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ASPNIDRAFT_206681-T1, ASPNIDRAFT_206681-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206681-T1
Unique NameASPNIDRAFT_206681-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:994572..998027+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206681-T1 ID=ASPNIDRAFT_206681-T1|Name=ASPNIDRAFT_206681-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=3456bp|location=Sequence derived from alignment at ACJE01000010.1:994572..998027+ (Aspergillus niger ATCC 1015)
CCCGGGCCTTACAGCTTTACCTTACCGACACCCAACAATACGGGGCACGC
ACTTCTCCAGACCACACAGCCACTTCTGCAGTTCCAGTTTCTACTCCGTA
ATCCCTCTCGACTCTAGTCCGCCCCACATTCTTTTTTTTTTCTTAACACG
CCTTACCTTTTTTGACACCCTCTCTTCCCGGTCAGTAATAGTGGAATTTT
TTTAACACACCGTGCGTGGCCCGAAAACCAGACGGAAGAAGCCCCGAGAT
AGGCAACTGATGGAGACACCCGTTTGCCATTTGGCAATTCAAGGACTTTG
AAGAGATCATATTCATCAGAGAACACAAGATCTGAGAGAGTGTGTAAGAG
CGGTAGATACCCAAGATTGTAAAATCATCTATCAAGTCAAGAAAATTATG
AAAAGAATAAGAAGAGCATGAAATAACTACAAAGCACTGGGTTCCATCTG
ACTGGGAAAGCTGACTGACCGGTTTGAAGCCCCAAGAAGCAAAGCAGCCG
ATCTGGTTCAAGCACGTTCTTTTTCCCTTTCCTGCTTTTTTTGCCCCCCC
GATATTTATCCCCACACAAAGTACATAGTCTTTTCTTTTTTCGATTTTTT
TTTTTAAATCCCTTTTTTTTTATTCTTATTTCCCTTTTCGTAATTTTTTT
TATCCATCTTTTTTTCGATTTTTTCAATTTTCTTTTTCCTTTTTTTTTTC
TTTTTTTTTTTTTTTTTCTTCGCGTTCCCATTCTGCTCTCCGATTCCGAT
AACCCACCCCCTCTACGACTCGCCCTCTTTTCCCTCCCCTCCCCCGAATT
CCGTTTCCTTCTTCTTCCCCTCCATTCCTCATCTTTTCGCCCTTTCCGAT
TTCTTCTCTTCTTATATCTTCGTCTCCCCAGATCATCTTCTCCAGGTTTT
CTTCCTCCCTCCCTCTTTTCGAGACCATTTGCTCAACATCACCCTTGCCC
GACTCGCTACTTATTACCCCGGGGTCCATTTCCGATTCCGGCTCACCCAA
CACTTATCATAACTACCACATTCCGTATCCCTTCAATAATTGAAAGGGAA
TTCGTCGTTATCAGCCCTTGGTTGAATTCACAATTGAATACCGCCTCGCC
TTGGTTCGTCATCAGGGCCCTGTGATCCTCACTACCCTTGCGGTCTTCCT
CCTATCATCTCTCCTTGCCAAGGTTAGGTCTGGGGTGCTAGCGGGAGGTG
ATCGACTGGCCGATATAGCTACCCCTGGTCGCGACGTGCATCACTATCGC
CTCGGCTTCTCATCCCTTCCGAACGTGTCCTTTTTAAACCCGGCTCTGTC
CTACCTTTTTACCCTCGTCGGTCTTGGGACAAGCTTCACATGCCGCCACC
GGCCTCTTCAGTAGATTTCTCAAATCTGCTGAACCCTCAAAACAATTCCA
CTGATTCCACCCCTTCCACTCCTGTGGACAGCTCCAAGACCCCTTCTACT
CCGTCCAGTACACAGTCGAACTCCAACATGGCGTCGTCAGTGAGCCTACT
TCCGCCGCTTATGAAGGGTGCCCGGCCTGCGACCGAAGAAGTTCGTCAGG
ATCTTCCCCGCCCCTACAAGTGCCCCCTCTGCGATCGCGCATTCCACCGT
