You are here

Home

ASPNIDRAFT_210168-T1, ASPNIDRAFT_210168-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210168-T1
Unique NameASPNIDRAFT_210168-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:774490..775822+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210168-T1 ID=ASPNIDRAFT_210168-T1|Name=ASPNIDRAFT_210168-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1333bp|location=Sequence derived from alignment at ACJE01000008.1:774490..775822+ (Aspergillus niger ATCC 1015)
CTTCCTCTATCGCTCTTATCCACCACCCATACAGCTACTCACAATTGCGC
CCAATGACTTCACTCTCTGCTAAACGCAAGTCTTCTGAAGACGCGTCCCA
CAATGACGAAGCAAGGACACCTACGAACAGCCCTCCTCGGAAGAAGCTTC
GTATTACCCGCAGACAAAAGCAAGCCCTGATTGACAACCTGCAGCTCGAA
CGTGCGCTCTCTTGATACCTCGCTTACCTGGCAATCCACTAACCAGGCCA
TAGTTACCGAGCGCGCCCGCAAACTTCGCGCACAGTATGCCCTCCAGGCG
AACGATCTTCGGGCACGGATTGAAAGACGTGTCAATCGGATTCCTGTTGC
CCTTCGCAAGGCGACAATGGGCGAGCTGCTGGAGAAACACATGGCCTCTC
TTCGGGCCCAACAGGCGAATCCCTCTCCACGGAAACTTCTCAGCCCGGCC
AAAGCGTCAAGGAGTTTCAGAACCGTTTCTGTGAGCCCCAATGTGCGCAA
GGCCTCTGCTGCGAGCCCTAGCGCCCGCAGAGTCAAGAAGCAAAGGTACG
GCATGAGTGCCTTCAACTTATACGTGCATGTATCGTTGAACAGCGCTGAC
TCGAGCATCCAGCCACGGAGAAATCTATTCCGACAAGGAAAACGCCCCTG
CAGCTGGCGAACAGCTCGATGTCCTCAAGAACCCAAAGAGACGTGGACCT
GGTGCCGCTGCTGGTACTTCGCGTGTTGTGTCCCAAGAGATGAGGGGTGC
AGACTACAGAATCCTATCTCCCAAGACGTCCAATTCCAGAACATATCCGC
ACTCGCCGTTACGCGCCTCACCCGAGAAGCCAACGAACTCTTCCTACCTT
GCAAGACCCATGTCGCCTCTGAAACCCACCAGCCCACTCAAATCAACATC
AGCTAGCATTCCTGCACTGGCAGACAACGCTCGCATTAGGCCAGTCAAAA
ATACCTCTACCTCGATTAAGGACAACCGCCCCCCATCACAGGCTAAGAGA
CCCGCCAGCCGAGCCGCCACAGCCACTAGCAAGACTACGCGCTCACCACT
GCCAAGGCCCGCGACTCGCCAGCTCGAACGCAGAGGCAGTGTGTCATCGT
CCGCATCCTCCGGAACAACCGTTGCCAAGCCAACAAGGACAGGTGCCGGT
GCCCGGAAGGCAACGACAGCATCGACTTCAAGCGCGACCGCGAAGAAGAC
AACAGTCGCCCGGAGCCAAGCAACTTCGGCCACCGCGAAGAGAAACACAA
CTTCGGCCACCAGCAAGAGGGCTCCCACTCCTGCCGGTGGTGAGTCTCCA
ACTGCGGCTCGTAGAGTCCTTCGGAAACGCGCA
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:774490..775822+

>ASPNIDRAFT_210168-T1 ID=ASPNIDRAFT_210168-T1|Name=ASPNIDRAFT_210168-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3480bp|location=Sequence derived from alignment at ACJE01000008.1:774490..775822+ (Aspergillus niger ATCC 1015)
