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ASPNIDRAFT_208428-T1, ASPNIDRAFT_208428-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_208428-T1
Unique NameASPNIDRAFT_208428-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:204970..205942+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_208428-T1 ID=ASPNIDRAFT_208428-T1|Name=ASPNIDRAFT_208428-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=973bp|location=Sequence derived from alignment at ACJE01000021.1:204970..205942+ (Aspergillus niger ATCC 1015)
CAACTGATAGTCATACGTAGCTTAATTTCCCATTTCCGTTTCCATCACCG
TCGCTGTCTGCTGCCCGCCTACTACTATACTTCTCGCCAATCACACTCCC
AAGATCACGCCCACTTGGAATGGGCCTTGAGTACTTGCTTGCTTGCTTCT
TCTAGGATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTCTTCATCCC
CGACAGAGCCCCCGTACGCATCCCCTCATCCCTTATCGCATCCTCGCAGG
TTGACCTGTCTGCTGACTTGTACTCGCTAGGACCTCCCAGCCAAGGTGCG
CACTATTGCTCCATCCCTCTTGATCCTCCTCTCTGTCTTTCAATCCCCCG
TTCTCGATTGACCCGCGCACAGTTCCGGAAACTCCTGACGCCAGGCAAGA
TCGGCCAGATCCTCTGTCTCGGCAATCTCACCGATCGGAGCACTTTCGAA
TTCCTCCGACAGGTCGCTCCAGACTTGCAATTGGTCAAAGGCGACTTCGA
TGTCGATTCCCCCAACCTACCCCTCTCTAAAGTGGTGACTCACGGGAGTC
TCCGCATCGGATTTACTCATGGCCACACCATCATCCCGCCGGGGGACGCC
GATGCCCTTCTGATCGCTGCCCGCCAGATGGATGTTGACATACTGCTATG
GGGTGGAACCCACCGCTTTGAAGCTTTTGAACTGGAGGGAAGGTTCTTTA
TCAACCCGGGAAGTGCCACCGGTGCCATGAGCACGGGGTACTGGCCGGAA
GGGGAAGAGCCGACACCTAGTTTCTGTTTGATGGATGTAAGTCGCGCAAC
TCCACGGGGTTCGCTGCAAGACTCGGTACGTGCTCTATGCTAACACAGGA
TTATAGATCCAAGGCGATGTCCTCGTGTTGTATGTTTACCAACTGAAGAC
GGACGCCGACGGGGCTGAGACGGTCGCGGTCGAGAAAGTATCTTACCGCA
AGAACAATATCCCTTCTTCATGA
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Coding sequence (CDS) from alignment at ACJE01000021.1:204970..205942+

>ASPNIDRAFT_208428-T1 ID=ASPNIDRAFT_208428-T1|Name=ASPNIDRAFT_208428-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2412bp|location=Sequence derived from alignment at ACJE01000021.1:204970..205942+ (Aspergillus niger ATCC 1015)
ATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTCTTCATCCCCGACAG
AGCCCCCGACCTCCCAGCCAAGTTCCGGAAACTCCTGACGCCAGGCAAGA
TCGGCCAGATCCTCTGTCTCGGCAATCTCACCGATCGGAGCACTTTCGAA
TTCCTCCGACAGGTCGCTCCAGACTTGCAATTGGTCAAAGGCGACTTCGA
TGTCGATTCCCCCAACCTACCCCTCTCTAAAGTGGTGACTCACGGGAGTC
TCCGCATCGGATTTACTCATGGCCACACCATCATCCCGCCGGGGGACGCC
GATGCCCTTCTGATCGCTGCCCGCCAGATGGATGTTGACATACTGCTATG
GGGTGGAACCCACCGCTTTGAAGCTTTTGAACTGGAGGGAAGGTTCTTTA
TCAACCCGGGAAGTGCCACCGGTGCCATGAGCACGGGGTACTGGCCGGAA
GGGGAAGAGCCGACACCTAGTTTCTGTTTGATGGATATCCAAGGCGATGT
CCTCGTGTTGTATGTTTACCAACTGAAGACGGACGCCGACGGGGCTGAGA
CGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACAATATCCCTTCTTCA
TGAATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTCTTCATCCCCGA
CAGAGCCCCCGACCTCCCAGCCAAGTTCCGGAAACTCCTGACGCCAGGCA
AGATCGGCCAGATCCTCTGTCTCGGCAATCTCACCGATCGGAGCACTTTC
GAATTCCTCCGACAGGTCGCTCCAGACTTGCAATTGGTCAAAGGCGACTT
CGATGTCGATTCCCCCAACCTACCCCTCTCTAAAGTGGTGACTCACGGGA
