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ASPNIDRAFT_209386-T1, ASPNIDRAFT_209386-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_209386-T1
Unique NameASPNIDRAFT_209386-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:2020928..2022178-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_209386-T1 ID=ASPNIDRAFT_209386-T1|Name=ASPNIDRAFT_209386-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1251bp|location=Sequence derived from alignment at ACJE01000009.1:2020928..2022178- (Aspergillus niger ATCC 1015)
CGCAGGCCCCGACACCCACCCTCCGCGACGAATTATACCACCCAGCTCGA
CTTCGCTTCCTCGTCGGACTGAATTCTCGCAACAATGGCGACCGAGTTGA
CCGTCCAGTCGGAACGTGCGTTCCAGAAGCAGCCTCACATCTTCGTCAAC
CCCAAGGCTCAGGCGAAGAGCAAGAAGGTTGGCACCGGCCGCCGTTGGTA
CAAGGATGTCGGTCTGGGTTTCCGTACCCCCAAGACCGCCATTGAGGGCT
CCTACATCGGTATGCACGACCTATGTTGAAATTTTATTTGCGGCGTTATC
GACTTCCGATCATGCGGGACCAAGACTGGGAATCTTTTGGAGGCTATGGC
GAGATGAGAATATGCCGCATGGAGAAGAGAGAAATCACCTGGAAAGCGCC
AGCATGAGTCTACGATAAAATGCAACTATCTTCTGCAAAGGATCGGGATG
GAATGCGACAAGAGAAGGAATCAAAGATCAGACCTGGAAAAAGCGCTTGG
CGACAGATTTGCGGAACCCGGTTATTCTCATCTCTCAAAGGCTCCGGAGA
AGTCCAGTCATGTCGTTTGAAATCTCCAGGTGGGACATATCACTGATATC
GAACAGACAAGAAGTGCCCCTTCACCGGTCTGGTTTCCATCCGTGGCCGT
ATCCTGACCGGCCGTGTCGTCTCCACCAAGATGCACCGTACCATCGTCAT
CCGCCGTGAATACCTCCACTACGTCCCCAAGTACAACCGTTACGAGAAGA
GACACAAGAACCTTGCCGCTCACGTCTCTCCCGCTTTCCGTGTTGAGGAA
GGTGACTGGGTCACCGTCGGCCAGTGCCGCCCCCTGAGCAAGACTGTACG
TCAAACTTTCCTCGGGATATCTTCTATGGTTACTGGTGGCAAATGCATTC
CTTTCCTATACGCCTGAAAGGATATGGATGATGTCCAGCGCTATCGAAGA
TATTCTACATGGATCGCAAAAATATATACGTCAGATGCGCTAACTTACTA
TTCAGGTCCGCTTCAACGTCCTCCGTGTCCTGCCCCGTACCGGCAAGGCC
GTCAAGGCTTTCTCCAAGTTCTAAGCGTCTCGATGAGGAAGGGTGTGTTT
TCGCGAGGACGAACCTAGGGCAGCGGCGTGACTGGATATAAACGGAATAG
TTTCTAGGGTTGGGATTGTTTCACGATTTCATGTCCCAGGTACCCTTGTG
GAAGGAATATCCAATGAAAAAATTACTTTGATTCTCCCACATAGACTTTT
T
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Coding sequence (CDS) from alignment at ACJE01000009.1:2020928..2022178-

>ASPNIDRAFT_209386-T1 ID=ASPNIDRAFT_209386-T1|Name=ASPNIDRAFT_209386-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1449bp|location=Sequence derived from alignment at ACJE01000009.1:2020928..2022178- (Aspergillus niger ATCC 1015)
GTCCGCTTCAACGTCCTCCGTGTCCTGCCCCGTACCGGCAAGGCCGTCAA
GGCTTTCTCCAAGTTCTAAACAAGAAGTGCCCCTTCACCGGTCTGGTTTC
CATCCGTGGCCGTATCCTGACCGGCCGTGTCGTCTCCACCAAGATGCACC
GTACCATCGTCATCCGCCGTGAATACCTCCACTACGTCCCCAAGTACAAC
