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ASPNIDRAFT_206799-T1, ASPNIDRAFT_206799-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206799-T1
Unique NameASPNIDRAFT_206799-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1388871..1389894-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206799-T1 ID=ASPNIDRAFT_206799-T1|Name=ASPNIDRAFT_206799-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1024bp|location=Sequence derived from alignment at ACJE01000010.1:1388871..1389894- (Aspergillus niger ATCC 1015)
CTCGGGCATTCACCTTTACTAGATCTCTTTGCACTGTTACTCTCAATCCT
TCACTGAGCTCGCCCCGTTCAAGAACTCATCCGTCGTCTTGTCGATCGCC
CCGCCCTAAGTTGTAGACGTCATACATCTGTGCGCCTCTACGATCTGACA
ATTCCTCTCCCGACGAGGCTGGCCGACTATCACCCACCAGATCTTCCCTG
AACAGTCTCCGATCAACGAAGCTGTCACTTTCGCCTCGAAGAGGCGCTCT
GCCCACCATGTTCGCCGGCAAGCGCCTGAGCAAGGTAAGCCATCATGCCA
CTCACCACCCCGCTCACCATCTCGACCAATGCAACTAACCCAGATTTACA
TACAGGAGCTCTTAAAGGTACCCATTCCTCCCTGTTACCTGCAACATTCA
CCCTACCAGATCGATCACAACCACGATCTACACTTCAATGCGCCACACCT
ACACAGACCCCTAACACACAACTAACACAATCCCCCTCCACAGATGAAAG
ACCACCTTCCGCCCGGGATCACAATCGTCAAGTCCGAAAACCTCGAGGAA
TGGCAAATGGACATTAAAGTCCTCGATTCCAATCCGCTTTACCAGAACGA
GACCTACCGGCTCAAATTCACCTTTAGCAACAAATACCCTATCGGTAATT
TACCCCTCACAACCACCAGCCACATTCATTTTAACTTGTTGTACAAAGAA
GAAAATGAACTAACAAGATTCATCTTATTCGTTTCAATAGAACCCCCCGA
AGTCCAATTCATCGAATGCCCACCCACCTCCGACCACCCCCGTCCGATCC
CCATCCACCCACACATCTACAGCAACGGCATAATATGTCTCGATCTCCTC
AGCTCGGCAGGCTGGTCGCCCGTGCAGACGGTCGAGAGCGTCTGCATGAG
TATTCAGAGCATGTTGACGGCCAATTCGCGCAATGAGCGGCCTCCCGGTG
ATAGTGAATTTGTGTCGTATAATCGGAGGAGACCGAGGGATATTAATTTC
CATTACGACGATGATAATGTATAG
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Coding sequence (CDS) from alignment at ACJE01000010.1:1388871..1389894-

>ASPNIDRAFT_206799-T1 ID=ASPNIDRAFT_206799-T1|Name=ASPNIDRAFT_206799-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1896bp|location=Sequence derived from alignment at ACJE01000010.1:1388871..1389894- (Aspergillus niger ATCC 1015)
AACCCCCCGAAGTCCAATTCATCGAATGCCCACCCACCTCCGACCACCCC
CGTCCGATCCCCATCCACCCACACATCTACAGCAACGGCATAATATGTCT
CGATCTCCTCAGCTCGGCAGGCTGGTCGCCCGTGCAGACGGTCGAGAGCG
TCTGCATGAGTATTCAGAGCATGTTGACGGCCAATTCGCGCAATGAGCGG
CCTCCCGGTGATAGTGAATTTGTGTCGTATAATCGGAGGAGACCGAGGGA
TATTAATTTCCATTACGACGATGATAATGTATAGATGAAAGACCACCTTC
CGCCCGGGATCACAATCGTCAAGTCCGAAAACCTCGAGGAATGGCAAATG
GACATTAAAGTCCTCGATTCCAATCCGCTTTACCAGAACGAGACCTACCG