ATGACTTCACTCTCTGCTAAACGCAAGTCTTCTGAAGACGCGTCCCACAA
TGACGAAGCAAGGACACCTACGAACAGCCCTCCTCGGAAGAAGCTTCGTA
TTACCCGCAGACAAAAGCAAGCCCTGATTGACAACCTGCAGCTCGAACTT
ACCGAGCGCGCCCGCAAACTTCGCGCACAGTATGCCCTCCAGGCGAACGA
TCTTCGGGCACGGATTGAAAGACGTGTCAATCGGATTCCTGTTGCCCTTC
GCAAGGCGACAATGGGCGAGCTGCTGGAGAAACACATGGCCTCTCTTCGG
GCCCAACAGGCGAATCCCTCTCCACGGAAACTTCTCAGCCCGGCCAAAGC
GTCAAGGAGTTTCAGAACCGTTTCTGTGAGCCCCAATGTGCGCAAGGCCT
CTGCTGCGAGCCCTAGCGCCCGCAGAGTCAAGAAGCAAAGCCACGGAGAA
ATCTATTCCGACAAGGAAAACGCCCCTGCAGCTGGCGAACAGCTCGATGT
CCTCAAGAACCCAAAGAGACGTGGACCTGGTGCCGCTGCTGGTACTTCGC
GTGTTGTGTCCCAAGAGATGAGGGGTGCAGACTACAGAATCCTATCTCCC
AAGACGTCCAATTCCAGAACATATCCGCACTCGCCGTTACGCGCCTCACC
CGAGAAGCCAACGAACTCTTCCTACCTTGCAAGACCCATGTCGCCTCTGA
AACCCACCAGCCCACTCAAATCAACATCAGCTAGCATTCCTGCACTGGCA
GACAACGCTCGCATTAGGCCAGTCAAAAATACCTCTACCTCGATTAAGGA
CAACCGCCCCCCATCACAGGCTAAGAGACCCGCCAGCCGAGCCGCCACAG
CCACTAGCAAGACTACGCGCTCACCACTGCCAAGGCCCGCGACTCGCCAG
CTCGAACGCAGAGGCAGTGTGTCATCGTCCGCATCCTCCGGAACAACCGT
TGCCAAGCCAACAAGGACAGGTGCCGGTGCCCGGAAGGCAACGACAGCAT
CGACTTCAAGCGCGACCGCGAAGAAGACAACAGTCGCCCGGAGCCAAGCA
ACTTCGGCCACCGCGAAGAGAAACACAACTTCGGCCACCAGCAAGAGGGC
TCCCACTCCTGCCGGTGGTGAGTCTCCAACTGCGGCTCGTAGAGTCCTTC
GGAAACGCGCATGACTTCACTCTCTGCTAAACGCAAGTCTTCTGAAGACG
CGTCCCACAATGACGAAGCAAGGACACCTACGAACAGCCCTCCTCGGAAG
AAGCTTCGTATTACCCGCAGACAAAAGCAAGCCCTGATTGACAACCTGCA
GCTCGAACTTACCGAGCGCGCCCGCAAACTTCGCGCACAGTATGCCCTCC
AGGCGAACGATCTTCGGGCACGGATTGAAAGACGTGTCAATCGGATTCCT
GTTGCCCTTCGCAAGGCGACAATGGGCGAGCTGCTGGAGAAACACATGGC
CTCTCTTCGGGCCCAACAGGCGAATCCCTCTCCACGGAAACTTCTCAGCC
CGGCCAAAGCGTCAAGGAGTTTCAGAACCGTTTCTGTGAGCCCCAATGTG
CGCAAGGCCTCTGCTGCGAGCCCTAGCGCCCGCAGAGTCAAGAAGCAAAG
CCACGGAGAAATCTATTCCGACAAGGAAAACGCCCCTGCAGCTGGCGAAC
AGCTCGATGTCCTCAAGAACCCAAAGAGACGTGGACCTGGTGCCGCTGCT
GGTACTTCGCGTGTTGTGTCCCAAGAGATGAGGGGTGCAGACTACAGAAT
CCTATCTCCCAAGACGTCCAATTCCAGAACATATCCGCACTCGCCGTTAC
GCGCCTCACCCGAGAAGCCAACGAACTCTTCCTACCTTGCAAGACCCATG
TCGCCTCTGAAACCCACCAGCCCACTCAAATCAACATCAGCTAGCATTCC
TGCACTGGCAGACAACGCTCGCATTAGGCCAGTCAAAAATACCTCTACCT
CGATTAAGGACAACCGCCCCCCATCACAGGCTAAGAGACCCGCCAGCCGA
GCCGCCACAGCCACTAGCAAGACTACGCGCTCACCACTGCCAAGGCCCGC
GACTCGCCAGCTCGAACGCAGAGGCAGTGTGTCATCGTCCGCATCCTCCG
