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ASPNIDRAFT_208272-T1, ASPNIDRAFT_208272-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_208272-T1
Unique NameASPNIDRAFT_208272-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:689828..690447+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_208272-T1 ID=ASPNIDRAFT_208272-T1|Name=ASPNIDRAFT_208272-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=620bp|location=Sequence derived from alignment at ACJE01000021.1:689828..690447+ (Aspergillus niger ATCC 1015)
CTTCTCCCAGTCGTTTCTCACGTCCACCAGCTTCTCCTTCTCGTCCGTCT
CTCTGCCGGTGTTCTAGCGCGTAGTTCCGATCTTCCCAAGCGGCAAACAG
GTGAGCCACTCAAACACCGCAGCAGTGACGAACGACTTGCGACGGGAAGT
CCATGAAAGCTGACAACTCGCCCCCGCTCCAGTTTTCAGTCTCATCGTTT
CCATTCCTTCTACAACAATGGCCGACTCCGGAGAGGCTCCCGCGGCTGTC
GAGCACCTCAACATCAAGGTTACCGATAACAACAACGAAGTGTTCTTCAA
GATCAAGCGCACAACCCAGTTGAAGAAGTTGATGGACGCGTTCTGCGAAA
GGCAAGGAAAGCAGCCTTCGACGGTTCGGTTCCTGTTTGATGGCACCCGC
GTGCGCCCTGAAGATACGCCCGATACTGTATGTTCTGCACAACGACCCTT
CCGTGATATATTACGTGCACGCACCGCGGCACCCTTCCCCGCACGAACCC
CTGCTCCTCTGGCAGAAGCCAGGGAACCACAAAGAACACGGCTAACATAT
CCAAAACTCGCAGCTCGAGATGGCCGATGGGGACACTCTCGAAGTGCACC
AGGAACAAATCGGTGGCTAG
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Coding sequence (CDS) from alignment at ACJE01000021.1:689828..690447+

>ASPNIDRAFT_208272-T1 ID=ASPNIDRAFT_208272-T1|Name=ASPNIDRAFT_208272-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=534bp|location=Sequence derived from alignment at ACJE01000021.1:689828..690447+ (Aspergillus niger ATCC 1015)
ATGGCCGACTCCGGAGAGGCTCCCGCGGCTGTCGAGCACCTCAACATCAA
GGTTACCGATAACAACAACGAAGTGTTCTTCAAGATCAAGCGCACAACCC
AGTTGAAGAAGTTGATGGACGCGTTCTGCGAAAGGCAAGGAAAGCAGCCT
TCGACGGTTCGGTTCCTGTTTGATGGCACCCGCGTGCGCCCTGAAGATAC
GCCCGATACTCTCGAGATGGCCGATGGGGACACTCTCGAAGTGCACCAGG
AACAAATCGGTGGCTAGATGGCCGACTCCGGAGAGGCTCCCGCGGCTGTC
GAGCACCTCAACATCAAGGTTACCGATAACAACAACGAAGTGTTCTTCAA
GATCAAGCGCACAACCCAGTTGAAGAAGTTGATGGACGCGTTCTGCGAAA
GGCAAGGAAAGCAGCCTTCGACGGTTCGGTTCCTGTTTGATGGCACCCGC
GTGCGCCCTGAAGATACGCCCGATACTCTCGAGATGGCCGATGGGGACAC
TCTCGAAGTGCACCAGGAACAAATCGGTGGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208272ASPNIDRAFT_208272Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208272-T1ASPNIDRAFT_208272-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208272-T1.utr5p1ASPNIDRAFT_208272-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_208272-T1.utr5p2ASPNIDRAFT_208272-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208272-T1.exon1ASPNIDRAFT_208272-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208272-T1.exon2ASPNIDRAFT_208272-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208272-T1.exon3ASPNIDRAFT_208272-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208272-T1.cdsASPNIDRAFT_208272-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR022617
DBxrefInterPro:IPR000626
DBxrefPFAM:PF00240
DBxrefPFAM:PF11976
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:689828..690447 +
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