|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:1634708..1639402+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_207929-T1 ID=ASPNIDRAFT_207929-T1|Name=ASPNIDRAFT_207929-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=4695bp|location=Sequence derived from alignment at ACJE01000021.1:1634708..1639402+ (Aspergillus niger ATCC 1015) ATGACCGAACCCACGAAGATCAGCATCTTGGGTCGTGAGAGCATTGTCGC
TGATTTCGGTCTCTGGCGCAACTATGTCGCCAAGGACCTGATCAACGGCT
TGTCCTCCACGACCTACGTCCTCGTCACCGACACCAACATCGGTTCCCTC
TATACCCCGAGCTTCCAAAAGGCCTTCGAAGAGGCTGCTGCCGCCATCTC
CCCCAAACCTCGTTTGCTCGTCTACCATGCCGCACCCGGTGAAGTCTCCA
AGTCGAGACAGACAAAAGCCGACATTGAAGACTGGATGTTGAGCCAGAGC
CCGCCATGCGGTCGTGATACGGTGGTCATCGCTCTGGGCGGCGGTGTCAT
TGGAGATCTGACCGGCTTTGTCGCTTCGACTTACATGCGAGGCGTCCGCT
ATGTCCAGGTCCCCACAACACTTCTCGCCATGGTGGACTCTTCGATCGGC
GGAAAGACCGCCATTGACACGCCATTGGGCAAGAACTTGATCGGTGCGAT
CTGGCAGCCGTCGAGGATTTACATTGACCTGGAGTTCCTGGAGACGCTCC
CGGTTAGGGAGTTCATCAATGGTATGGCGGAGGTGATCAAGACCGCAGCC
ATCTCCAGCGAGGAGGAATTCACAGCCTTGGAGGACAACGCCGAGACGAT
ATTGTCCGCCGTCCGCCGTGTAATCCAACCCGGACAGCGCCGTTTCGAAG
GCATTGGGGACATTCTGAAGGCGAGAATTCTGGCGTCCGCTAGACACAAG
GCGTTTGTCGTCTCCGCGGACGAGCGCGAAGGTGGTCTCCGGAACTTGTT
GAACTGGGGTCACTCCATTGGTCATGCCATTGAGGCCATCTTGACCCCTC
AGGTTCTCCACGGAGAATGTGTTGCCATTGGTATGGTGAAGGAGGCCGAA
TTGGCCCGCCATCTCGGCATCTTGAAGGGCGTTGCCGTGGCTCGCATTGT
TAAGTGCCTTTCTGCCTATGGCCTGCCAACCTCACTGAAGGATGCCCGGA
TCAAGAAGCTCACCGCAGGAAAGCATTGCTCCGTCGATCAGTTGCTCTTC
AACATGGCTCTGGACAAGAAGAATGACGGTCCCAAGAAAAAGGTCGTTCT
ACTCTCTGCCATCGGACGCACTTACGAACCACACGCCAGCGTTGTCCCGA
ATGAAGATATCAGCGTCGTTCTGGCCCCCAGTATCGAGGTCTACCCCGGC
GTCGCAACCTCCTCGAACGTCGTCTGCACTCCTCCGGGCTCCAAGAGTAT
TTCCAACCGGGCTCTGGTGCTGGCCGCTCTCGGTTCGGGTACTTGCCGTA
TCAAGAACCTGCTGCACTCCGACGACACCGAGGTGATGCTCAACGCTTTG
GAGCGTCTGGGCGCTTGCACCTTCTCCTGGGAAGAGGAAGGCGAGGTGCT
CGTCGTCAACGGCAAGGGAGGTGACCTTCAGGCCACTTCCCACCCTCTCT
ACCTGGGAAATGCTGGTACCGCTTCCAGATTCCTCACCACTGTCGCTACC
CTTGCCACTCCCACTGACGTGGACTCGAACGTGCTTACGGGCAACAACCG
