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ASPNIDRAFT_209541-T1, ASPNIDRAFT_209541-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_209541-T1
Unique NameASPNIDRAFT_209541-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1560190..1561014+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_209541-T1 ID=ASPNIDRAFT_209541-T1|Name=ASPNIDRAFT_209541-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=825bp|location=Sequence derived from alignment at ACJE01000009.1:1560190..1561014+ (Aspergillus niger ATCC 1015)
CTACGACCTTCACTCCATCTACTTCTGAACTAGTCGCTCGACTGTTTCAA
GATGTCTACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCTTCCTGG
TAAGTCTGACTTGGGAACTGGGCTGTATCCGCATGCTGGATGACATGAGG
CTAATACGTACTTTCATCTGCCAGGGTCGCGCCGGTCTTGTTGCCTACCG
TCGCTCCAAGGGAGGTGTGAACGCCATGGGCAAGGCCTTCTACAAGGGGT
TAGTCATATGCCGTTATATCATGAGTTACCGTCATCGATCGCTAACTAGT
ATTCAGTGGTTTCGAGCAGCGCATGACTCGCCGTGAGGCCGCCTTGATTC
TCGAGCTTCCGTACGTCTCAACCCTTCAGACACGCCATATTTTTCGATTT
TTTTCTAACCAACTATATAGGGAGCGTACCCTGAACAAGGACAAGGTCCG
CAAGAAGCACCGTCAGCTCATGCTGCTCAACCACCCCGATCGTGGAGGCA
GCCCGTACCTGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTCGACAAA
CACACTTAAGGCTCCTCCTACTCGGATGCTTAGCTGACGACAGTTCGGGG
CGTTTGTGGTGTGGGAGAGGAAACACGAACATGCACGGGATACTTTAGGT
ATCTTCTATTGTACAAGAGAGATTATATTTAGGGTGTGCATAGCGAGGCG
TTGGTGGGATTCCTTTTTCCGAAGATGAAAGATATGTCTTCGTGCTCCTT
GCGTGGGGCTTTGTATTATTGTCTACTATATCCTGATGAGATCGCCACTC
TTGAATATATTATTATCCGTTTGGT
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Coding sequence (CDS) from alignment at ACJE01000009.1:1560190..1561014+

>ASPNIDRAFT_209541-T1 ID=ASPNIDRAFT_209541-T1|Name=ASPNIDRAFT_209541-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1260bp|location=Sequence derived from alignment at ACJE01000009.1:1560190..1561014+ (Aspergillus niger ATCC 1015)
ATGTCTACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCTTCCTGGG
TCGCGCCGGTCTTGTTGCCTACCGTCGCTCCAAGGGAGGTGTGAACGCCA
TGGGCAAGGCCTTCTACAAGGGTGGTTTCGAGCAGCGCATGACTCGCCGT
GAGGCCGCCTTGATTCTCGAGCTTCCGGAGCGTACCCTGAACAAGGACAA
GGTCCGCAAGAAGCACCGTCAGCTCATGCTGCTCAACCACCCCGATCGTG
GAGGCAGCCCGTACCTGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTC
GACAAACACACTTAAATGTCTACCATTGCTATCGGTCTTGGTGTCGCTAC
TGCGGCCTTCCTGGGTCGCGCCGGTCTTGTTGCCTACCGTCGCTCCAAGG
GAGGTGTGAACGCCATGGGCAAGGCCTTCTACAAGGGTGGTTTCGAGCAG
CGCATGACTCGCCGTGAGGCCGCCTTGATTCTCGAGCTTCCGGAGCGTAC
CCTGAACAAGGACAAGGTCCGCAAGAAGCACCGTCAGCTCATGCTGCTCA
ACCACCCCGATCGTGGAGGCAGCCCGTACCTGGCGACTAAGATCAACGAG
GCCAAGGAGTTCCTCGACAAACACACTTAAATGTCTACCATTGCTATCGG
TCTTGGTGTCGCTACTGCGGCCTTCCTGGGTCGCGCCGGTCTTGTTGCCT
ACCGTCGCTCCAAGGGAGGTGTGAACGCCATGGGCAAGGCCTTCTACAAG
GGTGGTTTCGAGCAGCGCATGACTCGCCGTGAGGCCGCCTTGATTCTCGA
GCTTCCGGAGCGTACCCTGAACAAGGACAAGGTCCGCAAGAAGCACCGTC
AGCTCATGCTGCTCAACCACCCCGATCGTGGAGGCAGCCCGTACCTGGCG
ACTAAGATCAACGAGGCCAAGGAGTTCCTCGACAAACACACTTAAATGTC
TACCATTGCTATCGGTCTTGGTGTCGCTACTGCGGCCTTCCTGGGTCGCG
CCGGTCTTGTTGCCTACCGTCGCTCCAAGGGAGGTGTGAACGCCATGGGC
AAGGCCTTCTACAAGGGTGGTTTCGAGCAGCGCATGACTCGCCGTGAGGC
CGCCTTGATTCTCGAGCTTCCGGAGCGTACCCTGAACAAGGACAAGGTCC
GCAAGAAGCACCGTCAGCTCATGCTGCTCAACCACCCCGATCGTGGAGGC
AGCCCGTACCTGGCGACTAAGATCAACGAGGCCAAGGAGTTCCTCGACAA
ACACACTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PAM18ASPNIDRAFT_209541Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209541-T1ASPNIDRAFT_209541-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209541-T1.utr5p1ASPNIDRAFT_209541-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209541-T1.exon1ASPNIDRAFT_209541-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209541-T1.exon2ASPNIDRAFT_209541-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209541-T1.exon3ASPNIDRAFT_209541-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209541-T1.exon4ASPNIDRAFT_209541-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209541-T1.cdsASPNIDRAFT_209541-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209541-T1.utr3p1ASPNIDRAFT_209541-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001623
DBxrefInterPro:IPR036869
DBxrefPFAM:PF03656
Productmitochondrial import inner membrane translocase subunit TIM14
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1560190..1561014 +
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