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ASPNIDRAFT_210029-T1, ASPNIDRAFT_210029-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210029-T1
Unique NameASPNIDRAFT_210029-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:229574..231226-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210029-T1 ID=ASPNIDRAFT_210029-T1|Name=ASPNIDRAFT_210029-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1653bp|location=Sequence derived from alignment at ACJE01000008.1:229574..231226- (Aspergillus niger ATCC 1015)
CCTCCTCCTCTCTCCCTTTTTTTCTCTTCTTCTTCTCCTCCCTCCTCATC
TTCCTCCCACACATCCTTCACAATGGCCTTCGGAAAGCTCTACGGTCTCC
CTGTATGTGTTTCTGCATGTGTTCAGGAAGCTGTTCTTCCCCTTCACAGG
GTTTAGATTAGCTTCCTATTGCTGTCGCTGAGAACACCTGGCTAATAGAC
TCCATAGGAGAACGGTCGCACCATTGCCTGCCTCGTCGCGGCTAAGGCCA
ACGACGTTGAGCTTGAGCTGGTCAAGACTGAGCCCAACTCTGGTGCCTCT
TTCAACCAGTCTGCTGAGTACACCAAGATCAGCCCCCTCGGCAAGATCCC
CGCCTTCGAGGGTGCCAACGGCTACACTCTGTCTGAGGTCATTGCCATCG
CTGTCTACGGTACGTTCTCCCTGAATACGCCCTGCGCGTTGCAATCTCGT
TTGCTTGTTTTATGATGAGTATTTTATTTCAAGTTATCCCTGTCAGAACT
GGTAATAATAAAAATAATGTTGATAACGTTTGACTCTGAAAAAAACCATC
TCTTTACCCCACTTTGGGGGTGAAGAGATTTCGTTTTGATTATTTGATGA
TCACGCAATTGTCATTTGGTTGGACAACTCATGCTGACTCGAATAAAAGT
GACCTCCCAGAACGAGAAGACCACCCTCTTGGGTAAGACCAAGCAGGACT
ACGCTTCCATCCTTCGTTGGTTGTCCTTCGCCAACTCCGAGCTCCTCCCC
CGCTTCGGTGCCTGGTTCCGCCCTCTGTTGGGTCTTGACGGCTACAACAA
GAAGAACGTCGAGGATGCTTCCAAGGCTGCTCTGAAGAACGCTGGCGTTC
TCAACACCTACCTCACTGCCAACACCTTCCTTGTTGGCGAGCGCATCTCC
CTGGCTGATTACTTCACTGCCGCTCTCCTCACCCGTGCCTTCGCTACCGT
CCTGGACAAGAAGTTCCGTGACGAGAACGTTGCCATCACCCGCTGGTACA
AGACCATCGTCAACCAGCCCGCCTTCAAGGCTGTCTTCGAGAACCCCGTC
TTCGTCGAGGAGTGCATCAAGTACACTCCCCCCAAGAAGGAGGAGAAGCC
CAAGAAGGAGGCTGCCCCCGCTGCCGCTGCCCCCGCTGAGCCCAAGCCCG
CTGAGGAGAAGAAGCCCAAGCACCCCCTTGAGGCTCTTGGCCGCTCCGAG
TTCGTCCTTGACGAGTGGAAGCGCCAGTACTCCAACGAGGACACCCGCCC
CGTTGCTCTGCCCTGGTTCTGGCAGAACTACAAGCCCGAGGAGTACTCCC
TCTGGTCCGTTAACTACAAGTACAACAACGAGCTGAAGCTTACCTTCATG
GCCAACAACCTGATCGGTGGTTTCCACGCCCGTCTTGAGGCTTCCCGCAA
GTACCTCTTCGGTGCCCAGGCCGTCTACGGTGCCAACTACGACTGTGTCA
TCCAGGGTGTCTTCCTGGTCCGCGGCCAGGACTCCCAGCCCGCTTTCGAG
GTCGGCCCCGACTGGGAGAGCTACGAGTTCCGCAAGCTCGACCACACCAA
CCCCGAGGACCGCAAGCTCATCGAGGACCAGTGGGCTTGGGATGTCCCCG
TCGTCATTGACGGCAAGGAGTACCCCTTCGCTGACGGCCACGTCTTCAAA
TAA
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Coding sequence (CDS) from alignment at ACJE01000008.1:229574..231226-