CATGAAGCAGAGACCGATTGGCGACTTGGTCGATGCCCTGACCGCGAACG
GTGCCTCGGTCGAGTACATGGAGAGAAAGGGTAGCCTTCCCCTGAAGATC
GCTGCCTCGGGTGGTTTTGCGGGTGGTCAGATTAACCTTGCCGCGAAGGT
GTCTTCCCAGTATGTCTCCTCGTTGCTGATGTGCGCTCCGTACGCCAAGG
AGCCGGTCACCCTGAAGCTGGTGGGCGGAAAGCCCATCTCCCAGCCCTAT
ATCGACATGACCACGGCCATGATGCGATCTTTCGGCATCGACGTAAAGAA
GTCTACCACTGAGGAGCACACCTACCACATTCCTCAGGGCCGTTACGTCA
ACCCTGCTGAGTATATGGTGGAAAGCGATGCCAGTTCGGCTACTTACCCC
CTGGCCATTGCGGCGATTACCGGCACTACCTGCACTGTGCCCAACATCGG
TTCCAAGTCCCTCCAGGGTGATGCTCGCTTTGCCGTCGATGTTCTTCGTC
CCATGGGCTGTACTGTTGAGCAAACAGACAGCTCCACTACCGTCACTGGA
GCCCCTGGGGGTGTATTGCGACCCCTGCCCAATGTCGATATGGAACCTAT
GACCGACGCTTTCCTCACGGCTTCCGTGCTCGCGGCTGTCGCACGCGGCG
ATGGCTCAAACCACACGACCCGGATCTACGGAATTGCCAACCAGCGTGTG
AAGGAATGCAACCGTATCAAGGCCATGAAGGACGAACTCGCCAAGTTCGG
TGTCGTCTGTCGTGAACATGACGACGGCATTGAGATCGATGGCATTGACC
GCACCAGTCTGCGTCAGCCTGCCGGAGGCGTCTTCTGCTACGACGACCAC
CGCGTCGCGTTCAGCTTCAGCGTTCTTTCTCTCGTCACTCCTCAGTCGAC
TTTGATTCTGGAGAGAGAATGTGTCGGCAAGACTTGGCCCGGCTGGTGGG
ACTCTCTGAAGCAGCTGTTCTCCGTGAAGCTGGAGGGTAAGGAGCTGAAA
GAGGACGAAGCTGCGGTTCTCACGCAAGCTGAGAAGTCCAGTGCGTCCAT
TTTCATTATCGGCATGCGTGGCGCGGGAAAGACCACCAGCGGACAGTGGG
TTGCAAAGACTCTCAACCGTCCATTCCTTGACCTCGACACCGAGCTTGAG
GCTTCGGAGGGAATGAGTATCCCCGACATTATCAAGCAACGTGGGTGGCA
GGGTTTCAGAGATGCTGAGCTTAGTCTTTTGCAGCGCACGTTGAAGGACC
GCTCAACTGGCTATGTCTTCGCTTGCGGTGGCGGTATCGTGGAGATCCCG
GAGGCGAGAAAGTTGCTTACCGATTACCACAAGACCAAGGGTAACGTTCT
GCTCATTATGCGGGATATCAAGCACGTCATGGACTTCCTCTCCATTGACA
AGACCCGCCCAGCTTATGTTGAAGATATGATGGGAGTCTGGCTGCGCCGG
AAGCCCTGGTTCCAGGAGTGCAGCAACATTCAGTATTACAGCCAGACTGC
CGTCTCTGGCGGTCTTGCTCGGGCATCTGAAGACTTCAAGCGCTTCCTCC
GGACTGTTACCGGAGAGGTCGACAGTCTTAGCAGCATCAAGCGCAAGGAA
CATTCGTTCTTTGTCTCTTTGACTCTGCCAGATCTCCGTAATGCGAGCGA
TATTTTGAAGAAGGTATGCGTCGGTTCCGATGCAGTGGAGCTCCGTGTCG
ATCTTCTGGAAGATCCGACGATGGACGGTGACATTCCTTCCGTCGACTAT
GTCGCCGAGCAGCTGTCTTTCCTGCGCAGCCACATCACCCTCCCTGTCAT
CTACACCATCCGCACCAAGAGTCAGGGTGGTCGCTTCCCCGACGACGCCC
ATGCTGAGGCCTTGGAGCTCTACCGCCTTGCGTTCCGATCTGGACTTGAG
