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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:1589556..1591055- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_209528-T1 ID=ASPNIDRAFT_209528-T1|Name=ASPNIDRAFT_209528-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1500bp|location=Sequence derived from alignment at ACJE01000009.1:1589556..1591055- (Aspergillus niger ATCC 1015)
ACCATTCCTCTTTTTACCGACATAATGGACCCTACCGAGTTGCACGATAC
CACCATGGTCGATGAGACCTCCCCCAACAACGTCGACATGATTGACGATG
TCGATATTGAGACGACGCCCAAGACTGAGGAAGAGTACGCTCAGTCTATG
CTGACTCTTCGCGCCATCGTTTCGTCCAAAGAAGCCGGCATCATCATTGG
CAAGTCTGGCAAGAATGTTGCTGACCTGCGTGACGAAACCGGCGTCAAGG
CTGGTGTGAGCAAGGTGGTTCCTGGTGTTCATGACCGCGTCTTAACCGTC
ACTGGTCCTCTGAACGGCACTGCCAGAGCCTATGCCTTGGTTGCCAAGGG
TTTGCTCGAGGGCGCCCCGCAGATGGGCATGGGTGGCATTGTGTCCAACA
ATGGAACTCACCGTAAGTCATCCAAGTTCTTCTACTCAACCAATATTTAC
TAGTGCCTTACAAACTGACTCTTGTGTAGCCGTTCGGCTTTTGATCTCTC
ACAACCAGATGGGTACTATCATCGGACGCCAAGGTCTCAAGATCAAGCAC
ATTCAGGATGCATCGGGTGTGCGCATGGTCGCGCAGAAGGAAATGCTTCC
CCAGTCGACTGAGCGCATTGTCGAAGTGCAGGGCACCCCCGAGGGTATCG
AGAAGGCCGTCTGGGAAATCGGAAAATGCCTGATTGACGACTGGCAGCGC
GGTACCGGTACTATTCTCTACAACCCCGCTGTCCGTGCGTCTGTTGGAAC
CACCACCAGCACCAGCACCATGAACCAGAGCGTCGGCAATGGCTACAACA
GCCGTCCTTACAACCGCACCGGTAACGGTGCTGACTTCAGCGACCAGTCC
GGTGGCTACGGCAGGCGATCCAACCCCGACACCAGCAACCGTGGTTATCC
GCTTGTCACCGAAGATGGCGAGGAAATCCAAACACAGAACATCAGCATCC
CCGCCGACATGGTTGGCTGCATCATTGGCAGAGGTGGTAGCAAGATCACC
GAGATCCGTAGGAGCTCTGGAGCCCGGATCTCCATCGCCAAGGCTCCCCA
TGACGAAACGGGCGAGCGTATGTTCACCATCATGGGTAGCGCTCAGGCGA
ATGAGAAGGCTCTTTACCTTCTGTATGAGAACCTCGAGGCTGAGAAGACC
CGCCGCAGCCAGCTTCAGGAGTAAACGACCAGCACAGCTTCACCCTCTCT
TCACCCGCTCGACCCTCAATGAACATCCTTTTTCGGAAAACTCTAGTCGC
GCGATCACCACTGCCCCTTCTTGTGCTACTCCTTTTTGATTCTTGATGCT
GTCGTTTTCTCATACTATCATATTCTCTGTTACTCTATAATTCCTCTCGT
ATGTGGAGCTTCTTGCGCTTTACAAGAAGCCGGAGCCTGCTGAGGCGGAC
CATGCATGCCTGTTAGATACCAGTACTATCTCCTTGAATGAACCGCACTC
GGAACCAACGACATCATGTCCCCCCACTGATGTTCCTGACTTCTCCCTTT
back to topCoding sequence (CDS) from alignment at ACJE01000009.1:1589556..1591055- >ASPNIDRAFT_209528-T1 ID=ASPNIDRAFT_209528-T1|Name=ASPNIDRAFT_209528-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2166bp|location=Sequence derived from alignment at ACJE01000009.1:1589556..1591055- (Aspergillus niger ATCC 1015)
CCGTTCGGCTTTTGATCTCTCACAACCAGATGGGTACTATCATCGGACGC
CAAGGTCTCAAGATCAAGCACATTCAGGATGCATCGGGTGTGCGCATGGT
