You are here

Home

ASPNIDRAFT_207787-T1, ASPNIDRAFT_207787-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_207787-T1
Unique NameASPNIDRAFT_207787-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2167605..2169821-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_207787-T1 ID=ASPNIDRAFT_207787-T1|Name=ASPNIDRAFT_207787-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2217bp|location=Sequence derived from alignment at ACJE01000021.1:2167605..2169821- (Aspergillus niger ATCC 1015)
CTCGAACAACGCTGCTCCACCGCTGCTTTTCCATTACCCAACGGCAACTG
CCAGTCACCCCATCCCTACATTCACCATTGAATTTTTATTCTTTTTTTAT
TACTGTTTTCTATTTTTTATTATCTCCCTTTTTTTCAAGAAGACAATAAA
TCTAATAAAAGGCTATACTCCGCACTGTTTCTGCCCAGATTTCTCTTTTC
TCCATCATTGCAATTTACCACTACAAACCTTACATCAGTTGCTGATCCGT
GGGTGAATTGGTGATTCGTTCGCCAATCCCCTTCTATACTACTAACTCCC
ACCACTGCGGGTTTCTTTGTATACAATCCTACACCTTGCAATGGCCACCT
CATCTATCATCACGCGCGGCTCCAGCTCCCTGGCCAATTTCACGGTCCGC
TCCCGCCCAAAAGTTGATATTATTCTCGCCAATCAAACGGATGGTCTGGT
CCCTTCATTCACCACCGGCGATACCATCAAAGGCACGGTTACCATCACGG
TCGATCATGACACTCGCTTTGATGACCTAGAGATCACATTTGAGGGTATG
TTGGCTCGCACAATACCAGAAGGTTACCAGGAATAGTCTTACTTACTGAC
TGGGTCAGGAACATCGAGGACCTCGGTGGAGCGCCAATCGATGCCCGGCC
GCACTGGGGCTTACCATACATTCCTCCGACTGCGACAGCCCATCGATGAG
ACCGCATATCCCACCCCCCGGGTTCTTGAACCCGGGCGCAACTACGAATT
CCCCTTCACCTTTGTCGTGCCCGAGCGTCTACTGCCTCATATCTGTAACC
ACGCCAAAACCAATCTGCATGTCGAACAATCGCACACGCTGCTGCCACCC
ACGTTTGGTGATCCCATGATTGCCAGCAACCGCAAATCGGTCATCGATGA
CATGGCCCCCGAAATGTGCCGCATCTCCTATCTAGTTCGTGTGACTCTCC
AGAAAAAGCCCATGGCCCAGAACGCCTCGCCGGTTACGCTAGTGTCTGTT
GGGAAAAAGGTGCGGGTCATTCCTGCGGTCGATGAGGAGCCACCCCTTAA
CGTGGAAGACAACGATGACTTGTACAGCGTCCGCAAAGAAAAGGATGTGA
AACGTGGTTTGATGAGGGGAAAGCTGGGCCGATTGGTGGTGGCCGCTGCA
CAGCCCAAGCCAGTGCGGTTGAGTCCATCCGACACCGGGAACTGCGATTC
TGTGAGTACCGTTGCCACTATGCAGCTGCGCTTCGATCCGGTGGGCGACG
AGCAGCCCCCTCGCCTAGGCACCGTATGGAGCAAACTTCGAGTGTCAACA
TTCTACAGCTCCGATCCTTGGGGAGATTATCCGTCTGCTACATGTATCAA
ATCCTGGGCGCAGATGGGGCGGGCCATGTACACCGAAACTGTACCACTGT
CCACCATGTGTGTTGCATCGGCACAATGGACAAAGCACACCGACGCCGAT
CTCGAACGCCGTGACTCCATGCACTCGACTTCGTCTACTGAATCTCTTCC
CGGCCCATCTGCCTCGTTCGCCGGAAACACCTACTATACCGCGTCGGTTG
TTGTTCCAATCACCCTCCCCAAAGCCAAGTCATTCGTGCCGACGTTCTAT
TCCTGTTTGATCGCGCGCGCCTACGCCCTGGAGCTCAGCATTTCCTATCA
CGCCGCTAATTCCAGGATCCTGACTCCCACCACATCCTTGAAGGTCCCAC
TGCAGCTGACTTGCGAGGCACAGCCAGGCGTCGGATCTAAGGGCACCGTG
GTCGACATTTCCCAGGATGAAGTGAACTCCCAATTTTTCAGCCCTCGCAG