TTCGTGGATCTGGAGATTGCTTTCCCCGACGAGATGCTGCGCACCGTCAC
GGAGCAGAAGGGCTATTCTCGCATCATTGCGTCGCACCACGACCCCAAGG
GTGAGCTCTCCTGGAGTAACATGTCGTGGACGAAGTACTACAACCGTGCG
TTGGAGTACGGTGATGTTATTAAGCTCGTCGGAGTTGCAAAGAACCTGGA
CGACAACAACGCTCTGAGAAGCTTCAAGAACTGGGCTGCCAGTGCTCATG
ATGTTCCCTTGATTGCCATCAACATGGGCGACAACGGACAGCTCAGTCGC
ATCCTGAACGGCTTCATGACCCCCGTGTCCCACCCTAGCCTTCCGTTCAA
GGCGGCACCCGGCCAGCTTTCCGCGGCTGAGATCCGCCGGGGTCTGTCTC
TGATGGGAGAGATCCAGCCCAAGAAGTTTGCCGTTTTTGGCACACCCATC
TCCCAGTCCCGTTCTCCTGCTCTCCACAACACCCTGTTTGCCCAGAGTGG
TCTGCCTCACGAGTACAGCCGCTTGGAAACCGCCAAGGCCGAAGATGTTA
AGGACTTCATCCGCTCCCCCAACTTTGGCGGCGCCTCGGTCACGATCCCC
CTGAAGCTGGACATCATGCCATTGCTGGACGAGATCGCACCCGACGCCGA
AATCATCGGTGCGGTGAACACGATTGTGCCTGTTTCCAGGGGTAAGGGCC
AGCCGGCTCGCTTGGTTGGTTACAACACGGACTGGCAGGGCATGACGCTG
TCGCTGCGCAACGCGGGTGTGTACGGATGCAGTGGAGACGCCAGCGCCAT
GGTGGTGGGTGGTGGCGGCACCGCTCGCGCCGCCATCTATGCTCTGCACA
ACATGGGCTACTCCCCGATCTACATCGTTGGTCGAACCCCCGCAAAGCTT
GAGAGTATGGTTCAGACTTTCCCCAGCAGCTACAACATTCGCATCGTCGA
CACCATCGATGCGCTGGATACGATTCCCAAGGTGGCCATTGGCACGATCC
CGGCCGACAAGCCGATCGATTCGGGCATGCGCGAGACGCTGTGCCACATG
TTCGCTCGGGCTCAGGAGATTGATGCTGATATTGTCAAGTCTGTGGAGAA
GGTGCCTCGCGTGCTGGTGGAAATGGCCTACAAGCCGTCGGTGACGACGC
TGATGCAACTGGCCAACGACGCAGGATGGCACACAGTTCCTGGTCTGGAG
GTTCTGGTTGGCCAGGGATGGTACCAGGTAGGTTCTGCCGGGTGA back to topCoding sequence (CDS) from alignment at ACJE01000021.1:1634708..1639402+ >ASPNIDRAFT_207929-T1 ID=ASPNIDRAFT_207929-T1|Name=ASPNIDRAFT_207929-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4695bp|location=Sequence derived from alignment at ACJE01000021.1:1634708..1639402+ (Aspergillus niger ATCC 1015) ATGACCGAACCCACGAAGATCAGCATCTTGGGTCGTGAGAGCATTGTCGC TGATTTCGGTCTCTGGCGCAACTATGTCGCCAAGGACCTGATCAACGGCT TGTCCTCCACGACCTACGTCCTCGTCACCGACACCAACATCGGTTCCCTC TATACCCCGAGCTTCCAAAAGGCCTTCGAAGAGGCTGCTGCCGCCATCTC CCCCAAACCTCGTTTGCTCGTCTACCATGCCGCACCCGGTGAAGTCTCCA AGTCGAGACAGACAAAAGCCGACATTGAAGACTGGATGTTGAGCCAGAGC CCGCCATGCGGTCGTGATACGGTGGTCATCGCTCTGGGCGGCGGTGTCAT