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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:86754..88579- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_209964-T1 ID=ASPNIDRAFT_209964-T1|Name=ASPNIDRAFT_209964-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1826bp|location=Sequence derived from alignment at ACJE01000008.1:86754..88579- (Aspergillus niger ATCC 1015)
TTTGCGCGCTGCAGGGTTCATACCTAGCTATATTGGAGGTGAATGGTTTC
ACTCTTACCACTGATTCTTTCCTTCCCAAGCAACAGCAGGACGCCTTTGA
GACTTTAGTTCATATGGTCTGAATCCCTGGTATAATCTCGTGAAAGGCGC
GCGCGCACGGCAGAAAGAGTACATAGAGTAACCTTTCCGCGCATTCGCAT
CCAGTCACCATCATATCCGGGCAATCTCTCAAAATAATGGATCGCAAGGC
CTTTGATATTCAGCCCATTGGCCGCTTCTACGGAGCTAGCGCTGCCATTC
GACGTCCAAAGGTAAGCTTAGTATAATTCATTCCGAATGCTCAAAGTCAA
CCCTTAACCCTTGTCCAGGAGATTGCATGTTTCTCTTATGATGATGAGCA
TAAGTTCCATCTCGGAGATTCATCGATGAAATACTACTATCCGCCATGCC
TTCCCGCGGACCTGAACCGCGGATTCGAGTCATTTCAAAAGCTGGATGAT
TCAGCCGATGAGCATCTAGATGCTCTGCTCGAGACAGTCATAGCCCTGGA
ACAAGAAACGCAGAAGAAATGTGAAGCTGATATTATCACCTGGAGAGGCA
TGATGACCAAGGTAGACCCCGCCTATAATGTGTTCAGTCGTATGGGATCG
AAAGATATGCTTATGTTGGATTTGTCTAGATCCTTGCAGCTCCTTTTGAT
AACTTAAATGGGTGTGTATTCTCGATTTGTCGTTCTTCTGCTTCAGCTAT
TGATTTGCGTACAGCTTCGAAATGAACGCTACCTGCTTCCAGGTATGTCA
ATTAGCCATCGATTTAGGGACTCTTTGCTAATGTGCTTCCAGGGAACAAT
GTTGGTTTATGCTAGCCTGCTATATCTACTGGCTCCTGACTCTAATTACC
GTCCAGATTTATCGAAGAGAACAACAGCTACAAGAATGAGCAGAAACGAA
TTCAGAAAAATCAACGAATGCCTCCGGGAATGGCATCCCAGGATCTGATG
GCCTACTGGGGTAAGAGCTCTCTTTCCCTTACGGTTAGAAACGTCATTGA
CCGAGTCAGGGTATAAATTTGAGACTCTGTCGGTGCTTAATGAACCGTGG
GATCCGACTCCACGCAGAGAGATTGAAAACCGAGAGGAACTCATTGTGAA
CAACAATGCCCAGTATTGTTCAGTGGTGCGCACTGCAATCGGCCGCGCAC
GCCTAGTCATTGGTGGGGAGGTAGATGCGAGTATGTCAAAAGGCCACCCA
CCACTCCGTCACAACCACGTGCCACAGCGCATATATCATGTTCTAACGCA
TCCTGTTCACAGTCTGGGATTGCAAACCTGAGCGCAAGGAAGATCCCATC
CATTGGGTAGAACTGAAAACCTCCGCCGAGATTAGAAATGACCGGGACAT
GGTGAAATACGAAAGGAAGCTCCTGAAATTCTGGGCCCAGTCATTCTTAC
TCGGGGTACCCAAGATCGTTGTCGGCTTTCGGGACCAACATGGTATTGTT
