You are here

Home

ASPNIDRAFT_207611-T1, ASPNIDRAFT_207611-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_207611-T1
Unique NameASPNIDRAFT_207611-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2841599..2843029-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_207611-T1 ID=ASPNIDRAFT_207611-T1|Name=ASPNIDRAFT_207611-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1431bp|location=Sequence derived from alignment at ACJE01000021.1:2841599..2843029- (Aspergillus niger ATCC 1015)
ATGACCCCCCAAACCATAGTAATCGGCACCGGCCTCGCCGGCCTAACCAC
CACCAGCACCCTCCTAACGCACCACATCCCCGTGCTCCTGCTCGACCGCG
CCTCCAAACCCGGCGGCAATAGCATCAAAGCCTCCTCGGGTATAAATGCC
GCTCCGACGCGATATCAACTCGAACCGGATACCATCTCTGCATTTCAACA
CGACACTATCCTCTCCGCAGGAGTGCCGTATACCTCCGCCAGCGGGGTAG
AGCGCACCCGCCGTGAGAAACTCATCGACACGCTCACAACCAAGTCCGCG
GACGCGCTATACTGGCTTACGGATGACATCGGGGTCGACTTGAGTCGTGT
CGCTCGACTCGGAGGACATAGTGTATCCCGGACGCATCGGGGCGCGGGGA
AGGGAACACCAGGGTATGAGATAATCAGGGGGTTGTTGGGTCGGGTATCA
GAGGACAAGAATTGTCGGATGGAGGTTGGGAGACGGGTTACGAGGATATT
ACGGGAGGGAGGGGAAGGACGGGTAGTTGGGGTTGAGTATACGGTTACGG
ATGGAGAAGAAGGGGGCAATCAAACAAAGACAGAGACAGCGTACGGACCT
GTCGTCGTTGCGAGTGGAGGGTTTGCAGGCGATGCGAGAGGGCTGTTAGC
GCAGTATCGGCCCGATCTGGAGGGGATACCATCGACGAATGAGCAGCGCG
AAGGGACGCAGCCTTTGCTGCAGGAGGTTGGGGCAGCGGTGGTGGATATG
GAACAGGTGCAGGTGCATCCGACGGGGTTTGTGGGGGGGAAGGAAGAAGA
AGCGGAGGCGATGGTGAAGATATTGGCGGCGGAGGCGTTGAGAGGGGAAG
GGGGTATACTTGTGCTTGGGGACGGGAGGAGGTTTGTGAATGAATTGGAG
ACGAGAGAGAAGGTGACGGGGGAGGTTATGGCACAGGCGAAGAAGTTGCC
GACCAAGGCGAGGCAGTGGGATGTGAAGCTGGTGCTGGATGAGGGAGCAG
CAGCGGCGTTACAGTCGCATTTGGAGTTTTATATGTGGAAGGGGTTGATT
AAGAAGACGACGGTTGGGAAGATGGAGGAAATGTCGGCGCTGAAGGGGAC
GCTGAGGGAATATGCGGATGTAGTCGCTGGGAAGAAGCAGGATGAGTTTG
GACGGCAGTCGTTCGGAAACTGGACGCTGAGGGAGGTCAAGCCAGAGTCG
GTGGTGTATGTGGGAAAGGTTACGCCGGTTGTTCACTTTACCATGGGAGG
CGTGGTGATCAACGAGCGCAGCCAGGTGTTGGACGGTCAGGGGCAGCCGA
TTCCCGGGCTCTATGCGGCCGGCGAGATTACCGGAGGCCTTCATGGCCAG
AATCGGTTGGGGGGATCGTCGCTGTTGGAGTGCGCGGTCTTTGGCCGCAT
TGCCGGAGAGGAAGCGGCTGCTTATTATCAA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:2841599..2843029-

