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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:398562..399871+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_208354-T1 ID=ASPNIDRAFT_208354-T1|Name=ASPNIDRAFT_208354-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1310bp|location=Sequence derived from alignment at ACJE01000021.1:398562..399871+ (Aspergillus niger ATCC 1015)
ATGGCGGAGTAAGTCTTCCTGGCCCTATCAGTCTCATCTAGGGGTCTGCA
TGCTAATGCTCGCTATAGGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCG
AGGCCTTGGTATGCACACCATGAAAATCTCCCCCCCACCCGCCTTTTTCA
CGGCCGGCGACGATACTTACAGCGTGGCATATAGGTGGTGATGAAGATCA
TCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTC
GGTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCC
CGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATACCGCTCCCAACC
CGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGCTGAG
ATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTG
GTACACTAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGA
ACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTG
CACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCG
CCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCG
AGGAGTACGTTCATAATACTATTGCCCCGGAGGGATGATAGACGCATGCT
AATTGGTTGTTTTTGGCAGGCTCCAAAAGTCCAACCTCAGGTACCAGGAC
ATCCTGGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTC
CTTCATTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCC
CCCCGTCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTG
CTGGCACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGA
GAAGAACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGA
CCAACAACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAG
ATCACCGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGC
TCTCAAGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGC
TGCCCCAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTT
GAGCAGTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAA
GATGTTTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAGA
TGGTGAGGAG back to topCoding sequence (CDS) from alignment at ACJE01000021.1:398562..399871+ >ASPNIDRAFT_208354-T1 ID=ASPNIDRAFT_208354-T1|Name=ASPNIDRAFT_208354-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2088bp|location=Sequence derived from alignment at ACJE01000021.1:398562..399871+ (Aspergillus niger ATCC 1015)
ATGAAGATCATCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGG
TTCGATCGTCGGTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTT
TCCCTTTCCCCGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATACC
GCTCCCAACCCGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTA
CGAGGCTGAGATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACA
ACGTTGGTTGGTACACTAGCGCCAACATGGGCAACTTCATCAACATGAAC
GTGATCGAGAACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGT
CGCTCTGGTGCACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGC
GCGCTTTCCGCCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAG
TTCACTTCCGAGGAGCTCCAAAAGTCCAACCTCAGGTACCAGGACATCCT
GGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTCCTTCA
TTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCCCCCCG
TCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCTGGC
ACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGAGAAGA
ACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGACCAAC
AACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGATCAC
CGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCTCTCA
AGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTGCCC
CAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTTGAGCA
GTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAAGATGT
TTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAGATGAAG
ATCATCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGAT
CGTCGGTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTT
TCCCCGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATACCGCTCCC
AACCCGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGC
TGAGATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTG
GTTGGTACACTAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATC
GAGAACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCT
GGTGCACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTT
TCCGCCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACT
TCCGAGGAGCTCCAAAAGTCCAACCTCAGGTACCAGGACATCCTGGTCGA
GCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTCCTTCATTCACC
AGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCCCCCCGTCCCTG
GCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCTGGCACCCAA
CTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGAGAAGAACTGCG
ACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGACCAACAACTTC
CAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGATCACCGCGTG
GCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCTCTCAAGCAGC
CCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTGCCCCAGGAG
CCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTTGAGCAGTACGC
TCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAAGATGTTTGCCG
TCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0021886 |
| DBxref | InterPro:IPR027524 |
| DBxref | InterPro:IPR037518 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:398562..399871 + |
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