CTGGAGCACCAGACAAGACACATCCGCACGCACACGGGTGAAAAGCCGCA
CGCCTGTCAATTCCCCGGCTGCACTAAGCGCTTCAGTCGTTCTGACGAGC
TTACGCGCCACTCGCGAATCCACAACAACCCTAACTCGAGGCGCAGCAAC
AAGGCTCAGCATCTGGCTGCGGCCGCTGCAGCTGCTGCAGGGCAGGACAA
CGCCATGGCCAACACCGCCAGCGCTATGATGCCTCCTCCCAGCAAGCCAA
TGACCCGGTCGGCCCCTGTGTCGCAGGTCGGCTCCCCCGACATCTCTCCC
CCTCACTCCTTCTCCAACTACGCCAGTCACATGCGATCGAACTTGGGCCC
GTATGCTCGCAATAGCGAGCGGGCATCGTCGGGCATGGACATTAACCTCC
TGGCGACTGCTGCGTCGCAGGTGGAACGCGACGAACACTTCAGCTTCCAT
GCAGGGCCACGCAATCACCATTTGTTCAGCTCGCGCCACCATGGAAGTGG
CCGTCTGCCCTCCTTGTCTGCTTACGCGATCACACACAACATGAGCCGGT
CGCATTCACATGAAGACGACGACGGTTATTCGCACCGTGTGAAACGTTCA
AGACCCAACTCTCCCAACTCGACTGCTCCTTCCTCTCCCACCTTCTCCCA
CGACTCCCTCTCACCCACTCCCGATCACACTCCCTTGGCGACTCCCGCTC
ACTCACCGCGGTTGAGACCCCTGGGCTCCAGCGATCTGCATTTGCCGTCT
ATCCGTCATTTGTCGCTCCACCACACACCAGCTCTTGCTCCGATGGAACC
CCAACCGGAAGGGCCCAACTACTACAGTCCTTCCCAGGGTCACCATGGTC
CCAGCATCTCGGACATCATGTCTAAACCGGACGGAACACAGCGCAAGCTG
CCAGTCCCTCAGGTGCCAAAAGTCGCCGTTCAGGATATGTTAAATCCCGG
TAGTGGATTTTCGTCGGTCACTTCGTCCACCGCGAATTCCGTTGCCGGTG
GCGACTTGGCAGAACGCTTCTAGTTCGAACATTCTTCAGCCACACGTTGG
TTTGTGTAAAAATTGGGTTCAAAAAATCAGCAGTTCTTTTATGCGCGCTA
CGACCGAATAGACTTGTGCATTTACAATGGTTCATGGGCATCATTGGTGT
CGGGTGATTGGGTGGTTTTTCTTCCTCAGCTCTTCTGTTGGATTTATCTT
TCACATTTATTTTCCCTTTTACTCTTTTTTTATTGCAAGGCGTCTCTACT
GATAGATGGACGGGATATCCTGTGAATTTGTTATTTTTGTCCCCTCTTCT
GATCCTCCTTGCTCTTCTCTCCAAATACTTTTTTTTTTTACTCTCCCCAC
AGACTTCCTCTGGAACATCTCCTTCTCTTCCCTAAACCTATACCAAGCGA
AATTGCTCATCAGCTCTCTTGTTTCTTATTTCTCTCTCTTCTCTTCTGAG
GCATCAGACCTTTATATCAAATTCATGTGTTGAAACACCACACTGGTTCC
ATATATACTCTTTTCTTTCCTCCACACTTAAGAAGACATTCCATTCAAAC
ATGTGATCATAGACCTCGAGCAGGATGAGAGGAATCACCATCTATAAATC
AAATAAAGCCTTAAATTGGAACATAACTACTACCATCTTGGACGAACTAC
TATGTAATAAATTCCATTCAGAAACCAATCAGATTCAAATCACATGGTAC
TCCTACTATGGAACGAGTCCACCCCCCGATGCACTACTGTAGATAAATAA
ATTAAAAATGACGGAGACCAGACCATTCCCCCCCCGGGGTCGGAGTCGGC
ACGCAGTCGGGGTACTTTACTTACGTACTGAGTAATGTGAATCAAAAACT
GGATCC
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Coding sequence (CDS) from alignment at ACJE01000010.1:994572..998027+

