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ASPNIDRAFT_209213-T1, ASPNIDRAFT_209213-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_209213-T1
Unique NameASPNIDRAFT_209213-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2794058..2794999+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_209213-T1 ID=ASPNIDRAFT_209213-T1|Name=ASPNIDRAFT_209213-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=942bp|location=Sequence derived from alignment at ACJE01000019.1:2794058..2794999+ (Aspergillus niger ATCC 1015)
CTCTGTCGACGCCAACGCAACCACCGTATCCTATACCCTTATCACAACTT
TCTTCACCTTTCACACCTAATCTCAAAATCTTTCAATATGCCTCCCAAAG
CCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAG
GCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTC
CGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTT
ACATCTACAAGGGTGAGTAATCTTAAGACTTGTATTCCTAGTCAATAGTT
GTTGACTGTGTTATAGTCTTGAAGCAGGTCCACCCTGATACCGGTATCTC
GACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGGTATGTCGTGAA
TGAAGCAGGGTTATACCTTCAGCAAGCACCTAACGCGGTCTAGATATCTT
CGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACAAGAAGT
CCACCATCTCTTCACGGGAGATCCAGACCTCGTAAGTCCTCTGTCGATCA
AGATAGTAGCAATTCGCTAACACCTCTCTAGTGTGAGGCTCATCCTTCCC
GGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGTCACGAA
GTACTCGTCGTCTGCCAAATAAGCATTTTCTTTCCTTTTTTCTTTCTGCA
GGATTGTTCTTTTGCTACCTCGTCATCTGTTACGGTTTTGAGGTGGTGGG
TTACAGGGTGTTCGCGGGATTCTAATGTGTCATGGGATGGCTTTATTTCT
TTTTTTCCCCTTGGGCCAAATGTTTTATGGTTGTTTTTTTTTGTGACGTG
AATGCGGTGTAACATAACTCGGATGTGGGGTTGGTTGCGCGGGTTTACCT
TCCCCAGCAGAATTCGAATATCAAATTGCCTAGTTGCATGTC
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Coding sequence (CDS) from alignment at ACJE01000019.1:2794058..2794999+

>ASPNIDRAFT_209213-T1 ID=ASPNIDRAFT_209213-T1|Name=ASPNIDRAFT_209213-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1704bp|location=Sequence derived from alignment at ACJE01000019.1:2794058..2794999+ (Aspergillus niger ATCC 1015)
ATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCCCC
GGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGACTG
CTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAG
ACCTACTCGTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCTGATAC
CGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGATA
TCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACAAG
AAGTCCACCATCTCTTCACGGGAGATCCAGACCTCTGTGAGGCTCATCCT
TCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGTCA
CGAAGTACTCGTCGTCTGCCAAATAAATGCCTCCCAAAGCCGCTGAGAAG
AAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAGGCTCCCGCTGA
GAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTCCGGCGACAAGA
AGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACAAG
GTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCGACTCGTGCTATGTC
CATCCTGAACTCCTTTGTCAATGATATCTTCGAGCGTGTCGCGACCGAGG
CCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCACGGGAG
ATCCAGACCTCTGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCACGC
GGTGTCGGAAGGCACCAAGGCTGTCACGAAGTACTCGTCGTCTGCCAAAT
AAATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCC
CCGGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGAC
TGCTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGG
AGACCTACTCGTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCTGAT
ACCGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGA
TATCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACA
AGAAGTCCACCATCTCTTCACGGGAGATCCAGACCTCTGTGAGGCTCATC
CTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGT
CACGAAGTACTCGTCGTCTGCCAAATAAATGCCTCCCAAAGCCGCTGAGA
AGAAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAGGCTCCCGCT
GAGAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTCCGGCGACAA
GAAGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACA
AGGTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCGACTCGTGCTATG
TCCATCCTGAACTCCTTTGTCAATGATATCTTCGAGCGTGTCGCGACCGA
GGCCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCACGGG
AGATCCAGACCTCTGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCAC
GCGGTGTCGGAAGGCACCAAGGCTGTCACGAAGTACTCGTCGTCTGCCAA
ATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTB1ASPNIDRAFT_209213Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209213-T1ASPNIDRAFT_209213-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209213-T1.utr5p1ASPNIDRAFT_209213-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209213-T1.exon1ASPNIDRAFT_209213-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209213-T1.exon2ASPNIDRAFT_209213-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209213-T1.exon3ASPNIDRAFT_209213-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209213-T1.exon4ASPNIDRAFT_209213-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209213-T1.cdsASPNIDRAFT_209213-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209213-T1.utr3p1ASPNIDRAFT_209213-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR007125
DBxrefInterPro:IPR000558
DBxrefPFAM:PF00125
Producthistone H2B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2794058..2794999 +
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