ASPNIDRAFT_210080-T1, ASPNIDRAFT_210080-T1 (mRNA) Aspergillus niger ATCC 1015

Overview


Name	ASPNIDRAFT_210080-T1
Unique Name	ASPNIDRAFT_210080-T1
Type	mRNA
Organism	Aspergillus niger ATCC 1015

Sequences

The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:477717..479773-
coding sequence from alignment at ACJE01000008.1:477717..479773-

mRNA from alignment at ACJE01000008.1:477717..479773-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>ASPNIDRAFT_210080-T1 ID=ASPNIDRAFT_210080-T1|Name=ASPNIDRAFT_210080-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2057bp|location=Sequence derived from alignment at ACJE01000008.1:477717..479773- (Aspergillus niger ATCC 1015)
CAGCATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGGTAGTCCTGT
GGTCGAAATCGTACGCGCCCGTCGGGGCGCATATTGTTAACAGCCTTATC
AATGATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAACGAACAATGC
TGCCCCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGAAAAGAGTGA
AGGAATTCGACTTGATCTTTGTGGTATGCTGTTGTCTCCGACCGCGTCTC
AGCTCTTCTGTCTCTGACCGCAAATCGCTCTAGGCCGTCTATCAGTCTCT
CTTACAGCTTGGTTGGATCGACAAACTCCTGGACAACATTTCCACCCTGT
ACATCGATTTGTACAAGGATCAATTACGAAGTACTCGCGCAAGGATAGCA
CAGTACCCCTTTGACAAATACTTTGACCAGCAAGTTCGGGAGCTTGAGGA
TAAGTCGGGGCCTATCTCTTCGGAGGCATTCGTGGCTCATGCGGTCGATA
AGAAAGACCCGCTGGTATCGTCTGACAATGGCGGCCCCCCTCCGCCACCT
GTGCCTGGTCTTCTCAAAGGTATGCATCTAAATGGGCCTTATAAAATGTA
ACGATACTAACATTCCTAAAGCGCAGCATCAAGCTGCGCTAGCCGGGGCG
ACCTCTGATGAGAGTACGCCACCGCACACCCCGGATACATCGCGGTCATC
CACCCCTGTTGCGAACCACATCATAACTGCCAAGGGGGGGCCAGCTGGCC
GAGTTTCACGTCGTGCACGCAAGGCCGCTAACGCCAGCGCCAATGCTTCC
TCAGGCGACGAAAACCGCAAAGGAAAGACACCCAAGAGCGGAAAAAAGAT
GCGCAAGTGGGATGCCGATGGATTTGCCGATGAAGATGATGGTCAGATCC
TCGACTACTCAGCCCATGCTGACGGTGAAGAAGCCGCTGCTCCAGCTGTG
GAAGGCGTGTCGCAAGATTCTTGGGGACGCAGAACTGGCAAGGGCCAGTT
CGTACTGAAAGATTTGGGAGACGAAGTTCACTCGATTTTGGAAAATGCAG
AAAGCGACAAAGCAAAGGATGTGTCCTCTGCTGGTTTCGTCGGTTCAGGT
TTCAATGCCATTGGAGGTCTTCTACGTAATATCGTGGGCGGGAAGACCCT
TACCGAAGCAGATTTGGAGAAGCCCTTGAAGACCATGGAAGATCATTTGT
TGAGGAAGAACGTTGCACGCGAGGCCGCGGTCCGGCTGTGTGAGGGTGTC
CAGCGGGAGCTCGTGGGGAAAAAAACAGGCAATTTCCAAAGTGTGGATGC
TGCTTTGCGCTCGGCCATGGAGTCATCTCTTCGGAAAATACTGACGCCTA
CCTCCTCTCTTGATCTGCTCCGTGAAATCGATGCGGTTACGTCTCCCACT
AGCAAGCAGCAATCTCCTCGTCCTTATGTTATTTCGATCGTTGGTGTCAA
CGGCGTTGGAAAGTCGACGAACTTGGGAAAGATTTGCTATTTTCTACTGC
AGAACAAATACCGTGTTCTCATCGCCGCATGCGATACTTTCCGATCTGGA
GCTGTGGAACAGCTACGTGTTCATGCACGGAACCTCAGGGAACTCAGTGC
CCGCGAGAACGTTGGCGAGGTTGAGCTGTACGAGAAGGGTTACGGAAAGG
ATGCAGCAAACGTGGCGAAGGATGCTGTCGAATACGGAGCTGCCAACCAC
TTCGATGTCGTCCTTATCGATACTGCCGGCCGCCGACACAACGACCAGCG
CCTCATGTCCTCGCTGGAGAAGTTTGCTAAATTTGCTAATCCAGACAAGA
TCTTCATGGTTGGCGAAGCCTTGGTTGGTACGGACAGTGTGATGCAGGCT
CGCAATTTCAACCAGGCCTTCGGTACTGGGCGGAACCTTGACGGCTTCAT
CATCAGCAAATGTGATACAGTTGGTGACATGGTGGGGACGCTGGTCAGCA
TGGTGCATGCTACAGGTATTCCCATTGTCTTCTTGGGAGTTGGTCAGCAT
TATGGTGACCTGAGAGGACTCAGTGTCCCTTGGGCTGTCAATTTGTTGAT
GAAGTGA