GTCTCCGCATCGGATTTACTCATGGCCACACCATCATCCCGCCGGGGGAC
GCCGATGCCCTTCTGATCGCTGCCCGCCAGATGGATGTTGACATACTGCT
ATGGGGTGGAACCCACCGCTTTGAAGCTTTTGAACTGGAGGGAAGGTTCT
TTATCAACCCGGGAAGTGCCACCGGTGCCATGAGCACGGGGTACTGGCCG
GAAGGGGAAGAGCCGACACCTAGTTTCTGTTTGATGGATATCCAAGGCGA
TGTCCTCGTGTTGTATGTTTACCAACTGAAGACGGACGCCGACGGGGCTG
AGACGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACAATATCCCTTCT
TCATGAATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTCTTCATCCC
CGACAGAGCCCCCGACCTCCCAGCCAAGTTCCGGAAACTCCTGACGCCAG
GCAAGATCGGCCAGATCCTCTGTCTCGGCAATCTCACCGATCGGAGCACT
TTCGAATTCCTCCGACAGGTCGCTCCAGACTTGCAATTGGTCAAAGGCGA
CTTCGATGTCGATTCCCCCAACCTACCCCTCTCTAAAGTGGTGACTCACG
GGAGTCTCCGCATCGGATTTACTCATGGCCACACCATCATCCCGCCGGGG
GACGCCGATGCCCTTCTGATCGCTGCCCGCCAGATGGATGTTGACATACT
GCTATGGGGTGGAACCCACCGCTTTGAAGCTTTTGAACTGGAGGGAAGGT
TCTTTATCAACCCGGGAAGTGCCACCGGTGCCATGAGCACGGGGTACTGG
CCGGAAGGGGAAGAGCCGACACCTAGTTTCTGTTTGATGGATATCCAAGG
CGATGTCCTCGTGTTGTATGTTTACCAACTGAAGACGGACGCCGACGGGG
CTGAGACGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACAATATCCCT
TCTTCATGAATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTCTTCAT
CCCCGACAGAGCCCCCGACCTCCCAGCCAAGTTCCGGAAACTCCTGACGC
CAGGCAAGATCGGCCAGATCCTCTGTCTCGGCAATCTCACCGATCGGAGC
ACTTTCGAATTCCTCCGACAGGTCGCTCCAGACTTGCAATTGGTCAAAGG
CGACTTCGATGTCGATTCCCCCAACCTACCCCTCTCTAAAGTGGTGACTC
ACGGGAGTCTCCGCATCGGATTTACTCATGGCCACACCATCATCCCGCCG
GGGGACGCCGATGCCCTTCTGATCGCTGCCCGCCAGATGGATGTTGACAT
ACTGCTATGGGGTGGAACCCACCGCTTTGAAGCTTTTGAACTGGAGGGAA
GGTTCTTTATCAACCCGGGAAGTGCCACCGGTGCCATGAGCACGGGGTAC
TGGCCGGAAGGGGAAGAGCCGACACCTAGTTTCTGTTTGATGGATATCCA
AGGCGATGTCCTCGTGTTGTATGTTTACCAACTGAAGACGGACGCCGACG
GGGCTGAGACGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACAATATC
CCTTCTTCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030904retromer complex
Vocabulary: Biological Process
TermDefinition
GO:0042147retrograde transport, endosome to Golgi
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208428ASPNIDRAFT_208428Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208428-T1ASPNIDRAFT_208428-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208428-T1.utr5p1ASPNIDRAFT_208428-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208428-T1.exon1ASPNIDRAFT_208428-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208428-T1.exon2ASPNIDRAFT_208428-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208428-T1.exon3ASPNIDRAFT_208428-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208428-T1.exon4ASPNIDRAFT_208428-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208428-T1.cdsASPNIDRAFT_208428-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteBUSCO:EOG092640ZF
DBxrefInterPro:IPR028661
DBxrefInterPro:IPR024654
DBxrefInterPro:IPR000979
DBxrefInterPro:IPR029052
DBxrefPFAM:PF12850
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:204970..205942 +
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