TGGAGATCTGACCGGCTTTGTCGCTTCGACTTACATGCGAGGCGTCCGCT ATGTCCAGGTCCCCACAACACTTCTCGCCATGGTGGACTCTTCGATCGGC GGAAAGACCGCCATTGACACGCCATTGGGCAAGAACTTGATCGGTGCGAT CTGGCAGCCGTCGAGGATTTACATTGACCTGGAGTTCCTGGAGACGCTCC CGGTTAGGGAGTTCATCAATGGTATGGCGGAGGTGATCAAGACCGCAGCC ATCTCCAGCGAGGAGGAATTCACAGCCTTGGAGGACAACGCCGAGACGAT ATTGTCCGCCGTCCGCCGTGTAATCCAACCCGGACAGCGCCGTTTCGAAG GCATTGGGGACATTCTGAAGGCGAGAATTCTGGCGTCCGCTAGACACAAG GCGTTTGTCGTCTCCGCGGACGAGCGCGAAGGTGGTCTCCGGAACTTGTT GAACTGGGGTCACTCCATTGGTCATGCCATTGAGGCCATCTTGACCCCTC AGGTTCTCCACGGAGAATGTGTTGCCATTGGTATGGTGAAGGAGGCCGAA TTGGCCCGCCATCTCGGCATCTTGAAGGGCGTTGCCGTGGCTCGCATTGT TAAGTGCCTTTCTGCCTATGGCCTGCCAACCTCACTGAAGGATGCCCGGA TCAAGAAGCTCACCGCAGGAAAGCATTGCTCCGTCGATCAGTTGCTCTTC AACATGGCTCTGGACAAGAAGAATGACGGTCCCAAGAAAAAGGTCGTTCT ACTCTCTGCCATCGGACGCACTTACGAACCACACGCCAGCGTTGTCCCGA ATGAAGATATCAGCGTCGTTCTGGCCCCCAGTATCGAGGTCTACCCCGGC GTCGCAACCTCCTCGAACGTCGTCTGCACTCCTCCGGGCTCCAAGAGTAT TTCCAACCGGGCTCTGGTGCTGGCCGCTCTCGGTTCGGGTACTTGCCGTA TCAAGAACCTGCTGCACTCCGACGACACCGAGGTGATGCTCAACGCTTTG GAGCGTCTGGGCGCTTGCACCTTCTCCTGGGAAGAGGAAGGCGAGGTGCT CGTCGTCAACGGCAAGGGAGGTGACCTTCAGGCCACTTCCCACCCTCTCT ACCTGGGAAATGCTGGTACCGCTTCCAGATTCCTCACCACTGTCGCTACC CTTGCCACTCCCACTGACGTGGACTCGAACGTGCTTACGGGCAACAACCG CATGAAGCAGAGACCGATTGGCGACTTGGTCGATGCCCTGACCGCGAACG GTGCCTCGGTCGAGTACATGGAGAGAAAGGGTAGCCTTCCCCTGAAGATC GCTGCCTCGGGTGGTTTTGCGGGTGGTCAGATTAACCTTGCCGCGAAGGT GTCTTCCCAGTATGTCTCCTCGTTGCTGATGTGCGCTCCGTACGCCAAGG AGCCGGTCACCCTGAAGCTGGTGGGCGGAAAGCCCATCTCCCAGCCCTAT ATCGACATGACCACGGCCATGATGCGATCTTTCGGCATCGACGTAAAGAA GTCTACCACTGAGGAGCACACCTACCACATTCCTCAGGGCCGTTACGTCA ACCCTGCTGAGTATATGGTGGAAAGCGATGCCAGTTCGGCTACTTACCCC CTGGCCATTGCGGCGATTACCGGCACTACCTGCACTGTGCCCAACATCGG TTCCAAGTCCCTCCAGGGTGATGCTCGCTTTGCCGTCGATGTTCTTCGTC CCATGGGCTGTACTGTTGAGCAAACAGACAGCTCCACTACCGTCACTGGA GCCCCTGGGGGTGTATTGCGACCCCTGCCCAATGTCGATATGGAACCTAT GACCGACGCTTTCCTCACGGCTTCCGTGCTCGCGGCTGTCGCACGCGGCG ATGGCTCAAACCACACGACCCGGATCTACGGAATTGCCAACCAGCGTGTG