Coding sequence (CDS) from alignment at ACJE01000008.1:477717..479773-

>ASPNIDRAFT_210080-T1 ID=ASPNIDRAFT_210080-T1|Name=ASPNIDRAFT_210080-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5751bp|location=Sequence derived from alignment at ACJE01000008.1:477717..479773- (Aspergillus niger ATCC 1015)
CATCAAGCTGCGCTAGCCGGGGCGACCTCTGATGAGAGTACGCCACCGCA
CACCCCGGATACATCGCGGTCATCCACCCCTGTTGCGAACCACATCATAA
CTGCCAAGGGGGGGCCAGCTGGCCGAGTTTCACGTCGTGCACGCAAGGCC
GCTAACGCCAGCGCCAATGCTTCCTCAGGCGACGAAAACCGCAAAGGAAA
GACACCCAAGAGCGGAAAAAAGATGCGCAAGTGGGATGCCGATGGATTTG
CCGATGAAGATGATGGTCAGATCCTCGACTACTCAGCCCATGCTGACGGT
GAAGAAGCCGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAGATTCTTGGGG
ACGCAGAACTGGCAAGGGCCAGTTCGTACTGAAAGATTTGGGAGACGAAG
TTCACTCGATTTTGGAAAATGCAGAAAGCGACAAAGCAAAGGATGTGTCC
TCTGCTGGTTTCGTCGGTTCAGGTTTCAATGCCATTGGAGGTCTTCTACG
TAATATCGTGGGCGGGAAGACCCTTACCGAAGCAGATTTGGAGAAGCCCT
TGAAGACCATGGAAGATCATTTGTTGAGGAAGAACGTTGCACGCGAGGCC
GCGGTCCGGCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAAAAAAC
AGGCAATTTCCAAAGTGTGGATGCTGCTTTGCGCTCGGCCATGGAGTCAT
CTCTTCGGAAAATACTGACGCCTACCTCCTCTCTTGATCTGCTCCGTGAA
ATCGATGCGGTTACGTCTCCCACTAGCAAGCAGCAATCTCCTCGTCCTTA
TGTTATTTCGATCGTTGGTGTCAACGGCGTTGGAAAGTCGACGAACTTGG
GAAAGATTTGCTATTTTCTACTGCAGAACAAATACCGTGTTCTCATCGCC
GCATGCGATACTTTCCGATCTGGAGCTGTGGAACAGCTACGTGTTCATGC
ACGGAACCTCAGGGAACTCAGTGCCCGCGAGAACGTTGGCGAGGTTGAGC
TGTACGAGAAGGGTTACGGAAAGGATGCAGCAAACGTGGCGAAGGATGCT
GTCGAATACGGAGCTGCCAACCACTTCGATGTCGTCCTTATCGATACTGC
CGGCCGCCGACACAACGACCAGCGCCTCATGTCCTCGCTGGAGAAGTTTG
CTAAATTTGCTAATCCAGACAAGATCTTCATGGTTGGCGAAGCCTTGGTT
GGTACGGACAGTGTGATGCAGGCTCGCAATTTCAACCAGGCCTTCGGTAC
TGGGCGGAACCTTGACGGCTTCATCATCAGCAAATGTGATACAGTTGGTG
ACATGGTGGGGACGCTGGTCAGCATGGTGCATGCTACAGGTATTCCCATT
GTCTTCTTGGGAGTTGGTCAGCATTATGGTGACCTGAGAGGACTCAGTGT
CCCTTGGGCTGTCAATTTGTTGATGAAGTGAGCCGTCTATCAGTCTCTCT
TACAGCTTGGTTGGATCGACAAACTCCTGGACAACATTTCCACCCTGTAC
ATCGATTTGTACAAGGATCAATTACGAAGTACTCGCGCAAGGATAGCACA
GTACCCCTTTGACAAATACTTTGACCAGCAAGTTCGGGAGCTTGAGGATA
AGTCGGGGCCTATCTCTTCGGAGGCATTCGTGGCTCATGCGGTCGATAAG
AAAGACCCGCTGGTATCGTCTGACAATGGCGGCCCCCCTCCGCCACCTAT
GTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGGTAGTCCTGTGGTCGA
AATCGTACGCGCCCGTCGGGGCGCATATTGTTAACAGCCTTATCAATGAT
GTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAACGAACAATGCTGCCCC
TTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGAAAAGAGTGAAGGAAT
TCGACTTGATCTTTGTGCATCAAGCTGCGCTAGCCGGGGCGACCTCTGAT
GAGAGTACGCCACCGCACACCCCGGATACATCGCGGTCATCCACCCCTGT
TGCGAACCACATCATAACTGCCAAGGGGGGGCCAGCTGGCCGAGTTTCAC
GTCGTGCACGCAAGGCCGCTAACGCCAGCGCCAATGCTTCCTCAGGCGAC
GAAAACCGCAAAGGAAAGACACCCAAGAGCGGAAAAAAGATGCGCAAGTG
GGATGCCGATGGATTTGCCGATGAAGATGATGGTCAGATCCTCGACTACT
CAGCCCATGCTGACGGTGAAGAAGCCGCTGCTCCAGCTGTGGAAGGCGTG
TCGCAAGATTCTTGGGGACGCAGAACTGGCAAGGGCCAGTTCGTACTGAA
AGATTTGGGAGACGAAGTTCACTCGATTTTGGAAAATGCAGAAAGCGACA
AAGCAAAGGATGTGTCCTCTGCTGGTTTCGTCGGTTCAGGTTTCAATGCC
ATTGGAGGTCTTCTACGTAATATCGTGGGCGGGAAGACCCTTACCGAAGC
AGATTTGGAGAAGCCCTTGAAGACCATGGAAGATCATTTGTTGAGGAAGA
ACGTTGCACGCGAGGCCGCGGTCCGGCTGTGTGAGGGTGTCCAGCGGGAG
CTCGTGGGGAAAAAAACAGGCAATTTCCAAAGTGTGGATGCTGCTTTGCG
CTCGGCCATGGAGTCATCTCTTCGGAAAATACTGACGCCTACCTCCTCTC
TTGATCTGCTCCGTGAAATCGATGCGGTTACGTCTCCCACTAGCAAGCAG
CAATCTCCTCGTCCTTATGTTATTTCGATCGTTGGTGTCAACGGCGTTGG
AAAGTCGACGAACTTGGGAAAGATTTGCTATTTTCTACTGCAGAACAAAT
ACCGTGTTCTCATCGCCGCATGCGATACTTTCCGATCTGGAGCTGTGGAA
CAGCTACGTGTTCATGCACGGAACCTCAGGGAACTCAGTGCCCGCGAGAA
CGTTGGCGAGGTTGAGCTGTACGAGAAGGGTTACGGAAAGGATGCAGCAA
ACGTGGCGAAGGATGCTGTCGAATACGGAGCTGCCAACCACTTCGATGTC
GTCCTTATCGATACTGCCGGCCGCCGACACAACGACCAGCGCCTCATGTC
CTCGCTGGAGAAGTTTGCTAAATTTGCTAATCCAGACAAGATCTTCATGG
TTGGCGAAGCCTTGGTTGGTACGGACAGTGTGATGCAGGCTCGCAATTTC
AACCAGGCCTTCGGTACTGGGCGGAACCTTGACGGCTTCATCATCAGCAA
ATGTGATACAGTTGGTGACATGGTGGGGACGCTGGTCAGCATGGTGCATG
CTACAGGTATTCCCATTGTCTTCTTGGGAGTTGGTCAGCATTATGGTGAC
CTGAGAGGACTCAGTGTCCCTTGGGCTGTCAATTTGTTGATGAAGTGAGC
CGTCTATCAGTCTCTCTTACAGCTTGGTTGGATCGACAAACTCCTGGACA
ACATTTCCACCCTGTACATCGATTTGTACAAGGATCAATTACGAAGTACT
CGCGCAAGGATAGCACAGTACCCCTTTGACAAATACTTTGACCAGCAAGT
TCGGGAGCTTGAGGATAAGTCGGGGCCTATCTCTTCGGAGGCATTCGTGG
CTCATGCGGTCGATAAGAAAGACCCGCTGGTATCGTCTGACAATGGCGGC
CCCCCTCCGCCACCTATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGG
GGTAGTCCTGTGGTCGAAATCGTACGCGCCCGTCGGGGCGCATATTGTTA
ACAGCCTTATCAATGATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCA
ACGAACAATGCTGCCCCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTG
GAAAAGAGTGAAGGAATTCGACTTGATCTTTGTGCATCAAGCTGCGCTAG
CCGGGGCGACCTCTGATGAGAGTACGCCACCGCACACCCCGGATACATCG
CGGTCATCCACCCCTGTTGCGAACCACATCATAACTGCCAAGGGGGGGCC
AGCTGGCCGAGTTTCACGTCGTGCACGCAAGGCCGCTAACGCCAGCGCCA
ATGCTTCCTCAGGCGACGAAAACCGCAAAGGAAAGACACCCAAGAGCGGA
AAAAAGATGCGCAAGTGGGATGCCGATGGATTTGCCGATGAAGATGATGG
TCAGATCCTCGACTACTCAGCCCATGCTGACGGTGAAGAAGCCGCTGCTC
CAGCTGTGGAAGGCGTGTCGCAAGATTCTTGGGGACGCAGAACTGGCAAG
GGCCAGTTCGTACTGAAAGATTTGGGAGACGAAGTTCACTCGATTTTGGA
AAATGCAGAAAGCGACAAAGCAAAGGATGTGTCCTCTGCTGGTTTCGTCG
GTTCAGGTTTCAATGCCATTGGAGGTCTTCTACGTAATATCGTGGGCGGG
AAGACCCTTACCGAAGCAGATTTGGAGAAGCCCTTGAAGACCATGGAAGA
TCATTTGTTGAGGAAGAACGTTGCACGCGAGGCCGCGGTCCGGCTGTGTG
AGGGTGTCCAGCGGGAGCTCGTGGGGAAAAAAACAGGCAATTTCCAAAGT
GTGGATGCTGCTTTGCGCTCGGCCATGGAGTCATCTCTTCGGAAAATACT
GACGCCTACCTCCTCTCTTGATCTGCTCCGTGAAATCGATGCGGTTACGT
CTCCCACTAGCAAGCAGCAATCTCCTCGTCCTTATGTTATTTCGATCGTT
GGTGTCAACGGCGTTGGAAAGTCGACGAACTTGGGAAAGATTTGCTATTT
TCTACTGCAGAACAAATACCGTGTTCTCATCGCCGCATGCGATACTTTCC
GATCTGGAGCTGTGGAACAGCTACGTGTTCATGCACGGAACCTCAGGGAA
CTCAGTGCCCGCGAGAACGTTGGCGAGGTTGAGCTGTACGAGAAGGGTTA
CGGAAAGGATGCAGCAAACGTGGCGAAGGATGCTGTCGAATACGGAGCTG
CCAACCACTTCGATGTCGTCCTTATCGATACTGCCGGCCGCCGACACAAC
GACCAGCGCCTCATGTCCTCGCTGGAGAAGTTTGCTAAATTTGCTAATCC
AGACAAGATCTTCATGGTTGGCGAAGCCTTGGTTGGTACGGACAGTGTGA
TGCAGGCTCGCAATTTCAACCAGGCCTTCGGTACTGGGCGGAACCTTGAC
GGCTTCATCATCAGCAAATGTGATACAGTTGGTGACATGGTGGGGACGCT
GGTCAGCATGGTGCATGCTACAGGTATTCCCATTGTCTTCTTGGGAGTTG
GTCAGCATTATGGTGACCTGAGAGGACTCAGTGTCCCTTGGGCTGTCAAT
TTGTTGATGAAGTGAGCCGTCTATCAGTCTCTCTTACAGCTTGGTTGGAT
CGACAAACTCCTGGACAACATTTCCACCCTGTACATCGATTTGTACAAGG
ATCAATTACGAAGTACTCGCGCAAGGATAGCACAGTACCCCTTTGACAAA
TACTTTGACCAGCAAGTTCGGGAGCTTGAGGATAAGTCGGGGCCTATCTC
TTCGGAGGCATTCGTGGCTCATGCGGTCGATAAGAAAGACCCGCTGGTAT
CGTCTGACAATGGCGGCCCCCCTCCGCCACCTATGTTGGAAGCATTCGAG
ATCTTGACTGCCTCAGGGGTAGTCCTGTGGTCGAAATCGTACGCGCCCGT
CGGGGCGCATATTGTTAACAGCCTTATCAATGATGTCTTCATCGAGGAGA
AGGTCCAGCTTCAGGCAACGAACAATGCTGCCCCTTCGTTCAAGAAAGAG
AAGTACACTCTAAAGTGGAAAAGAGTGAAGGAATTCGACTTGATCTTTGT
G

