAAGAACATGCGCATCCAGGTCGACG
GTGAGCTGCCCGCCGGTGTCACCAGTAAGGATGTCGTCCTCCACATCATC
GGTGTCATTGGTACCGCCGGAGGTACCGGTGCCGTTATTGAGTTCTGCGG
TTCCGTCATTCGCAGCCTGAGCATGGAGGCCCGTATGTCCATGTGCAACA
TGTCCATCGAAGCTGGTGCCCGTGCCGGTATGATCGCTCCCGATCAGATC
ACCTTCGATTACCTGAAGGGTCGCCCTCTTGCTCCCAAGGTCGACAGCCC
CGAATGGACCAGGGCCGTCAACTTCTGGTCCAGCCTGGCCTCCGACGAAG
ATGCCGTCTACGACAAGACCGTCATCATCGATGGCAAGGACATCATCCCC
ACCGTCTCCTGGGGTACCTCCCCCCAGGACGTCATCCCCATCAACGGCGT
CGTTCCCGGCCCCGATGACTTCCAGGACGAGAGCCGCAAGCTTGCCTGCA
AGCGCGCTCTCGAATACATGGGCCTGACGGCCGGCACCCCCATGAAGGAC
ATTACGGTCGACAAGGTTTTCATTGGCTCTTGCACCAACGCCCGTATCGA
GGATCTCCGCGCCGCCGCCAAGGTTGTTCGCGGCAAGAAGATCGCCTCCA
ACATCAAGCGTGCCATGGTCGTCCCCGGCTCTGGTCTGGTTAAGCAACAA
GCCGAGTCTGAAGGCCTCGACAAGATCTTTTCTGACGCGGGCTTCGAATG
GCGTGAGGCCGGCTGCTCCATGTGCCTGGGCATGAACCCCGACATTCTCT
CTCCCCAGGAACGCTGCGCCAGTACCTCCAACCGTAACTTCGAGGGTCGC
CAAGGTGCCGGCGGTCGCACTCACCTCATGTCCCCCGCCATGGCCGCCTC
CGCCGCCATCGTTGGCAAGCTGGCCGACGTGCGCGAGCACATCACCACCA
GCCCCGTCCTCGGCAAGGTGCAGCCCAAGATCGACGTGCAAGAGGAACTG
CACGAAGAGCCCACCACTGAAGATGAAGTCGAACGCATCATGGACCTCCC
CGCCGACAACGAACCCCACACCAACTCCTCCGCCAGCGCCACCTCCTCCG
CTGGCCTGCCCAAATTCACCACCCTGAAGGGTATCGCCGCTCCGATGGAC
CGCTCCAACGTCGACACCGACGCCATCATTCCCAAGCAGTTCCTCAAGAC
CATCAAGCGCACCGGTCTTGGCAGCGCCCTGTTCTACGAGCTCCGCTACA
AGGACGGCGCCGAGGACCCCTCTTTCATCCTGAACCAAGGCATCTACCGC
AACTCGAAGATCCTCGTCGTCACCGGCCCCAACTTCGGCTGCGGTAGTTC
CCGTGAACACGCCCCCTGGGCCCTCCTCGACTTCGGCATCAAGTGCATCA
TCGCCCCCTCCTTCGCCGATATCTTCTTCAACAACACCTTCAAGAACGGC
ATGTTGCCCGTCGTCATCAGCGACGAGGCCGTCCTGGCCAAGATCGCCGC
TGAGGCCCACGCCGGCCGCGAAGTCGAGGTCGATCTCGTCAACCAGCAGA
TCAAGGACGCCGCTGGTAACAAGCTCGCCGACTTTGATGTCGATGGATTC
CGCAAGCACTGCCTGGTCAACGGTCTCGATGACATTGGCCTTACTCTGCA
GATGGAGTCCAAGATCAAGAGCTTCGAGAACAAGAGGACCATTGAGACCC
CTTGGTTGGATGGCAGTGGCTACTTGAAGAGAGGTAACCGCGGCGCTACT
ATGGTGCAGGCGGCGCCGGTGCCCAAGACGAACAGGGGCGACGTTAAGTC
GGAGCCTTTGGAGTGGTAGATGCCCGGCGCTGATAGGAAACCCAAGACCT
TGTATGACAAGGTCCTGGACCACCACATTGTCAACGAGCAGGAAGATGGT
ACTCTTCTGATCTACATTGACAGACACCTTGTCCACGAAGTCACATCTCC
CCAGGCTTTTGAGGGTCTCAAGAATGCTGGTCGTAAAGTCCGCCGGCCGG
ACTGCACCCTGGTGACCGTTGACCACAACATTCCCACCTCCTCCCGCAAA
AACTTCAAGAACGTCGATGAGTTCATCAAAGAGAACGACTCCCGCCTCCA
ATGCAGCACCCTCGAGGAGAACGTCAAGGACTTCGGTCTCACATACTTTG
GCATGGGCGACAAGCGCCAGGGTATTGTCCACATCATCGGTCCTGAGCAG
GGTTTCACCCTTCCCGGCACAACTGTCGTCTGCGGTGACAGTCACACCTC
CACACACGGTGCCTTCGGTGCCCTTGCCTTCGGTATCGGTACCAGTGAGG
TCGAGCACGTTCTCGCCACCCAGACCCTCATCACCCGTCGCAGCAAGAAC
ATGCGCATCCAGGTCGACGGTGAGCTGCCCGCCGGTGTCACCAGTAAGGA
TGTCGTCCTCCACATCATCGGTGTCATTGGTACCGCCGGAGGTACCGGTG
CCGTTATTGAGTTCTGCGGTTCCGTCATTCGCAGCCTGAGCATGGAGGCC
CGTATGTCCATGTGCAACATGTCCATCGAAGCTGGTGCCCGTGCCGGTAT
GATCGCTCCCGATCAGATCACCTTCGATTACCTGAAGGGTCGCCCTCTTG
CTCCCAAGGTCGACAGCCCCGAATGGACCAGGGCCGTCAACTTCTGGTCC
