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ASPNIDRAFT_208129-T1, ASPNIDRAFT_208129-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_208129-T1
Unique NameASPNIDRAFT_208129-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1069973..1070959+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_208129-T1 ID=ASPNIDRAFT_208129-T1|Name=ASPNIDRAFT_208129-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=987bp|location=Sequence derived from alignment at ACJE01000021.1:1069973..1070959+ (Aspergillus niger ATCC 1015)
ATGTCTTTCGCCGCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTC
GCAGAAGCTCCCCCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCC
CGCGGGGAAGTGTCCGGAGCTTCTCCCAGAGCCCACTTTGTGAGCAACCC
CCTTGATCTCAGTCGCATGAGGGCATTCGGACCTCCTATATTCAATGCAA
AGCTAATGGTTGACCCCCGACAGCTCAATTGAAGAAGTACACCGAGTCGC
ACGAGTGGATCGAGCTCGCCGCCGACGGCAAGACTGGTTCGTCTACCACA
GCCCTTTCCCGGCCAAACAACACTCAATTAATTACTAACGCTTTCTTCTA
TCTCTGCAGCCAAGATCGGCATTACTGAATACGCTGCCAAGTCCCTTGGT
GACGTTGTGTTCGTTGAGCTCCCCGAGGTTAATCTGGAGGTTAGCGCCGG
TGAGCCCGTCGGTGCTGTTGAGTCCGTCAAGTCCGCTTCGGACGTCCTTT
CTCCTGTCTCGGGAACTGTTACGCAGGGCAATACTGTGCTGGATGACAAT
GCCAAGTTCATCAACCAGAGCCCCGAGGGTGACGCCTGGATTGCGGAGAT
CGAGGTGAACGATGTCGCGGAGTTGGACGCACTTTTGGACGAGGCTGCTT
ACAAGGCTACTATCGATGAGGAGTAAGCGTGATATGTGTGTGAGTGCGTG
TTTGAGTCATGAAGTATTTGGATGGATGGATGGATCAAAGCCTGGGTTTG
GGATTATATGCGCGCCGCGCTTCTGTGCCTGGCGTCGAATTTATTATGAT
TGTTAAGTCATTTGAACTGTTTTCTTTTGTCTTGGGTTTCATTGGGTGTG
ATTGCTGTGTGTGGATGGTTATGTTTTCACCACATAATGACTGTCTAGAG
AGCTGGCTACGTCATGCCGCTATCGGCGGGCCCTTTTATTCAACAGGAGG
CTGTCTGCGGTTATAAGAATATACAATATTACTATTA
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Coding sequence (CDS) from alignment at ACJE01000021.1:1069973..1070959+

>ASPNIDRAFT_208129-T1 ID=ASPNIDRAFT_208129-T1|Name=ASPNIDRAFT_208129-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1557bp|location=Sequence derived from alignment at ACJE01000021.1:1069973..1070959+ (Aspergillus niger ATCC 1015)
ATGTCTTTCGCCGCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTC
GCAGAAGCTCCCCCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCC
CGCGGGGAAGTGTCCGGAGCTTCTCCCAGAGCCCACTTTCTCAATTGAAG
AAGTACACCGAGTCGCACGAGTGGATCGAGCTCGCCGCCGACGGCAAGAC
TGCCAAGATCGGCATTACTGAATACGCTGCCAAGTCCCTTGGTGACGTTG
TGTTCGTTGAGCTCCCCGAGGTTAATCTGGAGGTTAGCGCCGGTGAGCCC
GTCGGTGCTGTTGAGTCCGTCAAGTCCGCTTCGGACGTCCTTTCTCCTGT
CTCGGGAACTGTTACGCAGGGCAATACTGTGCTGGATGACAATGCCAAGT
TCATCAACCAGAGCCCCGAGGGTGACGCCTGGATTGCGGAGATCGAGGTG
AACGATGTCGCGGAGTTGGACGCACTTTTGGACGAGGCTGCTTACAAGGC
TACTATCGATGAGGAGTAAATGTCTTTCGCCGCCCGATCCCTCCGCCCCT
TCGCTTCTCGCGTCCTGTCGCAGAAGCTCCCCCTCTCTTCCGTCTGCAGG
GCCGCACCCGCCAGTTTCCCGCGGGGAAGTGTCCGGAGCTTCTCCCAGAG
CCCACTTTCTCAATTGAAGAAGTACACCGAGTCGCACGAGTGGATCGAGC
TCGCCGCCGACGGCAAGACTGCCAAGATCGGCATTACTGAATACGCTGCC
AAGTCCCTTGGTGACGTTGTGTTCGTTGAGCTCCCCGAGGTTAATCTGGA
GGTTAGCGCCGGTGAGCCCGTCGGTGCTGTTGAGTCCGTCAAGTCCGCTT
CGGACGTCCTTTCTCCTGTCTCGGGAACTGTTACGCAGGGCAATACTGTG
CTGGATGACAATGCCAAGTTCATCAACCAGAGCCCCGAGGGTGACGCCTG
GATTGCGGAGATCGAGGTGAACGATGTCGCGGAGTTGGACGCACTTTTGG
ACGAGGCTGCTTACAAGGCTACTATCGATGAGGAGTAAATGTCTTTCGCC
GCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTCGCAGAAGCTCCC
CCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCCCGCGGGGAAGTG
TCCGGAGCTTCTCCCAGAGCCCACTTTCTCAATTGAAGAAGTACACCGAG
TCGCACGAGTGGATCGAGCTCGCCGCCGACGGCAAGACTGCCAAGATCGG
CATTACTGAATACGCTGCCAAGTCCCTTGGTGACGTTGTGTTCGTTGAGC
TCCCCGAGGTTAATCTGGAGGTTAGCGCCGGTGAGCCCGTCGGTGCTGTT
GAGTCCGTCAAGTCCGCTTCGGACGTCCTTTCTCCTGTCTCGGGAACTGT
TACGCAGGGCAATACTGTGCTGGATGACAATGCCAAGTTCATCAACCAGA
GCCCCGAGGGTGACGCCTGGATTGCGGAGATCGAGGTGAACGATGTCGCG
GAGTTGGACGCACTTTTGGACGAGGCTGCTTACAAGGCTACTATCGATGA
GGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005960glycine cleavage complex
Vocabulary: Biological Process
TermDefinition
GO:0019464glycine decarboxylation via glycine cleavage system
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208129ASPNIDRAFT_208129Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208129-T1.exon1ASPNIDRAFT_208129-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208129-T1.exon2ASPNIDRAFT_208129-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208129-T1.exon3ASPNIDRAFT_208129-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208129-T1.cdsASPNIDRAFT_208129-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208129-T1.utr3p1ASPNIDRAFT_208129-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208129-T1ASPNIDRAFT_208129-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264SUZ
DBxrefInterPro:IPR011053
DBxrefInterPro:IPR000089
DBxrefInterPro:IPR002930
DBxrefInterPro:IPR003016
DBxrefInterPro:IPR017453
DBxrefInterPro:IPR033753
DBxrefPFAM:PF01597
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1069973..1070959 +
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