CATCGTCTTGAGGAGCTCGAGACTGCTGCCATACCCGGAAAAGTCAAGAA
GCTTGGCCGGTCGACTTGGGACGGAAATATCTGCATTAACTTCGCTGCCA
CGTTCCTTGAATGTGCGTATACAATCAATCTTTTCGCCCGAATTAAAAGA
AAGAAGCAGGATCTAAACTGACTGATACAGGGCTTAAAACTACCATTCAA
GAGGAAGGCACATGGAGAATACGCAAACGGGAGAAATCGTCGCTTATTGA
AGTCTTCAGGGTGGAGGAGAGTGGAACTGGCGATATTATCTCACCAGCAT
TTTCGGCCTGGAGGTCCAAATCTTGA back to topCoding sequence (CDS) from alignment at ACJE01000008.1:86754..88579- >ASPNIDRAFT_209964-T1 ID=ASPNIDRAFT_209964-T1|Name=ASPNIDRAFT_209964-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=8568bp|location=Sequence derived from alignment at ACJE01000008.1:86754..88579- (Aspergillus niger ATCC 1015)
GGCTTAAAACTACCATTCAAGAGGAAGGCACATGGAGAATACGCAAACGG
GAGAAATCGTCGCTTATTGAAGTCTTCAGGGTGGAGGAGAGTGGAACTGG
CGATATTATCTCACCAGCATTTTCGGCCTGGAGGTCCAAATCTTGATCTG
GGATTGCAAACCTGAGCGCAAGGAAGATCCCATCCATTGGGTAGAACTGA
AAACCTCCGCCGAGATTAGAAATGACCGGGACATGGTGAAATACGAAAGG
AAGCTCCTGAAATTCTGGGCCCAGTCATTCTTACTCGGGGTACCCAAGAT
CGTTGTCGGCTTTCGGGACCAACATGGTATTGTTCATCGTCTTGAGGAGC
TCGAGACTGCTGCCATACCCGGAAAAGTCAAGAAGCTTGGCCGGTCGACT
TGGGACGGAAATATCTGCATTAACTTCGCTGCCACGTTCCTTGAATGGTA
TAAATTTGAGACTCTGTCGGTGCTTAATGAACCGTGGGATCCGACTCCAC
GCAGAGAGATTGAAAACCGAGAGGAACTCATTGTGAACAACAATGCCCAG
TATTGTTCAGTGGTGCGCACTGCAATCGGCCGCGCACGCCTAGTCATTGG
TGGGGAGGTAGATGCGAAATGAGCAGAAACGAATTCAGAAAAATCAACGA
ATGCCTCCGGGAATGGCATCCCAGGATCTGATGGCCTACTGGGCTTCGAA
ATGAACGCTACCTGCTTCCAGATCCTTGCAGCTCCTTTTGATAACTTAAA
TGGGAGATTGCATGTTTCTCTTATGATGATGAGCATAAGTTCCATCTCGG
AGATTCATCGATGAAATACTACTATCCGCCATGCCTTCCCGCGGACCTGA
ACCGCGGATTCGAGTCATTTCAAAAGCTGGATGATTCAGCCGATGAGCAT
CTAGATGCTCTGCTCGAGACAGTCATAGCCCTGGAACAAGAAACGCAGAA
GAAATGTGAAGCTGATATTATCACCTGGAGAGGCATGATGACCAAGATGG
ATCGCAAGGCCTTTGATATTCAGCCCATTGGCCGCTTCTACGGAGCTAGC
GCTGCCATTCGACGTCCAAAGGGCTTAAAACTACCATTCAAGAGGAAGGC
ACATGGAGAATACGCAAACGGGAGAAATCGTCGCTTATTGAAGTCTTCAG
GGTGGAGGAGAGTGGAACTGGCGATATTATCTCACCAGCATTTTCGGCCT
GGAGGTCCAAATCTTGATCTGGGATTGCAAACCTGAGCGCAAGGAAGATC