AAGGAATGCAACCGTATCAAGGCCATGAAGGACGAACTCGCCAAGTTCGG TGTCGTCTGTCGTGAACATGACGACGGCATTGAGATCGATGGCATTGACC GCACCAGTCTGCGTCAGCCTGCCGGAGGCGTCTTCTGCTACGACGACCAC CGCGTCGCGTTCAGCTTCAGCGTTCTTTCTCTCGTCACTCCTCAGTCGAC TTTGATTCTGGAGAGAGAATGTGTCGGCAAGACTTGGCCCGGCTGGTGGG ACTCTCTGAAGCAGCTGTTCTCCGTGAAGCTGGAGGGTAAGGAGCTGAAA GAGGACGAAGCTGCGGTTCTCACGCAAGCTGAGAAGTCCAGTGCGTCCAT TTTCATTATCGGCATGCGTGGCGCGGGAAAGACCACCAGCGGACAGTGGG TTGCAAAGACTCTCAACCGTCCATTCCTTGACCTCGACACCGAGCTTGAG GCTTCGGAGGGAATGAGTATCCCCGACATTATCAAGCAACGTGGGTGGCA GGGTTTCAGAGATGCTGAGCTTAGTCTTTTGCAGCGCACGTTGAAGGACC GCTCAACTGGCTATGTCTTCGCTTGCGGTGGCGGTATCGTGGAGATCCCG GAGGCGAGAAAGTTGCTTACCGATTACCACAAGACCAAGGGTAACGTTCT GCTCATTATGCGGGATATCAAGCACGTCATGGACTTCCTCTCCATTGACA AGACCCGCCCAGCTTATGTTGAAGATATGATGGGAGTCTGGCTGCGCCGG AAGCCCTGGTTCCAGGAGTGCAGCAACATTCAGTATTACAGCCAGACTGC CGTCTCTGGCGGTCTTGCTCGGGCATCTGAAGACTTCAAGCGCTTCCTCC GGACTGTTACCGGAGAGGTCGACAGTCTTAGCAGCATCAAGCGCAAGGAA CATTCGTTCTTTGTCTCTTTGACTCTGCCAGATCTCCGTAATGCGAGCGA TATTTTGAAGAAGGTATGCGTCGGTTCCGATGCAGTGGAGCTCCGTGTCG ATCTTCTGGAAGATCCGACGATGGACGGTGACATTCCTTCCGTCGACTAT GTCGCCGAGCAGCTGTCTTTCCTGCGCAGCCACATCACCCTCCCTGTCAT CTACACCATCCGCACCAAGAGTCAGGGTGGTCGCTTCCCCGACGACGCCC ATGCTGAGGCCTTGGAGCTCTACCGCCTTGCGTTCCGATCTGGACTTGAG TTCGTGGATCTGGAGATTGCTTTCCCCGACGAGATGCTGCGCACCGTCAC GGAGCAGAAGGGCTATTCTCGCATCATTGCGTCGCACCACGACCCCAAGG GTGAGCTCTCCTGGAGTAACATGTCGTGGACGAAGTACTACAACCGTGCG TTGGAGTACGGTGATGTTATTAAGCTCGTCGGAGTTGCAAAGAACCTGGA CGACAACAACGCTCTGAGAAGCTTCAAGAACTGGGCTGCCAGTGCTCATG ATGTTCCCTTGATTGCCATCAACATGGGCGACAACGGACAGCTCAGTCGC ATCCTGAACGGCTTCATGACCCCCGTGTCCCACCCTAGCCTTCCGTTCAA GGCGGCACCCGGCCAGCTTTCCGCGGCTGAGATCCGCCGGGGTCTGTCTC TGATGGGAGAGATCCAGCCCAAGAAGTTTGCCGTTTTTGGCACACCCATC TCCCAGTCCCGTTCTCCTGCTCTCCACAACACCCTGTTTGCCCAGAGTGG TCTGCCTCACGAGTACAGCCGCTTGGAAACCGCCAAGGCCGAAGATGTTA AGGACTTCATCCGCTCCCCCAACTTTGGCGGCGCCTCGGTCACGATCCCC CTGAAGCTGGACATCATGCCATTGCTGGACGAGATCGCACCCGACGCCGA AATCATCGGTGCGGTGAACACGATTGTGCCTGTTTCCAGGGGTAAGGGCC