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ASPNIDRAFT_208078-T1, ASPNIDRAFT_208078-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_208078-T1
Unique NameASPNIDRAFT_208078-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1245641..1247352-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_208078-T1 ID=ASPNIDRAFT_208078-T1|Name=ASPNIDRAFT_208078-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1712bp|location=Sequence derived from alignment at ACJE01000021.1:1245641..1247352- (Aspergillus niger ATCC 1015)
CTTCGCTGCGTGGGAGCTCAACTCCGTCCAGTGCCTACCTTGAGCTGCTA
CAGCTTTGGCGCCGTGTTTTGACCCATTGGTACGTTGCACTTTGCGTGAC
CTGTTCTTCGCACATGCTGTGGCATTGAACCCGGGCTAACAGAGCTTCCA
ACCTTTAGACTTCGCCGTCTTTGAGCTCGAGAAAACCTTTTTGTGGGCAA
GCTCCAACATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGC
AATGCTACGGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGA
CAGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGG
AGGCAGAGGCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAG
ATCCCGGATTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTG
CTATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCT
TCTGGCTCGCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAG
ACCGTCCCTTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCAT
CGTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCG
GCCACCAGGCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGG
ATCTGCCATTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCA
CGGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCG
TGCCCAAGACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCAC
GAACTCAATGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCT
CCTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCA
CCGGTCACAACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAG
CAGAACGGCTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCT
GTACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTG
CCATTGTCGGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATG
AACCTTCTGGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCT
GGGTAAGTTACTTTCTTCACAAACTGGCACAATTGCTGGAACGAATACTG
ACCTAAAGATATAGTCGCCATCACCTACCTCCAGCACACCGATCCCACTC
TCCCCCACTACCAGCCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCC
ACCATCGACCGTGACTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTAT
CATTGAGACCCACGTTCTCCACCACTATGTCAGCACCATCCCCTTCTACA
ACGCCGATGAGGCCAGCGAGGCCATCAAGAAGGTCATGGGATCTCACTAC
CGGACCGAAGCCCACACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGAC
TAGTGCCCGTGTGTGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTG
AGAGCTCTGGAGTGCTCTTCTACCGTAACACGAACGGCATTGGAGTTCCT
CCTGCCAAGCTTGAAAAATAGAGCATGTCTGTCGTACATAGAACGAGTGA
TATCTTTTTTTC
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Coding sequence (CDS) from alignment at ACJE01000021.1:1245641..1247352-

>ASPNIDRAFT_208078-T1 ID=ASPNIDRAFT_208078-T1|Name=ASPNIDRAFT_208078-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2802bp|location=Sequence derived from alignment at ACJE01000021.1:1245641..1247352- (Aspergillus niger ATCC 1015)
TCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCAG
CCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGACCGTGA
CTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATCATTGAGACCCACG
TTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGCC
AGCGAGGCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGAAGCCCA
CACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACTAGTGCCCGTGTGT
GCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGTG
CTCTTCTACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAAGCTTGA
AAAATAGATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGCA
ATGCTACGGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGAC
AGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGGA
GGCAGAGGCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAGA
TCCCGGATTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTGC
TATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCTT
CTGGCTCGCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAGA
CCGTCCCTTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCATC
GTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCGG
CCACCAGGCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGGA
TCTGCCATTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCAC
GGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCGT
GCCCAAGACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCACG
AACTCAATGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCTC
CTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCAC
CGGTCACAACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAGC
AGAACGGCTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCTG
TACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTGC
CATTGTCGGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATGA
ACCTTCTGGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCTG
GTCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCA
GCCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGACCGTG
ACTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATCATTGAGACCCAC
GTTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGC
CAGCGAGGCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGAAGCCC
ACACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACTAGTGCCCGTGTG
TGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGT
GCTCTTCTACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAAGCTTG
AAAAATAGATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGC
AATGCTACGGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGA
CAGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGG
AGGCAGAGGCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAG
ATCCCGGATTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTG
CTATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCT
TCTGGCTCGCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAG
ACCGTCCCTTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCAT
CGTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCG
GCCACCAGGCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGG
ATCTGCCATTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCA
CGGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCG
TGCCCAAGACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCAC
GAACTCAATGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCT
CCTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCA
CCGGTCACAACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAG
CAGAACGGCTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCT
GTACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTG
CCATTGTCGGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATG
AACCTTCTGGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCT
GG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FAH12ASPNIDRAFT_208078Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208078-T1ASPNIDRAFT_208078-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208078-T1.cdsASPNIDRAFT_208078-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208078-T1.utr3p1ASPNIDRAFT_208078-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208078-T1.exon3ASPNIDRAFT_208078-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208078-T1.exon2ASPNIDRAFT_208078-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208078-T1.exon1ASPNIDRAFT_208078-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208078-T1.utr5p2ASPNIDRAFT_208078-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_208078-T1.utr5p1ASPNIDRAFT_208078-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR005804
DBxrefPFAM:PF00487
ProductOleate hydroxylase fah12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1245641..1247352 -
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