CATTGCGCCCCCATCTGTCTCCGAGCTCGTCCCTATTGCACCACCCGAGT
ATACATCTGTCCAGGTCTCCAACCTGTCTCCTGACCGCTCGAGAATGTTA
CCACCATCGGTGACCAATTCGGGCAGTGTTAGAGTTTAGGGGCGCCGTGC
TACTGCGTTGCTGCCAGGGCAACACAGAATTTCAAAGGAGCGGATCCAGC
TGTTGTGTTCTTTTCTTTTCATTGGCGTTTTGGTTTCATATGGTTACAAT
ATACCCAGGTCGCTTGTTTGCAAATTACGAGCAGAAAAGTTTTGTCATTC
GGGGATACCCAGCATAATGTTGATTTACCAGGCATTGCATTTTACTTGAT
TGGGAAACTGTATCCCATTACTCATAATTAATTAATGGATAGTCGTTAGA
ATTGAATCATAACCAAC
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:2167605..2169821-

>ASPNIDRAFT_207787-T1 ID=ASPNIDRAFT_207787-T1|Name=ASPNIDRAFT_207787-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3072bp|location=Sequence derived from alignment at ACJE01000021.1:2167605..2169821- (Aspergillus niger ATCC 1015)
GAACATCGAGGACCTCGGTGGAGCGCCAATCGATGCCCGGCCGCACTGGG
GCTTACCATACATTCCTCCGACTGCGACAGCCCATCGATGAGACCGCATA
TCCCACCCCCCGGGTTCTTGAACCCGGGCGCAACTACGAATTCCCCTTCA
CCTTTGTCGTGCCCGAGCGTCTACTGCCTCATATCTGTAACCACGCCAAA
ACCAATCTGCATGTCGAACAATCGCACACGCTGCTGCCACCCACGTTTGG
TGATCCCATGATTGCCAGCAACCGCAAATCGGTCATCGATGACATGGCCC
CCGAAATGTGCCGCATCTCCTATCTAGTTCGTGTGACTCTCCAGAAAAAG
CCCATGGCCCAGAACGCCTCGCCGGTTACGCTAGTGTCTGTTGGGAAAAA
GGTGCGGGTCATTCCTGCGGTCGATGAGGAGCCACCCCTTAACGTGGAAG
ACAACGATGACTTGTACAGCGTCCGCAAAGAAAAGGATGTGAAACGTGGT
TTGATGAGGGGAAAGCTGGGCCGATTGGTGGTGGCCGCTGCACAGCCCAA
GCCAGTGCGGTTGAGTCCATCCGACACCGGGAACTGCGATTCTGTGAGTA
CCGTTGCCACTATGCAGCTGCGCTTCGATCCGGTGGGCGACGAGCAGCCC
CCTCGCCTAGGCACCGTATGGAGCAAACTTCGAGTGTCAACATTCTACAG
CTCCGATCCTTGGGGAGATTATCCGTCTGCTACATGTATCAAATCCTGGG
CGCAGATGGGGCGGGCCATGTACACCGAAACTGTACCACTGTCCACCATG
TGTGTTGCATCGGCACAATGGACAAAGCACACCGACGCCGATCTCGAACG
CCGTGACTCCATGCACTCGACTTCGTCTACTGAATCTCTTCCCGGCCCAT
CTGCCTCGTTCGCCGGAAACACCTACTATACCGCGTCGGTTGTTGTTCCA
ATCACCCTCCCCAAAGCCAAGTCATTCGTGCCGACGTTCTATTCCTGTTT
GATCGCGCGCGCCTACGCCCTGGAGCTCAGCATTTCCTATCACGCCGCTA
ATTCCAGGATCCTGACTCCCACCACATCCTTGAAGGTCCCACTGCAGCTG
ACTTGCGAGGCACAGCCAGGCGTCGGATCTAAGGGCACCGTGGTCGACAT
TTCCCAGGATGAAGTGAACTCCCAATTTTTCAGCCCTCGCAGCATTGCGC
CCCCATCTGTCTCCGAGCTCGTCCCTATTGCACCACCCGAGTATACATCT
GTCCAGGTCTCCAACCTGTCTCCTGACCGCTCGAGAATGTTACCACCATC
GGTGACCAATTCGGGCAGTGTTAGAGTTTAGATGGCCACCTCATCTATCA
TCACGCGCGGCTCCAGCTCCCTGGCCAATTTCACGGTCCGCTCCCGCCCA
AAAGTTGATATTATTCTCGCCAATCAAACGGATGGTCTGGTCCCTTCATT
CACCACCGGCGATACCATCAAAGGCACGGTTACCATCACGGTCGATCATG
ACACTCGCTTTGATGACCTAGAGATCACATTTGAGGGAACATCGAGGACC