CCATCCATTGGGTAGAACTGAAAACCTCCGCCGAGATTAGAAATGACCGG
GACATGGTGAAATACGAAAGGAAGCTCCTGAAATTCTGGGCCCAGTCATT
CTTACTCGGGGTACCCAAGATCGTTGTCGGCTTTCGGGACCAACATGGTA
TTGTTCATCGTCTTGAGGAGCTCGAGACTGCTGCCATACCCGGAAAAGTC
AAGAAGCTTGGCCGGTCGACTTGGGACGGAAATATCTGCATTAACTTCGC
TGCCACGTTCCTTGAATGGTATAAATTTGAGACTCTGTCGGTGCTTAATG
AACCGTGGGATCCGACTCCACGCAGAGAGATTGAAAACCGAGAGGAACTC
ATTGTGAACAACAATGCCCAGTATTGTTCAGTGGTGCGCACTGCAATCGG
CCGCGCACGCCTAGTCATTGGTGGGGAGGTAGATGCGAAATGAGCAGAAA
CGAATTCAGAAAAATCAACGAATGCCTCCGGGAATGGCATCCCAGGATCT
GATGGCCTACTGGGCTTCGAAATGAACGCTACCTGCTTCCAGATCCTTGC
AGCTCCTTTTGATAACTTAAATGGGAGATTGCATGTTTCTCTTATGATGA
TGAGCATAAGTTCCATCTCGGAGATTCATCGATGAAATACTACTATCCGC
CATGCCTTCCCGCGGACCTGAACCGCGGATTCGAGTCATTTCAAAAGCTG
GATGATTCAGCCGATGAGCATCTAGATGCTCTGCTCGAGACAGTCATAGC
CCTGGAACAAGAAACGCAGAAGAAATGTGAAGCTGATATTATCACCTGGA
GAGGCATGATGACCAAGATGGATCGCAAGGCCTTTGATATTCAGCCCATT
GGCCGCTTCTACGGAGCTAGCGCTGCCATTCGACGTCCAAAGGGCTTAAA
ACTACCATTCAAGAGGAAGGCACATGGAGAATACGCAAACGGGAGAAATC
GTCGCTTATTGAAGTCTTCAGGGTGGAGGAGAGTGGAACTGGCGATATTA
TCTCACCAGCATTTTCGGCCTGGAGGTCCAAATCTTGATCTGGGATTGCA
AACCTGAGCGCAAGGAAGATCCCATCCATTGGGTAGAACTGAAAACCTCC
GCCGAGATTAGAAATGACCGGGACATGGTGAAATACGAAAGGAAGCTCCT
GAAATTCTGGGCCCAGTCATTCTTACTCGGGGTACCCAAGATCGTTGTCG
GCTTTCGGGACCAACATGGTATTGTTCATCGTCTTGAGGAGCTCGAGACT
GCTGCCATACCCGGAAAAGTCAAGAAGCTTGGCCGGTCGACTTGGGACGG
AAATATCTGCATTAACTTCGCTGCCACGTTCCTTGAATGGTATAAATTTG
AGACTCTGTCGGTGCTTAATGAACCGTGGGATCCGACTCCACGCAGAGAG
ATTGAAAACCGAGAGGAACTCATTGTGAACAACAATGCCCAGTATTGTTC
AGTGGTGCGCACTGCAATCGGCCGCGCACGCCTAGTCATTGGTGGGGAGG
TAGATGCGAAATGAGCAGAAACGAATTCAGAAAAATCAACGAATGCCTCC
GGGAATGGCATCCCAGGATCTGATGGCCTACTGGGCTTCGAAATGAACGC
TACCTGCTTCCAGATCCTTGCAGCTCCTTTTGATAACTTAAATGGGAGAT
TGCATGTTTCTCTTATGATGATGAGCATAAGTTCCATCTCGGAGATTCAT
CGATGAAATACTACTATCCGCCATGCCTTCCCGCGGACCTGAACCGCGGA
TTCGAGTCATTTCAAAAGCTGGATGATTCAGCCGATGAGCATCTAGATGC
TCTGCTCGAGACAGTCATAGCCCTGGAACAAGAAACGCAGAAGAAATGTG
AAGCTGATATTATCACCTGGAGAGGCATGATGACCAAGATGGATCGCAAG