GCTCAAATTCACCTTTAGCAACAAATACCCTATCGGAGCTCTTAAAGATG
TTCGCCGGCAAGCGCCTGAGCAAGAACCCCCCGAAGTCCAATTCATCGAA
TGCCCACCCACCTCCGACCACCCCCGTCCGATCCCCATCCACCCACACAT
CTACAGCAACGGCATAATATGTCTCGATCTCCTCAGCTCGGCAGGCTGGT
CGCCCGTGCAGACGGTCGAGAGCGTCTGCATGAGTATTCAGAGCATGTTG
ACGGCCAATTCGCGCAATGAGCGGCCTCCCGGTGATAGTGAATTTGTGTC
GTATAATCGGAGGAGACCGAGGGATATTAATTTCCATTACGACGATGATA
ATGTATAGATGAAAGACCACCTTCCGCCCGGGATCACAATCGTCAAGTCC
GAAAACCTCGAGGAATGGCAAATGGACATTAAAGTCCTCGATTCCAATCC
GCTTTACCAGAACGAGACCTACCGGCTCAAATTCACCTTTAGCAACAAAT
ACCCTATCGGAGCTCTTAAAGATGTTCGCCGGCAAGCGCCTGAGCAAGAA
CCCCCCGAAGTCCAATTCATCGAATGCCCACCCACCTCCGACCACCCCCG
TCCGATCCCCATCCACCCACACATCTACAGCAACGGCATAATATGTCTCG
ATCTCCTCAGCTCGGCAGGCTGGTCGCCCGTGCAGACGGTCGAGAGCGTC
TGCATGAGTATTCAGAGCATGTTGACGGCCAATTCGCGCAATGAGCGGCC
TCCCGGTGATAGTGAATTTGTGTCGTATAATCGGAGGAGACCGAGGGATA
TTAATTTCCATTACGACGATGATAATGTATAGATGAAAGACCACCTTCCG
CCCGGGATCACAATCGTCAAGTCCGAAAACCTCGAGGAATGGCAAATGGA
CATTAAAGTCCTCGATTCCAATCCGCTTTACCAGAACGAGACCTACCGGC
TCAAATTCACCTTTAGCAACAAATACCCTATCGGAGCTCTTAAAGATGTT
CGCCGGCAAGCGCCTGAGCAAGAACCCCCCGAAGTCCAATTCATCGAATG
CCCACCCACCTCCGACCACCCCCGTCCGATCCCCATCCACCCACACATCT
ACAGCAACGGCATAATATGTCTCGATCTCCTCAGCTCGGCAGGCTGGTCG
CCCGTGCAGACGGTCGAGAGCGTCTGCATGAGTATTCAGAGCATGTTGAC
GGCCAATTCGCGCAATGAGCGGCCTCCCGGTGATAGTGAATTTGTGTCGT
ATAATCGGAGGAGACCGAGGGATATTAATTTCCATTACGACGATGATAAT
GTATAGATGAAAGACCACCTTCCGCCCGGGATCACAATCGTCAAGTCCGA
AAACCTCGAGGAATGGCAAATGGACATTAAAGTCCTCGATTCCAATCCGC
TTTACCAGAACGAGACCTACCGGCTCAAATTCACCTTTAGCAACAAATAC
CCTATCGGAGCTCTTAAAGATGTTCGCCGGCAAGCGCCTGAGCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206799ASPNIDRAFT_206799Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206799-T1ASPNIDRAFT_206799-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206799-T1.cdsASPNIDRAFT_206799-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206799-T1.exon4ASPNIDRAFT_206799-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206799-T1.exon3ASPNIDRAFT_206799-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206799-T1.exon2ASPNIDRAFT_206799-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206799-T1.exon1ASPNIDRAFT_206799-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206799-T1.utr5p1ASPNIDRAFT_206799-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
DBxrefPFAM:PF14461
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1388871..1389894 -
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