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ASPNIDRAFT_207896-T1, ASPNIDRAFT_207896-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_207896-T1
Unique NameASPNIDRAFT_207896-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1720528..1721511-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_207896-T1 ID=ASPNIDRAFT_207896-T1|Name=ASPNIDRAFT_207896-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=984bp|location=Sequence derived from alignment at ACJE01000021.1:1720528..1721511- (Aspergillus niger ATCC 1015)
CTATCCCCTCATCTCCCTCCTCCCTTGCAATTACTACATACGGGATGGTT
CTCTCATTCATTCTTGTGCAGAATCGCCAGTAAGTCATACCCCGCGTTCC
CCCGGAATGCCCCATCTCCATGCATGAAATACACCCCCTAACGCAGGAAC
AGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAGCGTAAGTGC
ACCCCTACTTGGATGGAATCGAATGACGGCTAATATTTTTGCTTTATGAT
AGGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGTTCGTTATATGCCCCGG
ACCACTACTATCTACTACTACGGCACCCCGCCGCGGAACGACATAATAAT
GTATGCTGGATAGGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACC
AGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGA
TATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACT
AGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCT
TTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGTGAGT
GATGCTAGAGGCTGGTGGAGTGGTGCCACCGGAATTGTTTGGAATGGGAA
AATAGGTAGCAGACGGATGAGCTGATGGTTGTGCAGGTATACGCTATTCT
GGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCG
TGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGAGGGAGATAATAT
GGGGGATATAGCAAGAAGGGGGAAGTATAAAGTATCGCTCTGTGGCGATA
CAATTGCATATATGACCACGGGATATGGTCAAGAGGAGTTAGGGGTTCAT
TAGGCTGATAAGTCTGGGCGTGTTTCTTTATATATCATTATTGCATGCGG
TTGCTTTCAACGTTGTACCGGTTCGCGACTGTTC
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Coding sequence (CDS) from alignment at ACJE01000021.1:1720528..1721511-

>ASPNIDRAFT_207896-T1 ID=ASPNIDRAFT_207896-T1|Name=ASPNIDRAFT_207896-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2190bp|location=Sequence derived from alignment at ACJE01000021.1:1720528..1721511- (Aspergillus niger ATCC 1015)
GTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAAC
AAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAAT
GAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTC
GTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTT
GTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCG
AGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTT
TGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAA
GCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTAT
AGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGTATACGCTATT
CTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGT
CGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGAGTACATCGCC
TGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAG
CGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGC
CTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATCCACT
TCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGAC
TTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGCGA
GGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAGCATGGTTCTC
TCATTCATTCTTGTGCAGAATCGCCAGTATACGCTATTCTGGACGAGGTG
TTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAG
GTTGGAACACTTGGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGC
GAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAG
GTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGC
AACCGACAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGG
TGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAAT
TTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGGGGAAGACGC
GGCTCGCGAAATGGTATGCGCCGTATAGCATGGTTCTCTCATTCATTCTT
GTGCAGAATCGCCAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGA
GAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTT
GGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAAT
ACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGG
AGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGA
ACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGT
TCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGAT
GAAGAAAAAGTCAAGCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAAT
GGTATGCGCCGTATAGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGC
CAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAA
ACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGA
ATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATT
TCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGG
TTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCT
CGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACG
TTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTC
AAGCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGT
ATAGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
APS2ASPNIDRAFT_207896Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207896-T1ASPNIDRAFT_207896-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207896-T1.cdsASPNIDRAFT_207896-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207896-T1.utr3p1ASPNIDRAFT_207896-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207896-T1.exon5ASPNIDRAFT_207896-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207896-T1.exon4ASPNIDRAFT_207896-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207896-T1.exon3ASPNIDRAFT_207896-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207896-T1.exon2ASPNIDRAFT_207896-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207896-T1.exon1ASPNIDRAFT_207896-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207896-T1.utr5p1ASPNIDRAFT_207896-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR022775
DBxrefInterPro:IPR016635
DBxrefPFAM:PF01217
ProductAP-2 complex subunit sigma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1720528..1721511 -
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