>ASPNIDRAFT_207611-T1 ID=ASPNIDRAFT_207611-T1|Name=ASPNIDRAFT_207611-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2390bp|location=Sequence derived from alignment at ACJE01000021.1:2841599..2843029- (Aspergillus niger ATCC 1015)
GGGACGCTGAGGGAATATGCGGATGTAGTCGCTGGGAAGAAGCAGGATGA
GTTTGGACGGCAGTCGTTCGGAAACTGGACGCTGAGGGAGGTCAAGCCAG
AGTCGGTGGTGTATGTGGGAAAGGTTACGCCGGTTGTTCACTTTACCATG
GGAGGCGTGGTGATCAACGAGCGCAGCCAGGTGTTGGACGGTCAGGGGCA
GCCGATTCCCGGGCTCTATGCGGCCGGCGAGATTACCGGAGGCCTTCATG
GCCAGAATCGGTTGGGGGGATCGTCGCTGTTGGAGTGCGCGGTCTTTGGC
CGCATTGCCGGAGAGGAAGCGGCTGCTTATTATCATGACCCCCCAAACCA
TAGTAATCGGCACCGGCCTCGCCGGCCTAACCACCACCAGCACCCTCCTA
ACGCACCACATCCCCGTGCTCCTGCTCGACCGCGCCTCCAAACCCGGCGG
CAATAGCATCAAAGCCTCCTCGGGTATAAATGCCGCTCCGACGCGATATC
AACTCGAACCGGATACCATCTCTGCATTTCAACACGACACTATCCTCTCC
GCAGGAGTGCCGTATACCTCCGCCAGCGGGGTAGAGCGCACCCGCCGTGA
GAAACTCATCGACACGCTCACAACCAAGTCCGCGGACGCGCTATACTGGC
TTACGGATGACATCGGGGTCGACTTGAGTCGTGTCGCTCGACTCGGAGGA
CATAGTGTATCCCGGACGCATCGGGGCGCGGGGAAGGGAACACCAGGGTA
TGAGATAATCAGGGGGTTGTTGGGTCGGGTATCAGAGGACAAGAATTGTC
GGATGGAGGTTGGGAGACGGGTTACGAGGATATTACGGGAGGGAGGGGAA
GGACGGGTAGTTGGGGTTGAGTATACGGTTACGGATGGAGAAGAAGGGGG
CAATCAAACAAAGACAGAGACAGCGTACGGACCTGTCGTCGTTGCGAGTG
GAGGGTTTGCAGGCGATGCGAGAGGGCTGTTAGCGCAGTATCGGCCCGAT
CTGGAGGGGATACCATCGACGAATGAGCAGCGCGAAGGGACGCAGCCTTT
GCTGCAGGAGGTTGGGGCAGCGGTGGTGGATATGGAACAGGTGCAGGTGC
ATCCGACGGGGTTTGTGGGGGGGAAGGAAGAAGAAGCGGAGGCGATGGTG
AAGATATTGGCGGCGGAGGCGTTGAGAGGGGAAGGGGGTATACTTGGGAC
GCTGAGGGAATATGCGGATGTAGTCGCTGGGAAGAAGCAGGATGAGTTTG
GACGGCAGTCGTTCGGAAACTGGACGCTGAGGGAGGTCAAGCCAGAGTCG
GTGGTGTATGTGGGAAAGGTTACGCCGGTTGTTCACTTTACCATGGGAGG
CGTGGTGATCAACGAGCGCAGCCAGGTGTTGGACGGTCAGGGGCAGCCGA
TTCCCGGGCTCTATGCGGCCGGCGAGATTACCGGAGGCCTTCATGGCCAG
AATCGGTTGGGGGGATCGTCGCTGTTGGAGTGCGCGGTCTTTGGCCGCAT
TGCCGGAGAGGAAGCGGCTGCTTATTATCATGACCCCCCAAACCATAGTA
ATCGGCACCGGCCTCGCCGGCCTAACCACCACCAGCACCCTCCTAACGCA
CCACATCCCCGTGCTCCTGCTCGACCGCGCCTCCAAACCCGGCGGCAATA
GCATCAAAGCCTCCTCGGGTATAAATGCCGCTCCGACGCGATATCAACTC
GAACCGGATACCATCTCTGCATTTCAACACGACACTATCCTCTCCGCAGG
AGTGCCGTATACCTCCGCCAGCGGGGTAGAGCGCACCCGCCGTGAGAAAC
TCATCGACACGCTCACAACCAAGTCCGCGGACGCGCTATACTGGCTTACG
GATGACATCGGGGTCGACTTGAGTCGTGTCGCTCGACTCGGAGGACATAG
TGTATCCCGGACGCATCGGGGCGCGGGGAAGGGAACACCAGGGTATGAGA
TAATCAGGGGGTTGTTGGGTCGGGTATCAGAGGACAAGAATTGTCGGATG
GAGGTTGGGAGACGGGTTACGAGGATATTACGGGAGGGAGGGGAAGGACG
GGTAGTTGGGGTTGAGTATACGGTTACGGATGGAGAAGAAGGGGGCAATC
AAACAAAGACAGAGACAGCGTACGGACCTGTCGTCGTTGCGAGTGGAGGG
TTTGCAGGCGATGCGAGAGGGCTGTTAGCGCAGTATCGGCCCGATCTGGA
GGGGATACCATCGACGAATGAGCAGCGCGAAGGGACGCAGCCTTTGCTGC
AGGAGGTTGGGGCAGCGGTGGTGGATATGGAACAGGTGCAGGTGCATCCG
ACGGGGTTTGTGGGGGGGAAGGAAGAAGAAGCGGAGGCGATGGTGAAGAT
ATTGGCGGCGGAGGCGTTGAGAGGGGAAGGGGGTATACTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207611ASPNIDRAFT_207611Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207611-T1ASPNIDRAFT_207611-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207611-T1.cdsASPNIDRAFT_207611-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207611-T1.utr3p1ASPNIDRAFT_207611-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207611-T1.exon2ASPNIDRAFT_207611-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207611-T1.exon1ASPNIDRAFT_207611-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR027477
DBxrefInterPro:IPR003953
DBxrefInterPro:IPR036188
DBxrefPFAM:PF13450
DBxrefPFAM:PF00890
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2841599..2843029 -
Powered by Drupal