AGCCGGCTCGCTTGGTTGGTTACAACACGGACTGGCAGGGCATGACGCTG TCGCTGCGCAACGCGGGTGTGTACGGATGCAGTGGAGACGCCAGCGCCAT GGTGGTGGGTGGTGGCGGCACCGCTCGCGCCGCCATCTATGCTCTGCACA ACATGGGCTACTCCCCGATCTACATCGTTGGTCGAACCCCCGCAAAGCTT GAGAGTATGGTTCAGACTTTCCCCAGCAGCTACAACATTCGCATCGTCGA CACCATCGATGCGCTGGATACGATTCCCAAGGTGGCCATTGGCACGATCC CGGCCGACAAGCCGATCGATTCGGGCATGCGCGAGACGCTGTGCCACATG TTCGCTCGGGCTCAGGAGATTGATGCTGATATTGTCAAGTCTGTGGAGAA GGTGCCTCGCGTGCTGGTGGAAATGGCCTACAAGCCGTCGGTGACGACGC TGATGCAACTGGCCAACGACGCAGGATGGCACACAGTTCCTGGTCTGGAG GTTCTGGTTGGCCAGGGATGGTACCAGGTAGGTTCTGCCGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
| GO:0055114 | oxidation-reduction process |
| GO:0009073 | aromatic amino acid family biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0004765 | shikimate kinase activity |
| GO:0003856 | 3-dehydroquinate synthase activity |
| GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
| GO:0003866 | 3-phosphoshikimate 1-carboxyvinyltransferase activity |
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| GO:0003824 | catalytic activity |
| GO:0003855 | 3-dehydroquinate dehydratase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013792 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR000623 |
| DBxref | InterPro:IPR023000 |
| DBxref | InterPro:IPR023193 |
| DBxref | InterPro:IPR018508 |
| DBxref | InterPro:IPR008289 |
| DBxref | InterPro:IPR016037 |
| DBxref | InterPro:IPR001986 |
| DBxref | InterPro:IPR010110 |
| DBxref | InterPro:IPR013708 |
| DBxref | InterPro:IPR031322 |
| DBxref | InterPro:IPR006264 |
| DBxref | InterPro:IPR030960 |
| DBxref | InterPro:IPR036968 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR001381 |
| DBxref | PFAM:PF01202 |
| DBxref | PFAM:PF08501 |
| DBxref | PFAM:PF13685 |
| DBxref | PFAM:PF00275 |
| DBxref | PFAM:PF01761 |
| DBxref | PFAM:PF01487 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ACJE01000021.1 | supercontig | ACJE01000021.1:1634708..1639402 + |
|