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ASPNIDRAFT_210268-T1, ASPNIDRAFT_210268-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210268-T1
Unique NameASPNIDRAFT_210268-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1363809..1364741-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210268-T1 ID=ASPNIDRAFT_210268-T1|Name=ASPNIDRAFT_210268-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=933bp|location=Sequence derived from alignment at ACJE01000008.1:1363809..1364741- (Aspergillus niger ATCC 1015)
CTCCTCTCCTCTTCGGGGCCCCCGTCGCTTGTTTTCTTGATATCCTTCAG
CACTCAGGTAGTGCCGTAAGCCGGGGTTTCATCATGGGTCTCCTCTATCC
TGCCGGTGTTGTAATCGTGGCCGCAGCGGTGGTCGGACTGTGTAAGGAAA
CCCCATCATTCTGGCGCAGTGGGCTTCATCAAGATACTAATTTGGCTTGT
TTCCATGATTAGACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACGTA
CGCCACAAATCCCTACGACTACGATGAGCAGTGAACACCCGCTAATTCGA
TCTAGATCGGCTACTTCCTCGAGTCGGTGTCTCCGTATGCCTGGGCGAAC
TTTGGGATTGCTATGTGCATTGGCTTATCGGTGGTTGGTGCCGCATGGTA
TGGCTTTACGAGTTCCGCTTGTGTCATTGGGAACGAAATACTGACTTTGT
TCCCATCAGGGGTATCTTCTTGACCGGCTCCTCGATCGTTGGTGGAGGTG
TCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATTATTTTCTGT
GAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTTCTCCTCCAA
GCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCAACTACTACA
CCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCCTGCAACCTG
ATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGCCCTGGCCGA
TGCTGCTGACCCTAGCTTGTTCGTCAGCCCCTTCTCTCGATTAACGGAGT
GAACGCTAACAATATGCACGATAGGTTCGTCAAGATCCTTGTTATCGAAA
TCTTCAGCTCTGTTCTCGGCCTTTTCGGATTGATTGTTGGGCTTCTGGTC
GGAGGAAAGGCACTTGACTTTGGAGCTGCCTGA
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Coding sequence (CDS) from alignment at ACJE01000008.1:1363809..1364741-

>ASPNIDRAFT_210268-T1 ID=ASPNIDRAFT_210268-T1|Name=ASPNIDRAFT_210268-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3015bp|location=Sequence derived from alignment at ACJE01000008.1:1363809..1364741- (Aspergillus niger ATCC 1015)
GTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCCTTT
TCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTTGGA
GCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCGTTGGTGGAGGTG
TCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATTATTTTCTGT
GAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTTCTCCTCCAA
GCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCAACTACTACA
CCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCCTGCAACCTG
ATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGCCCTGGCCGA
TGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTCGGTGTCTCCGTA
TGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTATCGGTGGTTG
GTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACATGGG
TCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGTGGTCGGAC
TGTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCC
TTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTT
GGAGCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCGTTGGTGGAG
GTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATTATTTTC
TGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTTCTCCTC
CAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCAACTACT
ACACCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCCTGCAAC
CTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGCCCTGGC
CGATGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTCGGTGTCTCC
GTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTATCGGTGG
TTGGTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACAT
GGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGTGGTCG
GACTGTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCG
GCCTTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGAC
TTTGGAGCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCGTTGGTG
GAGGTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATTATT
TTCTGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTTCTC
CTCCAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCAACT
ACTACACCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCCTGC
AACCTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGCCCT
GGCCGATGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTCGGTGTC
TCCGTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTATCGG
TGGTTGGTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACAGATTAA
CATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGTGG
TCGGACTGTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTC
TCGGCCTTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTT
GACTTTGGAGCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCGTTG
GTGGAGGTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATT
ATTTTCTGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTT
CTCCTCCAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCA
ACTACTACACCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCC
TGCAACCTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGC
CCTGGCCGATGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTCGGT
GTCTCCGTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTAT
CGGTGGTTGGTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACAGAT
TAACATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGG
TGGTCGGACTGTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTG
TTCTCGGCCTTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCA
CTTGACTTTGGAGCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCG
TTGGTGGAGGTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCG
ATTATTTTCTGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGT
CTTCTCCTCCAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCA
GCAACTACTACACCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGC
GCCTGCAACCTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGC
GGCCCTGGCCGATGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTC
GGTGTCTCCGTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCT
TATCGGTGGTTGGTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACA
GATTAACATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAG
CGGTGGTCGGACTGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA16ASPNIDRAFT_210268Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210268-T1ASPNIDRAFT_210268-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210268-T1.cdsASPNIDRAFT_210268-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210268-T1.exon5ASPNIDRAFT_210268-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210268-T1.exon4ASPNIDRAFT_210268-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210268-T1.exon3ASPNIDRAFT_210268-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210268-T1.exon2ASPNIDRAFT_210268-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210268-T1.exon1ASPNIDRAFT_210268-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210268-T1.utr5p1ASPNIDRAFT_210268-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265G5C
DBxrefInterPro:IPR035921
DBxrefInterPro:IPR002379
DBxrefInterPro:IPR000245
DBxrefPFAM:PF00137
ProductH( )-transporting V0 sector ATPase subunit c''
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1363809..1364741 -
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