CGTTACGAGAAGAGACACAAGAACCTTGCCGCTCACGTCTCTCCCGCTTT
CCGTGTTGAGGAAGGTGACTGGGTCACCGTCGGCCAGTGCCGCCCCCTGA
GCAAGACTATGGCGACCGAGTTGACCGTCCAGTCGGAACGTGCGTTCCAG
AAGCAGCCTCACATCTTCGTCAACCCCAAGGCTCAGGCGAAGAGCAAGAA
GGTTGGCACCGGCCGCCGTTGGTACAAGGATGTCGGTCTGGGTTTCCGTA
CCCCCAAGACCGCCATTGAGGGCTCCTACATCGGTCCGCTTCAACGTCCT
CCGTGTCCTGCCCCGTACCGGCAAGGCCGTCAAGGCTTTCTCCAAGTTCT
AAACAAGAAGTGCCCCTTCACCGGTCTGGTTTCCATCCGTGGCCGTATCC
TGACCGGCCGTGTCGTCTCCACCAAGATGCACCGTACCATCGTCATCCGC
CGTGAATACCTCCACTACGTCCCCAAGTACAACCGTTACGAGAAGAGACA
CAAGAACCTTGCCGCTCACGTCTCTCCCGCTTTCCGTGTTGAGGAAGGTG
ACTGGGTCACCGTCGGCCAGTGCCGCCCCCTGAGCAAGACTATGGCGACC
GAGTTGACCGTCCAGTCGGAACGTGCGTTCCAGAAGCAGCCTCACATCTT
CGTCAACCCCAAGGCTCAGGCGAAGAGCAAGAAGGTTGGCACCGGCCGCC
GTTGGTACAAGGATGTCGGTCTGGGTTTCCGTACCCCCAAGACCGCCATT
GAGGGCTCCTACATCGGTCCGCTTCAACGTCCTCCGTGTCCTGCCCCGTA
CCGGCAAGGCCGTCAAGGCTTTCTCCAAGTTCTAAACAAGAAGTGCCCCT
TCACCGGTCTGGTTTCCATCCGTGGCCGTATCCTGACCGGCCGTGTCGTC
TCCACCAAGATGCACCGTACCATCGTCATCCGCCGTGAATACCTCCACTA
CGTCCCCAAGTACAACCGTTACGAGAAGAGACACAAGAACCTTGCCGCTC
ACGTCTCTCCCGCTTTCCGTGTTGAGGAAGGTGACTGGGTCACCGTCGGC
CAGTGCCGCCCCCTGAGCAAGACTATGGCGACCGAGTTGACCGTCCAGTC
GGAACGTGCGTTCCAGAAGCAGCCTCACATCTTCGTCAACCCCAAGGCTC
AGGCGAAGAGCAAGAAGGTTGGCACCGGCCGCCGTTGGTACAAGGATGTC
GGTCTGGGTTTCCGTACCCCCAAGACCGCCATTGAGGGCTCCTACATCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS11AASPNIDRAFT_209386Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209386-T1ASPNIDRAFT_209386-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209386-T1.cdsASPNIDRAFT_209386-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209386-T1.utr3p1ASPNIDRAFT_209386-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209386-T1.exon3ASPNIDRAFT_209386-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209386-T1.exon2ASPNIDRAFT_209386-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209386-T1.exon1ASPNIDRAFT_209386-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209386-T1.utr5p1ASPNIDRAFT_209386-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092653NM
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR019979
DBxrefInterPro:IPR028333
DBxrefInterPro:IPR032440
DBxrefInterPro:IPR000266
DBxrefPFAM:PF16205
DBxrefPFAM:PF00366
Productribosomal 40S subunit protein S11A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:2020928..2022178 -
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