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005785	signal recognition particle receptor complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport
GO:0006614	SRP-dependent cotranslational protein targeting to membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005047	signal recognition particle binding
GO:0005525	GTP binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ASPNIDRAFT_210080	ASPNIDRAFT_210080	Aspergillus niger ATCC 1015	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ASPNIDRAFT_210080-T1	ASPNIDRAFT_210080-T1-protein	Aspergillus niger ATCC 1015	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ASPNIDRAFT_210080-T1.cds	ASPNIDRAFT_210080-T1.cds	Aspergillus niger ATCC 1015	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ASPNIDRAFT_210080-T1.exon3	ASPNIDRAFT_210080-T1.exon3	Aspergillus niger ATCC 1015	exon
ASPNIDRAFT_210080-T1.exon2	ASPNIDRAFT_210080-T1.exon2	Aspergillus niger ATCC 1015	exon
ASPNIDRAFT_210080-T1.exon1	ASPNIDRAFT_210080-T1.exon1	Aspergillus niger ATCC 1015	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ASPNIDRAFT_210080-T1.utr5p1	ASPNIDRAFT_210080-T1.utr5p1	Aspergillus niger ATCC 1015	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR027417
DBxref	InterPro:IPR011012
DBxref	InterPro:IPR036225
DBxref	InterPro:IPR007222
DBxref	InterPro:IPR042101
DBxref	InterPro:IPR013822
DBxref	InterPro:IPR003593
DBxref	InterPro:IPR000897
DBxref	PFAM:PF02881
DBxref	PFAM:PF00448
DBxref	PFAM:PF04086
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger ATCC 1015 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ACJE01000008.1	supercontig	ACJE01000008.1:477717..479773 -

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ASPNIDRAFT_210080-T1, ASPNIDRAFT_210080-T1 (mRNA) Aspergillus niger ATCC 1015

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ASPNIDRAFT_210080-T1, ASPNIDRAFT_210080-T1 (mRNA) Aspergillus niger ATCC 1015