GAACAACCGTTGCCAAGCCAACAAGGACAGGTGCCGGTGCCCGGAAGGCA
ACGACAGCATCGACTTCAAGCGCGACCGCGAAGAAGACAACAGTCGCCCG
GAGCCAAGCAACTTCGGCCACCGCGAAGAGAAACACAACTTCGGCCACCA
GCAAGAGGGCTCCCACTCCTGCCGGTGGTGAGTCTCCAACTGCGGCTCGT
AGAGTCCTTCGGAAACGCGCATGACTTCACTCTCTGCTAAACGCAAGTCT
TCTGAAGACGCGTCCCACAATGACGAAGCAAGGACACCTACGAACAGCCC
TCCTCGGAAGAAGCTTCGTATTACCCGCAGACAAAAGCAAGCCCTGATTG
ACAACCTGCAGCTCGAACTTACCGAGCGCGCCCGCAAACTTCGCGCACAG
TATGCCCTCCAGGCGAACGATCTTCGGGCACGGATTGAAAGACGTGTCAA
TCGGATTCCTGTTGCCCTTCGCAAGGCGACAATGGGCGAGCTGCTGGAGA
AACACATGGCCTCTCTTCGGGCCCAACAGGCGAATCCCTCTCCACGGAAA
CTTCTCAGCCCGGCCAAAGCGTCAAGGAGTTTCAGAACCGTTTCTGTGAG
CCCCAATGTGCGCAAGGCCTCTGCTGCGAGCCCTAGCGCCCGCAGAGTCA
AGAAGCAAAGCCACGGAGAAATCTATTCCGACAAGGAAAACGCCCCTGCA
GCTGGCGAACAGCTCGATGTCCTCAAGAACCCAAAGAGACGTGGACCTGG
TGCCGCTGCTGGTACTTCGCGTGTTGTGTCCCAAGAGATGAGGGGTGCAG
ACTACAGAATCCTATCTCCCAAGACGTCCAATTCCAGAACATATCCGCAC
TCGCCGTTACGCGCCTCACCCGAGAAGCCAACGAACTCTTCCTACCTTGC
AAGACCCATGTCGCCTCTGAAACCCACCAGCCCACTCAAATCAACATCAG
CTAGCATTCCTGCACTGGCAGACAACGCTCGCATTAGGCCAGTCAAAAAT
ACCTCTACCTCGATTAAGGACAACCGCCCCCCATCACAGGCTAAGAGACC
CGCCAGCCGAGCCGCCACAGCCACTAGCAAGACTACGCGCTCACCACTGC
CAAGGCCCGCGACTCGCCAGCTCGAACGCAGAGGCAGTGTGTCATCGTCC
GCATCCTCCGGAACAACCGTTGCCAAGCCAACAAGGACAGGTGCCGGTGC
CCGGAAGGCAACGACAGCATCGACTTCAAGCGCGACCGCGAAGAAGACAA
CAGTCGCCCGGAGCCAAGCAACTTCGGCCACCGCGAAGAGAAACACAACT
TCGGCCACCAGCAAGAGGGCTCCCACTCCTGCCGGTGGTGAGTCTCCAAC
TGCGGCTCGTAGAGTCCTTCGGAAACGCGC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210168ASPNIDRAFT_210168Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210168-T1.utr5p1ASPNIDRAFT_210168-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210168-T1.exon1ASPNIDRAFT_210168-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210168-T1.exon2ASPNIDRAFT_210168-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210168-T1.exon3ASPNIDRAFT_210168-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210168-T1.cdsASPNIDRAFT_210168-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210168-T1ASPNIDRAFT_210168-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR018851
DBxrefPFAM:PF10444
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:774490..775822 +
Powered by Drupal