GCCTTTGATATTCAGCCCATTGGCCGCTTCTACGGAGCTAGCGCTGCCAT
TCGACGTCCAAAGGGCTTAAAACTACCATTCAAGAGGAAGGCACATGGAG
AATACGCAAACGGGAGAAATCGTCGCTTATTGAAGTCTTCAGGGTGGAGG
AGAGTGGAACTGGCGATATTATCTCACCAGCATTTTCGGCCTGGAGGTCC
AAATCTTGATCTGGGATTGCAAACCTGAGCGCAAGGAAGATCCCATCCAT
TGGGTAGAACTGAAAACCTCCGCCGAGATTAGAAATGACCGGGACATGGT
GAAATACGAAAGGAAGCTCCTGAAATTCTGGGCCCAGTCATTCTTACTCG
GGGTACCCAAGATCGTTGTCGGCTTTCGGGACCAACATGGTATTGTTCAT
CGTCTTGAGGAGCTCGAGACTGCTGCCATACCCGGAAAAGTCAAGAAGCT
TGGCCGGTCGACTTGGGACGGAAATATCTGCATTAACTTCGCTGCCACGT
TCCTTGAATGGTATAAATTTGAGACTCTGTCGGTGCTTAATGAACCGTGG
GATCCGACTCCACGCAGAGAGATTGAAAACCGAGAGGAACTCATTGTGAA
CAACAATGCCCAGTATTGTTCAGTGGTGCGCACTGCAATCGGCCGCGCAC
GCCTAGTCATTGGTGGGGAGGTAGATGCGAAATGAGCAGAAACGAATTCA
GAAAAATCAACGAATGCCTCCGGGAATGGCATCCCAGGATCTGATGGCCT
ACTGGGCTTCGAAATGAACGCTACCTGCTTCCAGATCCTTGCAGCTCCTT
TTGATAACTTAAATGGGAGATTGCATGTTTCTCTTATGATGATGAGCATA
AGTTCCATCTCGGAGATTCATCGATGAAATACTACTATCCGCCATGCCTT
CCCGCGGACCTGAACCGCGGATTCGAGTCATTTCAAAAGCTGGATGATTC
AGCCGATGAGCATCTAGATGCTCTGCTCGAGACAGTCATAGCCCTGGAAC
AAGAAACGCAGAAGAAATGTGAAGCTGATATTATCACCTGGAGAGGCATG
ATGACCAAGATGGATCGCAAGGCCTTTGATATTCAGCCCATTGGCCGCTT
CTACGGAGCTAGCGCTGCCATTCGACGTCCAAAGGGCTTAAAACTACCAT
TCAAGAGGAAGGCACATGGAGAATACGCAAACGGGAGAAATCGTCGCTTA
TTGAAGTCTTCAGGGTGGAGGAGAGTGGAACTGGCGATATTATCTCACCA
GCATTTTCGGCCTGGAGGTCCAAATCTTGATCTGGGATTGCAAACCTGAG
CGCAAGGAAGATCCCATCCATTGGGTAGAACTGAAAACCTCCGCCGAGAT
TAGAAATGACCGGGACATGGTGAAATACGAAAGGAAGCTCCTGAAATTCT
GGGCCCAGTCATTCTTACTCGGGGTACCCAAGATCGTTGTCGGCTTTCGG
GACCAACATGGTATTGTTCATCGTCTTGAGGAGCTCGAGACTGCTGCCAT
ACCCGGAAAAGTCAAGAAGCTTGGCCGGTCGACTTGGGACGGAAATATCT
GCATTAACTTCGCTGCCACGTTCCTTGAATGGTATAAATTTGAGACTCTG
TCGGTGCTTAATGAACCGTGGGATCCGACTCCACGCAGAGAGATTGAAAA
CCGAGAGGAACTCATTGTGAACAACAATGCCCAGTATTGTTCAGTGGTGC
GCACTGCAATCGGCCGCGCACGCCTAGTCATTGGTGGGGAGGTAGATGCG
AAATGAGCAGAAACGAATTCAGAAAAATCAACGAATGCCTCCGGGAATGG
CATCCCAGGATCTGATGGCCTACTGGGCTTCGAAATGAACGCTACCTGCT
TCCAGATCCTTGCAGCTCCTTTTGATAACTTAAATGGGAGATTGCATGTT
