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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000019.1:1227070..1228227- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_208805-T1 ID=ASPNIDRAFT_208805-T1|Name=ASPNIDRAFT_208805-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1158bp|location=Sequence derived from alignment at ACJE01000019.1:1227070..1228227- (Aspergillus niger ATCC 1015)
CATCTCTCTCCATCCTGCTATAGCTTCCTGCTCTTCCCCCGTCATCTGTT
TTCGGCATTTCATCTTCCCTCCTCAAGCTTCAGCTCCTCCTCATTCCAAC
TGAGTTTCAATTCTCCCAGCTCACACTGGTTTCCTGCCCCCTCACAATAC
ATCACCTTTCCACGCCGTCACCATGACAGGCTTCGATTTCTCCAACTACA
ACCGTAACGCGGCTCTCCACGCGAAGGGAGTCCCTCTTCCCAAAGCCACC
AGCACCGGTACCACCATCGTGGGATGTATATACGACAATGGCGTTGTGGT
AGGTACCTCCGGAGCAACCCAACAAGCTCCCTAGTACCCAAGACGACGAT
CACGAACTCACCACATCTGGCATAACCACAGATTGCAGCAGATACCAGAG
CCACCAGCGGCCCGATAGTAGCAGACAAGGTAAGCACCGCTTTTCCCAGG
ACATTCACACCTATCTCCAATAACCCAACTCAACAACTAACACACTACCC
CCCACACCTCCAGAACTGCGAGAAACTACACTACATCGCGCCCAAGATCT
GGTGCGCCGGAGCCGGAACGGCCGCCGACACCGAGTTCACGACGGCGTTG
ATCAGCTCGAACATCGAACTGCACGCACTTTCGACGGGCCGGCCCCCACG
CGTAATCACCTGCATGACGATGCTGAAGCAGCACCTATTCCGATACCAAG
GCCACATCGGCGCCTACCTGGTTGTGGCGGGTGTCGATCCCACCGGCATT
GGTCTTTTCACCGTCCACGCCCACGGATCCACCGACAAGCTTCCCTACGT
GACCATGGGATCAGGTTCTCTGGCCGCGATGTCGGTGTTCGAGTCGACAT
GGAAGCCGAATCTGGACCGTGAGGGCGCGATCGCCCTGTGCGCGGAGGCC
ATCAAGGCCGGTATCTTCAACGATCTGGGATCCGGTAGCAATGTCGATGT
TTGCGTCATTGAGAAGGACAAGCCTACGCAGTTGCTGCGGAACTACATCA
GGCCTAATGAGCGTGGCGAGAAGGAGCGCAATTACCGCTTCCCCAAGGGT
ACTACGGCTTATTTGAACCAGAAGATCATCAGCAAGGAGGATATGCGGAA
GTATATCTCTGTTGAGGAGGCGTCTGGTGATCCTAATTTGATGGAGGTGG
ATGTCTAA back to topCoding sequence (CDS) from alignment at ACJE01000019.1:1227070..1228227- >ASPNIDRAFT_208805-T1 ID=ASPNIDRAFT_208805-T1|Name=ASPNIDRAFT_208805-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2457bp|location=Sequence derived from alignment at ACJE01000019.1:1227070..1228227- (Aspergillus niger ATCC 1015)
AACTGCGAGAAACTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGC
CGGAACGGCCGCCGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACA
TCGAACTGCACGCACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGC
ATGACGATGCTGAAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGC
CTACCTGGTTGTGGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCG
TCCACGCCCACGGATCCACCGACAAGCTTCCCTACGTGACCATGGGATCA
GGTTCTCTGGCCGCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCT
GGACCGTGAGGGCGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTA
TCTTCAACGATCTGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAG
AAGGACAAGCCTACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCG
TGGCGAGAAGGAGCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATT
TGAACCAGAAGATCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTT
GAGGAGGCGTCTGGTGATCCTAATTTGATGGAGGTGGATGTCTAAATTGC
AGCAGATACCAGAGCCACCAGCGGCCCGATAGTAGCAGACAAGATGACAG
GCTTCGATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGCGAAGGGA
GTCCCTCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGGGATGTAT
ATACGACAATGGCGTTGTGAACTGCGAGAAACTACACTACATCGCGCCCA
AGATCTGGTGCGCCGGAGCCGGAACGGCCGCCGACACCGAGTTCACGACG
GCGTTGATCAGCTCGAACATCGAACTGCACGCACTTTCGACGGGCCGGCC
CCCACGCGTAATCACCTGCATGACGATGCTGAAGCAGCACCTATTCCGAT
ACCAAGGCCACATCGGCGCCTACCTGGTTGTGGCGGGTGTCGATCCCACC
GGCATTGGTCTTTTCACCGTCCACGCCCACGGATCCACCGACAAGCTTCC
CTACGTGACCATGGGATCAGGTTCTCTGGCCGCGATGTCGGTGTTCGAGT
CGACATGGAAGCCGAATCTGGACCGTGAGGGCGCGATCGCCCTGTGCGCG
GAGGCCATCAAGGCCGGTATCTTCAACGATCTGGGATCCGGTAGCAATGT
CGATGTTTGCGTCATTGAGAAGGACAAGCCTACGCAGTTGCTGCGGAACT
ACATCAGGCCTAATGAGCGTGGCGAGAAGGAGCGCAATTACCGCTTCCCC
AAGGGTACTACGGCTTATTTGAACCAGAAGATCATCAGCAAGGAGGATAT
GCGGAAGTATATCTCTGTTGAGGAGGCGTCTGGTGATCCTAATTTGATGG
AGGTGGATGTCTAAATTGCAGCAGATACCAGAGCCACCAGCGGCCCGATA
GTAGCAGACAAGATGACAGGCTTCGATTTCTCCAACTACAACCGTAACGC
GGCTCTCCACGCGAAGGGAGTCCCTCTTCCCAAAGCCACCAGCACCGGTA
CCACCATCGTGGGATGTATATACGACAATGGCGTTGTGAACTGCGAGAAA
CTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGCCGGAACGGCCGC
CGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACATCGAACTGCACG
CACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGCATGACGATGCTG
AAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGCCTACCTGGTTGT
GGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCGTCCACGCCCACG
GATCCACCGACAAGCTTCCCTACGTGACCATGGGATCAGGTTCTCTGGCC
GCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCTGGACCGTGAGGG
CGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTATCTTCAACGATC
TGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAGAAGGACAAGCCT
ACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCGTGGCGAGAAGGA
GCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATTTGAACCAGAAGA
TCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTTGAGGAGGCGTCT
GGTGATCCTAATTTGATGGAGGTGGATGTCTAAATTGCAGCAGATACCAG
AGCCACCAGCGGCCCGATAGTAGCAGACAAGATGACAGGCTTCGATTTCT
CCAACTACAACCGTAACGCGGCTCTCCACGCGAAGGGAGTCCCTCTTCCC
AAAGCCACCAGCACCGGTACCACCATCGTGGGATGTATATACGACAATGG
CGTTGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005839 | proteasome core complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051603 | proteolysis involved in cellular protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004298 | threonine-type endopeptidase activity |
| GO:0004175 | endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092641M3 |
| Note | MEROPS:MER0000542 |
| DBxref | InterPro:IPR023333 |
| DBxref | InterPro:IPR024689 |
| DBxref | InterPro:IPR001353 |
| DBxref | InterPro:IPR029055 |
| DBxref | InterPro:IPR000243 |
| DBxref | PFAM:PF12465 |
| DBxref | PFAM:PF00227 |
| Product | proteasome core particle subunit beta 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000019.1 | supercontig | ACJE01000019.1:1227070..1228227 - |
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