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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:2358868..2360003- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_209252-T1 ID=ASPNIDRAFT_209252-T1|Name=ASPNIDRAFT_209252-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1136bp|location=Sequence derived from alignment at ACJE01000009.1:2358868..2360003- (Aspergillus niger ATCC 1015)
ATGACGCGGGGCTGTCGCCTTCAACTCTCTCTACAACTGCCATCCTGCTC
ACCTTTTGTCATCATCCATCTATCTCTCTATCTCTCCATCCATCCATCCT
CCATCCATCGTCCATCTCAACCTTTTGTCTGTTATCTCTTAGCTTCCATC
TAGTCTCTGTTACCCTTTTTACTCCTCTTCGTCTATTTCGTCACTTATCT
CCCCCCTTAAGGGACCCGTCGGACCAGACCTACTAGCCGCCCTCATCTAC
TTATCAAAATGCGTTCCAAGTTTAAGGACGAGCACCCCTTCGAGAAGCGC
AAGGCAGAGGCCGAGCGTATCCGTCAGAAATATGCCGATCGCATTCCAGT
ACGTCTATCCTTTGTTTTATTTTCTACTGTGATCTTGATTTCACGGTCTT
TTGGGGGAAGGAACGGGTCTCTAGCTCACCGCTTGTTCGAGTCGCTAACC
CGGCTCCTATCCTACAGGTAATCTGCGAAAAGGTCGAGAAATCGGACATC
GCTACCATCGACAAGAAGAAATATCTTGTCCCTGCCGACCTTACCGTTGG
GCAGTTCGTCTACGTGATCCGTAAGCGGATTAAGCTGTCCCCCGAGAAGG
CGATCTTTATCTTTGTCGACGAGGTTTTGCCGCCTACGGCCGCTCTCATG
AGCAGTATCTACGAAGAGCACAAGGATGAAGATGGCTTCTTGTATATCAC
GTATGCCGATCCCTCTGATTTCCTACTACCACTGTTCTGTGTGCATAGTG
CTAACTCGGATCTTCTCTTTATCAGGTACTCCGGCGAGAATACGTTTGGT
GACTGCTAGGCGCTGGTCGATCTCCTCGTTTCACTCTTTCTTTTTCCCTG
CTTCTTGAAGTGAATTCGCTGCCGTCATCGTTTCAAGTCACTTCCTTCAG
TTGCCCTTTCCTTAATTTGGGGAAGTTGCAGATGAACTTCCTAGATGTGG
GTGTTGGTTGCTGTAGGACCTGGATAGATGGCGAGCTCGACCACGCTGTG
ATGTTTCTATGCTGTGCTGTACCCGCGGGCGTTATCTTGGGGGCTCTTCA
TTAATCTTCGTGTGAACTCTCTTGGCGAAATGAGTATTCTTCAGATGATA
GTTTAAATGAGAAACAATCGTTGGCATTTGCTGGAA back to topCoding sequence (CDS) from alignment at ACJE01000009.1:2358868..2360003- >ASPNIDRAFT_209252-T1 ID=ASPNIDRAFT_209252-T1|Name=ASPNIDRAFT_209252-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1071bp|location=Sequence derived from alignment at ACJE01000009.1:2358868..2360003- (Aspergillus niger ATCC 1015)
GTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGCGAAAAGG
TCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCTTGTCCCT
GCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGCGGATTAA
GCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTTTTGCCGC
CTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGATGAAGAT
GGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCACCCCTTC
GAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATGCCGATCG
CATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGC
GAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCT
TGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGC
GGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTT
TTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGA
TGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCA
CCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATG
CCGATCGCATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGT
AATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGA
AATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATC
CGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGA
CGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGC
ACAAGGATGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGG
ACGAGCACCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAG
AAATATGCCGATCGCATTCCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265BTA |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR004241 |
| DBxref | PFAM:PF02991 |
| DBxref | PFAM:PF04110 |
| Product | ubiquitin-like protein atg8 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:2358868..2360003 - |
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