TCTCTTATGATGATGAGCATAAGTTCCATCTCGGAGATTCATCGATGAAA
TACTACTATCCGCCATGCCTTCCCGCGGACCTGAACCGCGGATTCGAGTC
ATTTCAAAAGCTGGATGATTCAGCCGATGAGCATCTAGATGCTCTGCTCG
AGACAGTCATAGCCCTGGAACAAGAAACGCAGAAGAAATGTGAAGCTGAT
ATTATCACCTGGAGAGGCATGATGACCAAGATGGATCGCAAGGCCTTTGA
TATTCAGCCCATTGGCCGCTTCTACGGAGCTAGCGCTGCCATTCGACGTC
CAAAGGGCTTAAAACTACCATTCAAGAGGAAGGCACATGGAGAATACGCA
AACGGGAGAAATCGTCGCTTATTGAAGTCTTCAGGGTGGAGGAGAGTGGA
ACTGGCGATATTATCTCACCAGCATTTTCGGCCTGGAGGTCCAAATCTTG
ATCTGGGATTGCAAACCTGAGCGCAAGGAAGATCCCATCCATTGGGTAGA
ACTGAAAACCTCCGCCGAGATTAGAAATGACCGGGACATGGTGAAATACG
AAAGGAAGCTCCTGAAATTCTGGGCCCAGTCATTCTTACTCGGGGTACCC
AAGATCGTTGTCGGCTTTCGGGACCAACATGGTATTGTTCATCGTCTTGA
GGAGCTCGAGACTGCTGCCATACCCGGAAAAGTCAAGAAGCTTGGCCGGT
CGACTTGGGACGGAAATATCTGCATTAACTTCGCTGCCACGTTCCTTGAA
TGGTATAAATTTGAGACTCTGTCGGTGCTTAATGAACCGTGGGATCCGAC
TCCACGCAGAGAGATTGAAAACCGAGAGGAACTCATTGTGAACAACAATG
CCCAGTATTGTTCAGTGGTGCGCACTGCAATCGGCCGCGCACGCCTAGTC
ATTGGTGGGGAGGTAGATGCGAAATGAGCAGAAACGAATTCAGAAAAATC
AACGAATGCCTCCGGGAATGGCATCCCAGGATCTGATGGCCTACTGGGCT
TCGAAATGAACGCTACCTGCTTCCAGATCCTTGCAGCTCCTTTTGATAAC
TTAAATGGGAGATTGCATGTTTCTCTTATGATGATGAGCATAAGTTCCAT
CTCGGAGATTCATCGATGAAATACTACTATCCGCCATGCCTTCCCGCGGA
CCTGAACCGCGGATTCGAGTCATTTCAAAAGCTGGATGATTCAGCCGATG
AGCATCTAGATGCTCTGCTCGAGACAGTCATAGCCCTGGAACAAGAAACG
CAGAAGAAATGTGAAGCTGATATTATCACCTGGAGAGGCATGATGACCAA
GATGGATCGCAAGGCCTTTGATATTCAGCCCATTGGCCGCTTCTACGGAG
CTAGCGCTGCCATTCGACGTCCAAAGGGCTTAAAACTACCATTCAAGAGG
AAGGCACATGGAGAATACGCAAACGGGAGAAATCGTCGCTTATTGAAGTC
TTCAGGGTGGAGGAGAGTGGAACTGGCGATATTATCTCACCAGCATTTTC
GGCCTGGAGGTCCAAATCTTGATCTGGGATTGCAAACCTGAGCGCAAGGA
AGATCCCATCCATTGGGTAGAACTGAAAACCTCCGCCGAGATTAGAAATG
ACCGGGACATGGTGAAATACGAAAGGAAGCTCCTGAAATTCTGGGCCCAG
TCATTCTTACTCGGGGTACCCAAGATCGTTGTCGGCTTTCGGGACCAACA
TGGTATTGTTCATCGTCTTGAGGAGCTCGAGACTGCTGCCATACCCGGAA
AAGTCAAGAAGCTTGGCCGGTCGACTTGGGACGGAAATATCTGCATTAAC
TTCGCTGCCACGTTCCTTGAATGGTATAAATTTGAGACTCTGTCGGTGCT
TAATGAACCGTGGGATCCGACTCCACGCAGAGAGATTGAAAACCGAGAGG
