You are here

Home

ASPNIDRAFT_207990-T1, ASPNIDRAFT_207990-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_207990-T1
Unique NameASPNIDRAFT_207990-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1511739..1512825+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_207990-T1 ID=ASPNIDRAFT_207990-T1|Name=ASPNIDRAFT_207990-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1087bp|location=Sequence derived from alignment at ACJE01000021.1:1511739..1512825+ (Aspergillus niger ATCC 1015)
CGCAATGGATCCTTTTTCTGCAGAGGGTGGTATGTTTTGTCCATTGAGCA
AACACACACATACAATCCCCCCTTATGACCTCAAAGCGCTAACTTGCCTC
ATCCCCCCAATAACAGAGCTAATCAACATCCACAATGCCTTTCACCAAGG
CCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTATCCCCCGAGA
ACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAGGC
CAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACCCCCGA
TCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGCCGAAT
CGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCCGACAATGCT
ACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAAAGTGA
GGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCGAGGCGTGAG
TTTTAGCCGTCAATTTGCCATGTGCACTGTCTGTATAATGGGTGGAACTC
AGGAAGCTAATGGACAATGATATAGTGTGGCCTTGATCGTCCAGATTCAT
CTTCAGCAGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCTGCAAA
GCGCTGGGCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTGGGTGG
GAATGAGAGTGGTATGTGTCACACCCTGCTGCAGCCTCCTTGCTGTTTGT
TCGAGGGTAAGCGATGAAACTAATATGCTGTTGCTTCGGCTTTTAGGGCG
GCGAGAAATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCT
CCTAGCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACT
CCATCTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGC
AGCAGTATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAAC
GTCTTGGCTGGCAAGCCCTCGGAAGAGTTGGAGCAGTACGTTCACCCTCC
TACCCCTAAACCCATCGATCTGCGGACGAATGTGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1511739..1512825+

>ASPNIDRAFT_207990-T1 ID=ASPNIDRAFT_207990-T1|Name=ASPNIDRAFT_207990-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3324bp|location=Sequence derived from alignment at ACJE01000021.1:1511739..1512825+ (Aspergillus niger ATCC 1015)
ATGGATCCTTTTTCTGCAGAGGGTGAGCTAATCAACATCCACAATGCCTT
TCACCAAGGCCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTAT
CCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATC
GCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGA
GACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAG
ATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCC
GACAATGCTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGG
ACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCG
AGGCTGTGGCCTTGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGAT
CTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCT
CTTGGTTAACTTGGCTGAGTCGTGGGTGGGAATGAGAGTGGGCGGCGAGA
AATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTAGC
AGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCATCT
CGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCAGT
ATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCTTG
GCTGGCAAGCCCTCGGAAGAGTTGGAGCAGTACGTTCACCCTCCTACCCC
TAAACCCATCGATCTGCGGACGAATGTGTAGATGGATCCTTTTTCTGCAG
AGGGTGAGCTAATCAACATCCACAATGCCTTTCACCAAGGCCAATACCAA
GCCGTAATCGAATTCGACACCTCCGCTCTATCCCCCGAGAACCAACTCCC
TGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAGGCCAATCAGATG
AAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACCCCCGATCTAGCGGCC
GTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGCCGAATCGGCGTTGAA
GCTGGCTCAGGACCTTGCGGAGAATTACCCCGACAATGCTACTGTACAGG
TTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAAAGTGAGGATGCGTTG
GCTTTATTGACCAAGCATCAGGGGAACCTCGAGGCTGTGGCCTTGATCGT
CCAGATTCATCTTCAGCAGAACCGCTCTGATCTCGCCTTGAAGGAAGTCC
AGGCTGCAAAGCGCTGGGCGCAGGATTCCCTCTTGGTTAACTTGGCTGAG
TCGTGGGTGGGAATGAGAGTGGGCGGCGAGAAATACCAGGCTGCATTCTA
CGTCTACGAGGAATTGGCTTCCGCTCCTAGCAGCTCCGCGCCCCTCTCTA
TCGTTGGTCAGGCCGTGGCAGAACTCCATCTCGGTCGGTTGCCTGAGGCC
GAGGCCGCCTTGACTGCAGCTCTGCAGCAGTATCCCGACGAGGCGGAACT
GATTGCGAACACTGTTGTGCTGAACGTCTTGGCTGGCAAGCCCTCGGAAG
AGTTGGAGCAGTACGTTCACCCTCCTACCCCTAAACCCATCGATCTGCGG
ACGAATGTGTAGATGGATCCTTTTTCTGCAGAGGGTGAGCTAATCAACAT
CCACAATGCCTTTCACCAAGGCCAATACCAAGCCGTAATCGAATTCGACA
CCTCCGCTCTATCCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTT
CGCGCCAAGATCGCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTCGA
AGGCGAGGAAGAGACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGC
AGTCGACTGGAGATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCG
GAGAATTACCCCGACAATGCTACTGTACAGGTTCTGTGCGGGACGTTGCT
GCAGGCTCAGGGACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCATC
AGGGGAACCTCGAGGCTGTGGCCTTGATCGTCCAGATTCATCTTCAGCAG
AACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGCTGGGC
GCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGAATGAGAG
TGGGCGGCGAGAAATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCT
TCCGCTCCTAGCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGC
AGAACTCCATCTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAG
CTCTGCAGCAGTATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTG
CTGAACGTCTTGGCTGGCAAGCCCTCGGAAGAGTTGGAGCAGTACGTTCA
CCCTCCTACCCCTAAACCCATCGATCTGCGGACGAATGTGTAGATGGATC
CTTTTTCTGCAGAGGGTGAGCTAATCAACATCCACAATGCCTTTCACCAA
GGCCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTATCCCCCGA
GAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAG
GCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACCCCC
GATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGCCGA
ATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCCGACAATG
CTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAAAGT
GAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCGAGGCTGT
GGCCTTGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGATCTCGCCT
TGAAGGAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCTCTTGGTT
AACTTGGCTGAGTCGTGGGTGGGAATGAGAGTGGGCGGCGAGAAATACCA
GGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTAGCAGCTCCG
CGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCATCTCGGTCGG
TTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCAGTATCCCGA
CGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCTTGGCTGGCA
AGCCCTCGGAAGAGTTGGAGCAGTACGTTCACCCTCCTACCCCTAAACCC
ATCGATCTGCGGACGAATGTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207990ASPNIDRAFT_207990Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207990-T1ASPNIDRAFT_207990-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207990-T1.utr5p1ASPNIDRAFT_207990-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207990-T1.exon1ASPNIDRAFT_207990-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207990-T1.exon2ASPNIDRAFT_207990-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207990-T1.exon3ASPNIDRAFT_207990-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207990-T1.exon4ASPNIDRAFT_207990-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207990-T1.cdsASPNIDRAFT_207990-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR006822
DBxrefInterPro:IPR011990
DBxrefPFAM:PF13174
DBxrefPFAM:PF13432
DBxrefPFAM:PF04733
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1511739..1512825 +
Powered by Drupal