You are here

ASPNIDRAFT_210295-T1, ASPNIDRAFT_210295-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210295-T1
Unique NameASPNIDRAFT_210295-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1449623..1450704-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210295-T1 ID=ASPNIDRAFT_210295-T1|Name=ASPNIDRAFT_210295-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1082bp|location=Sequence derived from alignment at ACJE01000008.1:1449623..1450704- (Aspergillus niger ATCC 1015)
ATGCCAAACCCTTCGCAACTCCTGCTTCTTGCCGACCATATCAAGTTATC GCTACTCGAACGGCAACGGGCCATCTCGCTCGACCTAGAACCCAACAGTC AAGATGGCGAGATCTCACGCTCCCTCGACTCCTTGAAAGAGGGCATCGAC GCCGTGGAATCCGACTGCGCACGGCTAGAAGAAGCCAACGATGAAAGCGC CACCGACATGAGAGACCAACTCGACCACCTATACTCCCAGTATCGAGAAC TGACATCCCAATTCCGCGGCTCGGATGCTGCTGCAGCGGACGATCCCGTC GAGTTCACCAACATCAAGAAGTCATCACCGGACCTGAAACAGCCCGTCCC GCAACATCCTTCCTCCAAATCAGTCCGGTTTATGGATAACGCCGCCGAAG AGGACGATCTCAATCGCCGGAATCTCTTCCAGCCATACCGCGACTCGCCC TCCCCACAGGGCGTGGACACATCCGAAATGTCCAACCAGCAGGTCTACGA TCATCATGAGCAGATCATGCGCGACCAAGACGAGCAGCTAGACCGACTAG GCGAATCCATCGGACGACAACATCAACTCAGTATCCAGATTGGTGATGAA CTTGAGGGCCATGTTGCGTTGCTCGATGACATGGATGGCCATGTGGAACG GCATCAGGGTCGGTTAGACAAGGCCAAACGCCGGCTGGATAAATTTCGGC GAAGTGCGAGCGAGAATTGGAGCATGATGACAATCATCGGGTTGATCATC GTCCTCGTCATACTGATCGTCCTTCTCAAGTGAATGGGTGTGGAACCTCT CGTATATGATACTTCTCGTCATGACTTTGTTGTTGGAGCGGGATTACTCC ATTGATGATCCCCGGGGCGAAATGGCGTTATTTGCGTTGTATTGGAGTTT TCCATACTACTAAGCTATCGAGTTTCTGTTGTGGAGGATGGAAGGGTTTC TGTGGCGTTAGAGTAGGTATTTGCTTGCGGCTTAACACTTTTACAGCCCA TCGGCATCTGTTTCGAATACACTATATATCATTCCTTTGATTACTTTATA GCAGAGCCAAATACATCTCTCCTGCTTTTGAT
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:1449623..1450704-

>ASPNIDRAFT_210295-T1 ID=ASPNIDRAFT_210295-T1|Name=ASPNIDRAFT_210295-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=783bp|location=Sequence derived from alignment at ACJE01000008.1:1449623..1450704- (Aspergillus niger ATCC 1015)
ATGCCAAACCCTTCGCAACTCCTGCTTCTTGCCGACCATATCAAGTTATC
GCTACTCGAACGGCAACGGGCCATCTCGCTCGACCTAGAACCCAACAGTC
AAGATGGCGAGATCTCACGCTCCCTCGACTCCTTGAAAGAGGGCATCGAC
GCCGTGGAATCCGACTGCGCACGGCTAGAAGAAGCCAACGATGAAAGCGC
CACCGACATGAGAGACCAACTCGACCACCTATACTCCCAGTATCGAGAAC
TGACATCCCAATTCCGCGGCTCGGATGCTGCTGCAGCGGACGATCCCGTC
GAGTTCACCAACATCAAGAAGTCATCACCGGACCTGAAACAGCCCGTCCC
GCAACATCCTTCCTCCAAATCAGTCCGGTTTATGGATAACGCCGCCGAAG
AGGACGATCTCAATCGCCGGAATCTCTTCCAGCCATACCGCGACTCGCCC
TCCCCACAGGGCGTGGACACATCCGAAATGTCCAACCAGCAGGTCTACGA
TCATCATGAGCAGATCATGCGCGACCAAGACGAGCAGCTAGACCGACTAG
GCGAATCCATCGGACGACAACATCAACTCAGTATCCAGATTGGTGATGAA
CTTGAGGGCCATGTTGCGTTGCTCGATGACATGGATGGCCATGTGGAACG
GCATCAGGGTCGGTTAGACAAGGCCAAACGCCGGCTGGATAAATTTCGGC
GAAGTGCGAGCGAGAATTGGAGCATGATGACAATCATCGGGTTGATCATC
GTCCTCGTCATACTGATCGTCCTTCTCAAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210295ASPNIDRAFT_210295Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210295-T1.cdsASPNIDRAFT_210295-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210295-T1.utr3p1ASPNIDRAFT_210295-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210295-T1.exon1ASPNIDRAFT_210295-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210295-T1ASPNIDRAFT_210295-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000727
DBxrefPFAM:PF05739
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1449623..1450704 -