>ASPNIDRAFT_206681-T1 ID=ASPNIDRAFT_206681-T1|Name=ASPNIDRAFT_206681-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1284bp|location=Sequence derived from alignment at ACJE01000010.1:994572..998027+ (Aspergillus niger ATCC 1015)
ATGCCGCCACCGGCCTCTTCAGTAGATTTCTCAAATCTGCTGAACCCTCA
AAACAATTCCACTGATTCCACCCCTTCCACTCCTGTGGACAGCTCCAAGA
CCCCTTCTACTCCGTCCAGTACACAGTCGAACTCCAACATGGCGTCGTCA
GTGAGCCTACTTCCGCCGCTTATGAAGGGTGCCCGGCCTGCGACCGAAGA
AGTTCGTCAGGATCTTCCCCGCCCCTACAAGTGCCCCCTCTGCGATCGCG
CATTCCACCGTCTGGAGCACCAGACAAGACACATCCGCACGCACACGGGT
GAAAAGCCGCACGCCTGTCAATTCCCCGGCTGCACTAAGCGCTTCAGTCG
TTCTGACGAGCTTACGCGCCACTCGCGAATCCACAACAACCCTAACTCGA
GGCGCAGCAACAAGGCTCAGCATCTGGCTGCGGCCGCTGCAGCTGCTGCA
GGGCAGGACAACGCCATGGCCAACACCGCCAGCGCTATGATGCCTCCTCC
CAGCAAGCCAATGACCCGGTCGGCCCCTGTGTCGCAGGTCGGCTCCCCCG
ACATCTCTCCCCCTCACTCCTTCTCCAACTACGCCAGTCACATGCGATCG
AACTTGGGCCCGTATGCTCGCAATAGCGAGCGGGCATCGTCGGGCATGGA
CATTAACCTCCTGGCGACTGCTGCGTCGCAGGTGGAACGCGACGAACACT
TCAGCTTCCATGCAGGGCCACGCAATCACCATTTGTTCAGCTCGCGCCAC
CATGGAAGTGGCCGTCTGCCCTCCTTGTCTGCTTACGCGATCACACACAA
CATGAGCCGGTCGCATTCACATGAAGACGACGACGGTTATTCGCACCGTG
TGAAACGTTCAAGACCCAACTCTCCCAACTCGACTGCTCCTTCCTCTCCC
ACCTTCTCCCACGACTCCCTCTCACCCACTCCCGATCACACTCCCTTGGC
GACTCCCGCTCACTCACCGCGGTTGAGACCCCTGGGCTCCAGCGATCTGC
ATTTGCCGTCTATCCGTCATTTGTCGCTCCACCACACACCAGCTCTTGCT
CCGATGGAACCCCAACCGGAAGGGCCCAACTACTACAGTCCTTCCCAGGG
TCACCATGGTCCCAGCATCTCGGACATCATGTCTAAACCGGACGGAACAC
AGCGCAAGCTGCCAGTCCCTCAGGTGCCAAAAGTCGCCGTTCAGGATATG
TTAAATCCCGGTAGTGGATTTTCGTCGGTCACTTCGTCCACCGCGAATTC
CGTTGCCGGTGGCGACTTGGCAGAACGCTTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206681ASPNIDRAFT_206681Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206681-T1.utr5p1ASPNIDRAFT_206681-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206681-T1.exon1ASPNIDRAFT_206681-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206681-T1.cdsASPNIDRAFT_206681-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206681-T1.utr3p1ASPNIDRAFT_206681-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206681-T1ASPNIDRAFT_206681-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
Product creA
ProductDNA-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:994572..998027 +
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