TCGGTGGAGCGCCAATCGATGCCCGGCCGCACTGGGGCTTACCATACATT
CCTCCGACTGCGACAGCCCATCGATGAGACCGCATATCCCACCCCCCGGG
TTCTTGAACCCGGGCGCAACTACGAATTCCCCTTCACCTTTGTCGTGCCC
GAGCGTCTACTGCCTCATATCTGTAACCACGCCAAAACCAATCTGCATGT
CGAACAATCGCACACGCTGCTGCCACCCACGTTTGGTGATCCCATGATTG
CCAGCAACCGCAAATCGGTCATCGATGACATGGCCCCCGAAATGTGCCGC
ATCTCCTATCTAGTTCGTGTGACTCTCCAGAAAAAGCCCATGGCCCAGAA
CGCCTCGCCGGTTACGCTAGTGTCTGTTGGGAAAAAGGTGCGGGTCATTC
CTGCGGTCGATGAGGAGCCACCCCTTAACGTGGAAGACAACGATGACTTG
TACAGCGTCCGCAAAGAAAAGGATGTGAAACGTGGTTTGATGAGGGGAAA
GCTGGGCCGATTGGTGGTGGCCGCTGCACAGCCCAAGCCAGTGCGGTTGA
GTCCATCCGACACCGGGAACTGCGATTCTGTGAGTACCGTTGCCACTATG
CAGCTGCGCTTCGATCCGGTGGGCGACGAGCAGCCCCCTCGCCTAGGCAC
CGTATGGAGCAAACTTCGAGTGTCAACATTCTACAGCTCCGATCCTTGGG
GAGATTATCCGTCTGCTACATGTATCAAATCCTGGGCGCAGATGGGGCGG
GCCATGTACACCGAAACTGTACCACTGTCCACCATGTGTGTTGCATCGGC
ACAATGGACAAAGCACACCGACGCCGATCTCGAACGCCGTGACTCCATGC
ACTCGACTTCGTCTACTGAATCTCTTCCCGGCCCATCTGCCTCGTTCGCC
GGAAACACCTACTATACCGCGTCGGTTGTTGTTCCAATCACCCTCCCCAA
AGCCAAGTCATTCGTGCCGACGTTCTATTCCTGTTTGATCGCGCGCGCCT
ACGCCCTGGAGCTCAGCATTTCCTATCACGCCGCTAATTCCAGGATCCTG
ACTCCCACCACATCCTTGAAGGTCCCACTGCAGCTGACTTGCGAGGCACA
GCCAGGCGTCGGATCTAAGGGCACCGTGGTCGACATTTCCCAGGATGAAG
TGAACTCCCAATTTTTCAGCCCTCGCAGCATTGCGCCCCCATCTGTCTCC
GAGCTCGTCCCTATTGCACCACCCGAGTATACATCTGTCCAGGTCTCCAA
CCTGTCTCCTGACCGCTCGAGAATGTTACCACCATCGGTGACCAATTCGG
GCAGTGTTAGAGTTTAGATGGCCACCTCATCTATCATCACGCGCGGCTCC
AGCTCCCTGGCCAATTTCACGGTCCGCTCCCGCCCAAAAGTTGATATTAT
TCTCGCCAATCAAACGGATGGTCTGGTCCCTTCATTCACCACCGGCGATA
CCATCAAAGGCACGGTTACCATCACGGTCGATCATGACACTCGCTTTGAT
GACCTAGAGATCACATTTGAGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207787ASPNIDRAFT_207787Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207787-T1ASPNIDRAFT_207787-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207787-T1.cdsASPNIDRAFT_207787-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207787-T1.utr3p1ASPNIDRAFT_207787-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207787-T1.exon2ASPNIDRAFT_207787-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207787-T1.exon1ASPNIDRAFT_207787-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207787-T1.utr5p1ASPNIDRAFT_207787-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011021
DBxrefInterPro:IPR014752
DBxrefPFAM:PF00339
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2167605..2169821 -
Powered by Drupal