>ASPNIDRAFT_210029-T1 ID=ASPNIDRAFT_210029-T1|Name=ASPNIDRAFT_210029-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3708bp|location=Sequence derived from alignment at ACJE01000008.1:229574..231226- (Aspergillus niger ATCC 1015)
TGACCTCCCAGAACGAGAAGACCACCCTCTTGGGTAAGACCAAGCAGGAC
TACGCTTCCATCCTTCGTTGGTTGTCCTTCGCCAACTCCGAGCTCCTCCC
CCGCTTCGGTGCCTGGTTCCGCCCTCTGTTGGGTCTTGACGGCTACAACA
AGAAGAACGTCGAGGATGCTTCCAAGGCTGCTCTGAAGAACGCTGGCGTT
CTCAACACCTACCTCACTGCCAACACCTTCCTTGTTGGCGAGCGCATCTC
CCTGGCTGATTACTTCACTGCCGCTCTCCTCACCCGTGCCTTCGCTACCG
TCCTGGACAAGAAGTTCCGTGACGAGAACGTTGCCATCACCCGCTGGTAC
AAGACCATCGTCAACCAGCCCGCCTTCAAGGCTGTCTTCGAGAACCCCGT
CTTCGTCGAGGAGTGCATCAAGTACACTCCCCCCAAGAAGGAGGAGAAGC
CCAAGAAGGAGGCTGCCCCCGCTGCCGCTGCCCCCGCTGAGCCCAAGCCC
GCTGAGGAGAAGAAGCCCAAGCACCCCCTTGAGGCTCTTGGCCGCTCCGA
GTTCGTCCTTGACGAGTGGAAGCGCCAGTACTCCAACGAGGACACCCGCC
CCGTTGCTCTGCCCTGGTTCTGGCAGAACTACAAGCCCGAGGAGTACTCC
CTCTGGTCCGTTAACTACAAGTACAACAACGAGCTGAAGCTTACCTTCAT
GGCCAACAACCTGATCGGTGGTTTCCACGCCCGTCTTGAGGCTTCCCGCA
AGTACCTCTTCGGTGCCCAGGCCGTCTACGGTGCCAACTACGACTGTGTC
ATCCAGGGTGTCTTCCTGGTCCGCGGCCAGGACTCCCAGCCCGCTTTCGA
GGTCGGCCCCGACTGGGAGAGCTACGAGTTCCGCAAGCTCGACCACACCA
ACCCCGAGGACCGCAAGCTCATCGAGGACCAGTGGGCTTGGGATGTCCCC
GTCGTCATTGACGGCAAGGAGTACCCCTTCGCTGACGGCCACGTCTTCAA
ATAAGAGAACGGTCGCACCATTGCCTGCCTCGTCGCGGCTAAGGCCAACG
ACGTTGAGCTTGAGCTGGTCAAGACTGAGCCCAACTCTGGTGCCTCTTTC
AACCAGTCTGCTGAGTACACCAAGATCAGCCCCCTCGGCAAGATCCCCGC
CTTCGAGGGTGCCAACGGCTACACTCTGTCTGAGGTCATTGCCATCGCTG
TCTACGATGGCCTTCGGAAAGCTCTACGGTCTCCCTTGACCTCCCAGAAC
GAGAAGACCACCCTCTTGGGTAAGACCAAGCAGGACTACGCTTCCATCCT
TCGTTGGTTGTCCTTCGCCAACTCCGAGCTCCTCCCCCGCTTCGGTGCCT
GGTTCCGCCCTCTGTTGGGTCTTGACGGCTACAACAAGAAGAACGTCGAG
GATGCTTCCAAGGCTGCTCTGAAGAACGCTGGCGTTCTCAACACCTACCT
CACTGCCAACACCTTCCTTGTTGGCGAGCGCATCTCCCTGGCTGATTACT
TCACTGCCGCTCTCCTCACCCGTGCCTTCGCTACCGTCCTGGACAAGAAG
TTCCGTGACGAGAACGTTGCCATCACCCGCTGGTACAAGACCATCGTCAA
CCAGCCCGCCTTCAAGGCTGTCTTCGAGAACCCCGTCTTCGTCGAGGAGT
GCATCAAGTACACTCCCCCCAAGAAGGAGGAGAAGCCCAAGAAGGAGGCT
GCCCCCGCTGCCGCTGCCCCCGCTGAGCCCAAGCCCGCTGAGGAGAAGAA
GCCCAAGCACCCCCTTGAGGCTCTTGGCCGCTCCGAGTTCGTCCTTGACG
AGTGGAAGCGCCAGTACTCCAACGAGGACACCCGCCCCGTTGCTCTGCCC
TGGTTCTGGCAGAACTACAAGCCCGAGGAGTACTCCCTCTGGTCCGTTAA
CTACAAGTACAACAACGAGCTGAAGCTTACCTTCATGGCCAACAACCTGA
TCGGTGGTTTCCACGCCCGTCTTGAGGCTTCCCGCAAGTACCTCTTCGGT
GCCCAGGCCGTCTACGGTGCCAACTACGACTGTGTCATCCAGGGTGTCTT
CCTGGTCCGCGGCCAGGACTCCCAGCCCGCTTTCGAGGTCGGCCCCGACT
GGGAGAGCTACGAGTTCCGCAAGCTCGACCACACCAACCCCGAGGACCGC
AAGCTCATCGAGGACCAGTGGGCTTGGGATGTCCCCGTCGTCATTGACGG
CAAGGAGTACCCCTTCGCTGACGGCCACGTCTTCAAATAAGAGAACGGTC