AGCCTGGCCTCCGACGAAGATGCCGTCTACGACAAGACCGTCATCATCGA
TGGCAAGGACATCATCCCCACCGTCTCCTGGGGTACCTCCCCCCAGGACG
TCATCCCCATCAACGGCGTCGTTCCCGGCCCCGATGACTTCCAGGACGAG
AGCCGCAAGCTTGCCTGCAAGCGCGCTCTCGAATACATGGGCCTGACGGC
CGGCACCCCCATGAAGGACATTACGGTCGACAAGGTTTTCATTGGCTCTT
GCACCAACGCCCGTATCGAGGATCTCCGCGCCGCCGCCAAGGTTGTTCGC
GGCAAGAAGATCGCCTCCAACATCAAGCGTGCCATGGTCGTCCCCGGCTC
TGGTCTGGTTAAGCAACAAGCCGAGTCTGAAGGCCTCGACAAGATCTTTT
CTGACGCGGGCTTCGAATGGCGTGAGGCCGGCTGCTCCATGTGCCTGGGC
ATGAACCCCGACATTCTCTCTCCCCAGGAACGCTGCGCCAGTACCTCCAA
CCGTAACTTCGAGGGTCGCCAAGGTGCCGGCGGTCGCACTCACCTCATGT
CCCCCGCCATGGCCGCCTCCGCCGCCATCGTTGGCAAGCTGGCCGACGTG
CGCGAGCACATCACCACCAGCCCCGTCCTCGGCAAGGTGCAGCCCAAGAT
CGACGTGCAAGAGGAACTGCACGAAGAGCCCACCACTGAAGATGAAGTCG
AACGCATCATGGACCTCCCCGCCGACAACGAACCCCACACCAACTCCTCC
GCCAGCGCCACCTCCTCCGCTGGCCTGCCCAAATTCACCACCCTGAAGGG
TATCGCCGCTCCGATGGACCGCTCCAACGTCGACACCGACGCCATCATTC
CCAAGCAGTTCCTCAAGACCATCAAGCGCACCGGTCTTGGCAGCGCCCTG
TTCTACGAGCTCCGCTACAAGGACGGCGCCGAGGACCCCTCTTTCATCCT
GAACCAAGGCATCTACCGCAACTCGAAGATCCTCGTCGTCACCGGCCCCA
ACTTCGGCTGCGGTAGTTCCCGTGAACACGCCCCCTGGGCCCTCCTCGAC
TTCGGCATCAAGTGCATCATCGCCCCCTCCTTCGCCGATATCTTCTTCAA
CAACACCTTCAAGAACGGCATGTTGCCCGTCGTCATCAGCGACGAGGCCG
TCCTGGCCAAGATCGCCGCTGAGGCCCACGCCGGCCGCGAAGTCGAGGTC
GATCTCGTCAACCAGCAGATCAAGGACGCCGCTGGTAACAAGCTCGCCGA
CTTTGATGTCGATGGATTCCGCAAGCACTGCCTGGTCAACGGTCTCGATG
ACATTGGCCTTACTCTGCAGATGGAGTCCAAGATCAAGAGCTTCGAGAAC
AAGAGGACCATTGAGACCCCTTGGTTGGATGGCAGTGGCTACTTGAAGAG
AGGTAACCGCGGCGCTACTATGGTGCAGGCGGCGCCGGTGCCCAAGACGA
ACAGGGGCGACGTTAAGTCGGAGCCTTTGGAGTGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:00093163-isopropylmalate dehydratase complex
Vocabulary: Biological Process
TermDefinition
GO:0009098leucine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:00038613-isopropylmalate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206638ASPNIDRAFT_206638Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206638-T1.exon1ASPNIDRAFT_206638-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206638-T1.exon2ASPNIDRAFT_206638-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206638-T1.cdsASPNIDRAFT_206638-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206638-T1.utr3p1ASPNIDRAFT_206638-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206638-T1ASPNIDRAFT_206638-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260SL3
DBxrefInterPro:IPR036008
DBxrefInterPro:IPR033941
DBxrefInterPro:IPR033940
DBxrefInterPro:IPR018136
DBxrefInterPro:IPR000573
DBxrefInterPro:IPR004430
DBxrefInterPro:IPR015931
DBxrefInterPro:IPR015928
DBxrefInterPro:IPR004431
DBxrefInterPro:IPR012235
DBxrefInterPro:IPR001030
DBxrefPFAM:PF00694
DBxrefPFAM:PF00330
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:842117..844742 +
Powered by Drupal