CGCGCAGAAGGAAATGCTTCCCCAGTCGACTGAGCGCATTGTCGAAGTGC
AGGGCACCCCCGAGGGTATCGAGAAGGCCGTCTGGGAAATCGGAAAATGC
CTGATTGACGACTGGCAGCGCGGTACCGGTACTATTCTCTACAACCCCGC
TGTCCGTGCGTCTGTTGGAACCACCACCAGCACCAGCACCATGAACCAGA
GCGTCGGCAATGGCTACAACAGCCGTCCTTACAACCGCACCGGTAACGGT
GCTGACTTCAGCGACCAGTCCGGTGGCTACGGCAGGCGATCCAACCCCGA
CACCAGCAACCGTGGTTATCCGCTTGTCACCGAAGATGGCGAGGAAATCC
AAACACAGAACATCAGCATCCCCGCCGACATGGTTGGCTGCATCATTGGC
AGAGGTGGTAGCAAGATCACCGAGATCCGTAGGAGCTCTGGAGCCCGGAT
CTCCATCGCCAAGGCTCCCCATGACGAAACGGGCGAGCGTATGTTCACCA
TCATGGGTAGCGCTCAGGCGAATGAGAAGGCTCTTTACCTTCTGTATGAG
AACCTCGAGGCTGAGAAGACCCGCCGCAGCCAGCTTCAGGAGTAAATGGA
CCCTACCGAGTTGCACGATACCACCATGGTCGATGAGACCTCCCCCAACA
ACGTCGACATGATTGACGATGTCGATATTGAGACGACGCCCAAGACTGAG
GAAGAGTACGCTCAGTCTATGCTGACTCTTCGCGCCATCGTTTCGTCCAA
AGAAGCCGGCATCATCATTGGCAAGTCTGGCAAGAATGTTGCTGACCTGC
GTGACGAAACCGGCGTCAAGGCTGGTGTGAGCAAGGTGGTTCCTGGTGTT
CATGACCGCGTCTTAACCGTCACTGGTCCTCTGAACGGCACTGCCAGAGC
CTATGCCTTGGTTGCCAAGGGTTTGCTCGAGGGCGCCCCGCAGATGGGCA
TGGGTGGCATTGTGTCCAACAATGGAACTCACCCCGTTCGGCTTTTGATC
TCTCACAACCAGATGGGTACTATCATCGGACGCCAAGGTCTCAAGATCAA
GCACATTCAGGATGCATCGGGTGTGCGCATGGTCGCGCAGAAGGAAATGC
TTCCCCAGTCGACTGAGCGCATTGTCGAAGTGCAGGGCACCCCCGAGGGT
ATCGAGAAGGCCGTCTGGGAAATCGGAAAATGCCTGATTGACGACTGGCA
GCGCGGTACCGGTACTATTCTCTACAACCCCGCTGTCCGTGCGTCTGTTG
GAACCACCACCAGCACCAGCACCATGAACCAGAGCGTCGGCAATGGCTAC
AACAGCCGTCCTTACAACCGCACCGGTAACGGTGCTGACTTCAGCGACCA
GTCCGGTGGCTACGGCAGGCGATCCAACCCCGACACCAGCAACCGTGGTT
ATCCGCTTGTCACCGAAGATGGCGAGGAAATCCAAACACAGAACATCAGC
ATCCCCGCCGACATGGTTGGCTGCATCATTGGCAGAGGTGGTAGCAAGAT
CACCGAGATCCGTAGGAGCTCTGGAGCCCGGATCTCCATCGCCAAGGCTC
CCCATGACGAAACGGGCGAGCGTATGTTCACCATCATGGGTAGCGCTCAG
GCGAATGAGAAGGCTCTTTACCTTCTGTATGAGAACCTCGAGGCTGAGAA
GACCCGCCGCAGCCAGCTTCAGGAGTAAATGGACCCTACCGAGTTGCACG
ATACCACCATGGTCGATGAGACCTCCCCCAACAACGTCGACATGATTGAC
GATGTCGATATTGAGACGACGCCCAAGACTGAGGAAGAGTACGCTCAGTC
TATGCTGACTCTTCGCGCCATCGTTTCGTCCAAAGAAGCCGGCATCATCA
TTGGCAAGTCTGGCAAGAATGTTGCTGACCTGCGTGACGAAACCGGCGTC
AAGGCTGGTGTGAGCAAGGTGGTTCCTGGTGTTCATGACCGCGTCTTAAC
CGTCACTGGTCCTCTGAACGGCACTGCCAGAGCCTATGCCTTGGTTGCCA
AGGGTTTGCTCGAGGGCGCCCCGCAGATGGGCATGGGTGGCATTGTGTCC
AACAATGGAACTCACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004088 |
| DBxref | InterPro:IPR036612 |
| DBxref | InterPro:IPR004087 |
| DBxref | PFAM:PF00013 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:1589556..1591055 - |
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