GCACCATTGCCTGCCTCGTCGCGGCTAAGGCCAACGACGTTGAGCTTGAG
CTGGTCAAGACTGAGCCCAACTCTGGTGCCTCTTTCAACCAGTCTGCTGA
GTACACCAAGATCAGCCCCCTCGGCAAGATCCCCGCCTTCGAGGGTGCCA
ACGGCTACACTCTGTCTGAGGTCATTGCCATCGCTGTCTACGATGGCCTT
CGGAAAGCTCTACGGTCTCCCTTGACCTCCCAGAACGAGAAGACCACCCT
CTTGGGTAAGACCAAGCAGGACTACGCTTCCATCCTTCGTTGGTTGTCCT
TCGCCAACTCCGAGCTCCTCCCCCGCTTCGGTGCCTGGTTCCGCCCTCTG
TTGGGTCTTGACGGCTACAACAAGAAGAACGTCGAGGATGCTTCCAAGGC
TGCTCTGAAGAACGCTGGCGTTCTCAACACCTACCTCACTGCCAACACCT
TCCTTGTTGGCGAGCGCATCTCCCTGGCTGATTACTTCACTGCCGCTCTC
CTCACCCGTGCCTTCGCTACCGTCCTGGACAAGAAGTTCCGTGACGAGAA
CGTTGCCATCACCCGCTGGTACAAGACCATCGTCAACCAGCCCGCCTTCA
AGGCTGTCTTCGAGAACCCCGTCTTCGTCGAGGAGTGCATCAAGTACACT
CCCCCCAAGAAGGAGGAGAAGCCCAAGAAGGAGGCTGCCCCCGCTGCCGC
TGCCCCCGCTGAGCCCAAGCCCGCTGAGGAGAAGAAGCCCAAGCACCCCC
TTGAGGCTCTTGGCCGCTCCGAGTTCGTCCTTGACGAGTGGAAGCGCCAG
TACTCCAACGAGGACACCCGCCCCGTTGCTCTGCCCTGGTTCTGGCAGAA
CTACAAGCCCGAGGAGTACTCCCTCTGGTCCGTTAACTACAAGTACAACA
ACGAGCTGAAGCTTACCTTCATGGCCAACAACCTGATCGGTGGTTTCCAC
GCCCGTCTTGAGGCTTCCCGCAAGTACCTCTTCGGTGCCCAGGCCGTCTA
CGGTGCCAACTACGACTGTGTCATCCAGGGTGTCTTCCTGGTCCGCGGCC
AGGACTCCCAGCCCGCTTTCGAGGTCGGCCCCGACTGGGAGAGCTACGAG
TTCCGCAAGCTCGACCACACCAACCCCGAGGACCGCAAGCTCATCGAGGA
CCAGTGGGCTTGGGATGTCCCCGTCGTCATTGACGGCAAGGAGTACCCCT
TCGCTGACGGCCACGTCTTCAAATAAGAGAACGGTCGCACCATTGCCTGC
CTCGTCGCGGCTAAGGCCAACGACGTTGAGCTTGAGCTGGTCAAGACTGA
GCCCAACTCTGGTGCCTCTTTCAACCAGTCTGCTGAGTACACCAAGATCA
GCCCCCTCGGCAAGATCCCCGCCTTCGAGGGTGCCAACGGCTACACTCTG
TCTGAGGTCATTGCCATCGCTGTCTACGATGGCCTTCGGAAAGCTCTACG
GTCTCCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003746translation elongation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210029ASPNIDRAFT_210029Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210029-T1ASPNIDRAFT_210029-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210029-T1.cdsASPNIDRAFT_210029-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210029-T1.exon3ASPNIDRAFT_210029-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210029-T1.exon2ASPNIDRAFT_210029-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210029-T1.exon1ASPNIDRAFT_210029-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210029-T1.utr5p1ASPNIDRAFT_210029-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR036433
DBxrefInterPro:IPR001662
DBxrefPFAM:PF02798
DBxrefPFAM:PF00043
DBxrefPFAM:PF00647
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:229574..231226 -
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