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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:2539077..2539715+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_207718-T1 ID=ASPNIDRAFT_207718-T1|Name=ASPNIDRAFT_207718-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=639bp|location=Sequence derived from alignment at ACJE01000021.1:2539077..2539715+ (Aspergillus niger ATCC 1015)
GCACCGCCTAAACTCTTAGTTTCATTCCGGATATCGGTGGTAAAACACTT
TGCGACGCTCACTAGCGAATCCATCAGGCAGTTCTGTTTTTGGGCCGCAG
TCTATCAAAATGGGAGCTGTCAGGAAAATCAAGACGAAGCGCAGGACCAG
GTATGTAGGCTAATATCTTTAACGATGAACATGATTATGGCCCTAGGTAG
AAGGGTTGCGTAAAGCTGAATAGACGCTAATGATCTGATACAATCGACAG
AGACTATGATCAGGTCCGAGCTGATATCGCATCCGCGAGACACCTCGAGC
TGTACAAAGCTACGAAAGATGAGGAGGACCTTCCCGGCCTAGGAAAGCAT
TACTGCGTCGAGTGCTCCAAATGGTTTGAGAGCGAGCATAACATGGTCGC
CCATACGAAGGGCAAGAACCACAAGAGAAGGTGTGTGGCCAACATATCTA
TGATGTCGCTGCTGCAGGCGCAAGTACTTTCTGGACGCATAAATGCTAAC
CTATGCGCTCGTTGTTAGACTCCGCATCTTGCGCGAAGAGGCACACACAC
AGAAGGCTGCTGAGGCTGCTGTCGGCTTGGGTACAGACAATGGTGTGAGG
TCGCAAGAGACTACCGAGATGGTCATTATGGAGGATTAG back to topCoding sequence (CDS) from alignment at ACJE01000021.1:2539077..2539715+ >ASPNIDRAFT_207718-T1 ID=ASPNIDRAFT_207718-T1|Name=ASPNIDRAFT_207718-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1026bp|location=Sequence derived from alignment at ACJE01000021.1:2539077..2539715+ (Aspergillus niger ATCC 1015)
ATGGGAGCTGTCAGGAAAATCAAGACGAAGCGCAGGACCAGAGACTATGA
TCAGGTCCGAGCTGATATCGCATCCGCGAGACACCTCGAGCTGTACAAAG
CTACGAAAGATGAGGAGGACCTTCCCGGCCTAGGAAAGCATTACTGCGTC
GAGTGCTCCAAATGGTTTGAGAGCGAGCATAACATGGTCGCCCATACGAA
GGGCAAGAACCACAAGAGAAGACTCCGCATCTTGCGCGAAGAGGCACACA
CACAGAAGGCTGCTGAGGCTGCTGTCGGCTTGGGTACAGACAATGGTGTG
AGGTCGCAAGAGACTACCGAGATGGTCATTATGGAGGATTAGATGGGAGC
TGTCAGGAAAATCAAGACGAAGCGCAGGACCAGAGACTATGATCAGGTCC
GAGCTGATATCGCATCCGCGAGACACCTCGAGCTGTACAAAGCTACGAAA
GATGAGGAGGACCTTCCCGGCCTAGGAAAGCATTACTGCGTCGAGTGCTC
CAAATGGTTTGAGAGCGAGCATAACATGGTCGCCCATACGAAGGGCAAGA
ACCACAAGAGAAGACTCCGCATCTTGCGCGAAGAGGCACACACACAGAAG
GCTGCTGAGGCTGCTGTCGGCTTGGGTACAGACAATGGTGTGAGGTCGCA
AGAGACTACCGAGATGGTCATTATGGAGGATTAGATGGGAGCTGTCAGGA
AAATCAAGACGAAGCGCAGGACCAGAGACTATGATCAGGTCCGAGCTGAT
ATCGCATCCGCGAGACACCTCGAGCTGTACAAAGCTACGAAAGATGAGGA
GGACCTTCCCGGCCTAGGAAAGCATTACTGCGTCGAGTGCTCCAAATGGT
TTGAGAGCGAGCATAACATGGTCGCCCATACGAAGGGCAAGAACCACAAG
AGAAGACTCCGCATCTTGCGCGAAGAGGCACACACACAGAAGGCTGCTGA
GGCTGCTGTCGGCTTGGGTACAGACAATGGTGTGAGGTCGCAAGAGACTA
CCGAGATGGTCATTATGGAGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | InterPro:IPR022755 |
| DBxref | InterPro:IPR003604 |
| DBxref | PFAM:PF12171 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:2539077..2539715 + |
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