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ASPNIDRAFT_207204-T1, ASPNIDRAFT_207204-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_207204-T1
Unique NameASPNIDRAFT_207204-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2548522..2549770+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_207204-T1 ID=ASPNIDRAFT_207204-T1|Name=ASPNIDRAFT_207204-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1249bp|location=Sequence derived from alignment at ACJE01000010.1:2548522..2549770+ (Aspergillus niger ATCC 1015)
CTGATCTCCCCTCACCCACGTCCATTCGTCCACCTCCACAACCCACCCTC
CTCTCGCCATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGCGCCGTC
CGCCCTTCCGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCGGGTGCA
GGCCCCCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCTCCGCTA
AGCGCTTCGGCGGTCACCACGAGGACGAGACATACGAGGAGTTCTCTGCC
AGGTATGCAACTATCTCCCATGAAGCCATTGGGTTCCGACGCTCCCTGCG
GTGCACGATTCCCAATCACAGGGATTCCCACTACCAGTTCCCCGAGACAA
TTCACACATCTTTCTTGATAATACCACACCAACCCGCGAGTTCCGCCCAT
ATAACTAACCACATCTGCCGGTAGATTCGAGAAGGAATTCGACGGTGTTC
AGGATGTCTTCGAGCTCCAGGTAAGCTAATCTGCCCATATTGCATGATTC
CAATTCGTCCCTATCAATTCCCTTCCCCATAATCAGCAAAGCTGCCATTG
GCAGATAAAACCGGACCGTCCGCAGCCCCTTGGCGCCATATCAGACACCT
TTGCTGACAAGTTACTGTTCTCCCATCCAGCGTAATCTCAACAACTGCTT
CGCCTACGATCTCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGG
CTGCTCGTCGCGTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGGT
GCGCTTCCTCCTCCCCATTCCATCACCGTTTCCTTCCCATGACAATTGAA
CTTACAATGTTTTTCTTTCTCTACAAATAGGTGTCAAGGCCAAGGTCGAG
ACTCAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTCCGCCA
GGAGCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGCGTAAA
CGTCACGTCCCGACATATATCTCGTCATGTTTCCTTTGCTCCTTCCCCCG
TCAATTGTGATAGGAAAGCTGTATACATACTCTAGAGTGCAGTTGGAATC
GATTGAAGTCGCTGATGTATTCGGTGGGCCGTCTCTGATTAACGCCATCT
GCTTCCGACTTCCTGACTGTCCGGGGGTTGAATGGAGGTGCACGCGTGCT
TTTCTATACCAGTGCTACTATAAATTTTGTGAGCATTTATCTGTACTCTG
TATTATTGGTGATAGTGCGGAAAATAAGAGGGTGTCATTTTCTTTTCCA
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Coding sequence (CDS) from alignment at ACJE01000010.1:2548522..2549770+

>ASPNIDRAFT_207204-T1 ID=ASPNIDRAFT_207204-T1|Name=ASPNIDRAFT_207204-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1908bp|location=Sequence derived from alignment at ACJE01000010.1:2548522..2549770+ (Aspergillus niger ATCC 1015)
ATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGCGCCGTCCGCCCTTC
CGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCGGGTGCAGGCCCCCG
TTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCGCTTC
GGCGGTCACCACGAGGACGAGACATACGAGGAGTTCTCTGCCAGATTCGA
GAAGGAATTCGACGGTGTTCAGGATGTCTTCGAGCTCCAGCGTAATCTCA
ACAACTGCTTCGCCTACGATCTCGTTCCCTCCGTTGAGGTCCTTACCGCT
GCTCTGAAGGCTGCTCGTCGCGTCAACGACTACCCCACCGCTGTCCGGAT
CTTCGAGGGTGTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAGCAAT
ACCTTGAGGCCCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCTCCGT
GAGGAGCTCTACCCCGAGGAGGCGTAAATGTCGCCCATCTCCGTCTTCCG
CATCGCGACCCGCGCCGTCCGCCCTTCCGGCTTCATCAGAGCGGCTCAAT
TGCCCCGTCCCCGGGTGCAGGCCCCCGTTGCTCTGGCTATCGCCCGTCCC
AGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACCACGAGGACGAGAC
ATACGAGGAGTTCTCTGCCAGATTCGAGAAGGAATTCGACGGTGTTCAGG
ATGTCTTCGAGCTCCAGCGTAATCTCAACAACTGCTTCGCCTACGATCTC
GTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCGTCGCGT
CAACGACTACCCCACCGCTGTCCGGATCTTCGAGGGTGTCAAGGCCAAGG
TCGAGACTCAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTC
CGCCAGGAGCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGC
GTAAATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGCGCCGTCCGCC
CTTCCGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCGGGTGCAGGCC
CCCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCG
CTTCGGCGGTCACCACGAGGACGAGACATACGAGGAGTTCTCTGCCAGAT
TCGAGAAGGAATTCGACGGTGTTCAGGATGTCTTCGAGCTCCAGCGTAAT
CTCAACAACTGCTTCGCCTACGATCTCGTTCCCTCCGTTGAGGTCCTTAC
CGCTGCTCTGAAGGCTGCTCGTCGCGTCAACGACTACCCCACCGCTGTCC
GGATCTTCGAGGGTGTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAG
CAATACCTTGAGGCCCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCT
CCGTGAGGAGCTCTACCCCGAGGAGGCGTAAATGTCGCCCATCTCCGTCT
TCCGCATCGCGACCCGCGCCGTCCGCCCTTCCGGCTTCATCAGAGCGGCT
CAATTGCCCCGTCCCCGGGTGCAGGCCCCCGTTGCTCTGGCTATCGCCCG
TCCCAGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACCACGAGGACG
AGACATACGAGGAGTTCTCTGCCAGATTCGAGAAGGAATTCGACGGTGTT
CAGGATGTCTTCGAGCTCCAGCGTAATCTCAACAACTGCTTCGCCTACGA
TCTCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCGTC
GCGTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGGTGTCAAGGCC
AAGGTCGAGACTCAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGG
TCTCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGG
AGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX6ASPNIDRAFT_207204Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207204-T1ASPNIDRAFT_207204-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207204-T1.utr5p1ASPNIDRAFT_207204-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207204-T1.exon1ASPNIDRAFT_207204-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207204-T1.exon2ASPNIDRAFT_207204-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207204-T1.exon3ASPNIDRAFT_207204-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207204-T1.exon4ASPNIDRAFT_207204-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207204-T1.cdsASPNIDRAFT_207204-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207204-T1.utr3p1ASPNIDRAFT_207204-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926522L
DBxrefInterPro:IPR003204
DBxrefInterPro:IPR036545
DBxrefPFAM:PF02284
ProductCytochrome c oxidase subunit 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2548522..2549770 +
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