AACTCATTGTGAACAACAATGCCCAGTATTGTTCAGTGGTGCGCACTGCA
ATCGGCCGCGCACGCCTAGTCATTGGTGGGGAGGTAGATGCGAAATGAGC
AGAAACGAATTCAGAAAAATCAACGAATGCCTCCGGGAATGGCATCCCAG
GATCTGATGGCCTACTGGGCTTCGAAATGAACGCTACCTGCTTCCAGATC
CTTGCAGCTCCTTTTGATAACTTAAATGGGAGATTGCATGTTTCTCTTAT
GATGATGAGCATAAGTTCCATCTCGGAGATTCATCGATGAAATACTACTA
TCCGCCATGCCTTCCCGCGGACCTGAACCGCGGATTCGAGTCATTTCAAA
AGCTGGATGATTCAGCCGATGAGCATCTAGATGCTCTGCTCGAGACAGTC
ATAGCCCTGGAACAAGAAACGCAGAAGAAATGTGAAGCTGATATTATCAC
CTGGAGAGGCATGATGACCAAGATGGATCGCAAGGCCTTTGATATTCAGC
CCATTGGCCGCTTCTACGGAGCTAGCGCTGCCATTCGACGTCCAAAGGGC
TTAAAACTACCATTCAAGAGGAAGGCACATGGAGAATACGCAAACGGGAG
AAATCGTCGCTTATTGAAGTCTTCAGGGTGGAGGAGAGTGGAACTGGCGA
TATTATCTCACCAGCATTTTCGGCCTGGAGGTCCAAATCTTGATCTGGGA
TTGCAAACCTGAGCGCAAGGAAGATCCCATCCATTGGGTAGAACTGAAAA
CCTCCGCCGAGATTAGAAATGACCGGGACATGGTGAAATACGAAAGGAAG
CTCCTGAAATTCTGGGCCCAGTCATTCTTACTCGGGGTACCCAAGATCGT
TGTCGGCTTTCGGGACCAACATGGTATTGTTCATCGTCTTGAGGAGCTCG
AGACTGCTGCCATACCCGGAAAAGTCAAGAAGCTTGGCCGGTCGACTTGG
GACGGAAATATCTGCATTAACTTCGCTGCCACGTTCCTTGAATGGTATAA
ATTTGAGACTCTGTCGGTGCTTAATGAACCGTGGGATCCGACTCCACGCA
GAGAGATTGAAAACCGAGAGGAACTCATTGTGAACAACAATGCCCAGTAT
TGTTCAGTGGTGCGCACTGCAATCGGCCGCGCACGCCTAGTCATTGGTGG
GGAGGTAGATGCGAAATGAGCAGAAACGAATTCAGAAAAATCAACGAATG
CCTCCGGGAATGGCATCCCAGGATCTGATGGCCTACTGGGCTTCGAAATG
AACGCTACCTGCTTCCAGATCCTTGCAGCTCCTTTTGATAACTTAAATGG
GAGATTGCATGTTTCTCTTATGATGATGAGCATAAGTTCCATCTCGGAGA
TTCATCGATGAAATACTACTATCCGCCATGCCTTCCCGCGGACCTGAACC
GCGGATTCGAGTCATTTCAAAAGCTGGATGATTCAGCCGATGAGCATCTA
GATGCTCTGCTCGAGACAGTCATAGCCCTGGAACAAGAAACGCAGAAGAA
ATGTGAAGCTGATATTATCACCTGGAGAGGCATGATGACCAAGATGGATC
GCAAGGCCTTTGATATTCAGCCCATTGGCCGCTTCTACGGAGCTAGCGCT
GCCATTCGACGTCCAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013961 |
| DBxref | PFAM:PF08652 |
| Product | decapping endonuclease targeting mRNA |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:86754..88579 - |
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