You are here

Home

ASPNIDRAFT_210529-T1, ASPNIDRAFT_210529-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210529-T1
Unique NameASPNIDRAFT_210529-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1324372..1325510-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210529-T1 ID=ASPNIDRAFT_210529-T1|Name=ASPNIDRAFT_210529-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1139bp|location=Sequence derived from alignment at ACJE01000013.1:1324372..1325510- (Aspergillus niger ATCC 1015)
ATGGACCTCTCCAATCCGCGATGCGAGCATCTGGCCTCGCCTGATATCAA
AAACTTCATCCTCTCCATGTACGTCTTTTACTCTAACCATTATGTATCCT
ACATTATACCGAAGCTAACTGTAATCAGCCTCATCGTCTTCGGAATCCTC
CTTTCCTACACCCCCCAACATGTCCGCATTCTCACCATGAAGACCTCCTT
CGGCATCTCACCGTACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGG
CACTAGCAAACGTGATCTCCCAACAACAAAGCCTTCACGACATGGCCTGC
TGCAAGCAAGTCAATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCT
TCAAGTCGGAACCCAATGCCTTTGCTTCTTCATCATGTAAGAACCCCATC
ATCGTCGTCAAACCATCCCATCCTAAACTAGCCACCAACTAACCCATCCA
GCCTATTCCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCC
AAATCCAGCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCAT
CCTTCACGCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTC
GCCCCTCTTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCC
CTCCTCGCCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACT
CCGCTGCGTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCG
GCAGTCTCGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGG
TGGAGTACATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCT
GCTCTGCTTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATA
GTCATGAAGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGG
GAAGAGGAGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGAC
GCCTTTGTTGAGGGATCAGTGAGATCTTCTTTGTATGGTTGGATTTTGGC
TTTTGGAAAGTCTGGTATGTGGTCGAGTGGTTTGGAGATGCAAAAGCGCA
AAACTGTACTTCTTGTCCCGTTCTATTCAAGATGCCATG
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:1324372..1325510-

>ASPNIDRAFT_210529-T1 ID=ASPNIDRAFT_210529-T1|Name=ASPNIDRAFT_210529-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2691bp|location=Sequence derived from alignment at ACJE01000013.1:1324372..1325510- (Aspergillus niger ATCC 1015)
CCTATTCCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCCA
AATCCAGCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCATC
CTTCACGCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTCG
CCCCTCTTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCCC
TCCTCGCCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACTC
CGCTGCGTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCGG
CAGTCTCGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGGT
GGAGTACATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCTG
CTCTGCTTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATAG
TCATGAAGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGGG
AAGAGGAGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGACG
CCTTTGTTGAGGGATCAGTGACCTCATCGTCTTCGGAATCCTCCTTTCCT
ACACCCCCCAACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATC
TCACCGTACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGC
AAACGTGATCTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGC
AAGTCAATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTC
GGAACCCAATGCCTTTGCTTCTTCATCATATGGACCTCTCCAATCCGCGA
TGCGAGCATCTGGCCTCGCCTGATATCAAAAACTTCATCCTCTCCATCCT
ATTCCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCCAAAT
CCAGCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCATCCTT
CACGCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTCGCCC
CTCTTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCCCTCC
TCGCCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACTCCGC
TGCGTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCGGCAG
TCTCGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGGTGGA
GTACATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCTGCTC
TGCTTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATAGTCA
TGAAGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGGGAAG
AGGAGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGACGCCT
TTGTTGAGGGATCAGTGACCTCATCGTCTTCGGAATCCTCCTTTCCTACA
CCCCCCAACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATCTCA
CCGTACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGCAAA
CGTGATCTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGCAAG
TCAATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTCGGA
ACCCAATGCCTTTGCTTCTTCATCATATGGACCTCTCCAATCCGCGATGC
GAGCATCTGGCCTCGCCTGATATCAAAAACTTCATCCTCTCCATCCTATT
CCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCCAAATCCA
GCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCATCCTTCAC
GCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTCGCCCCTC
TTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCCCTCCTCG
CCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACTCCGCTGC
GTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCGGCAGTCT
CGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGGTGGAGTA
CATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCTGCTCTGC
TTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATAGTCATGA
AGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGGGAAGAGG
AGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGACGCCTTTG
TTGAGGGATCAGTGACCTCATCGTCTTCGGAATCCTCCTTTCCTACACCC
CCCAACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATCTCACCG
TACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGCAAACGT
GATCTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGCAAGTCA
ATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTCGGAACC
CAATGCCTTTGCTTCTTCATCATATGGACCTCTCCAATCCGCGATGCGAG
CATCTGGCCTCGCCTGATATCAAAAACTTCATCCTCTCCAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210529ASPNIDRAFT_210529Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210529-T1ASPNIDRAFT_210529-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210529-T1.cdsASPNIDRAFT_210529-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210529-T1.utr3p1ASPNIDRAFT_210529-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210529-T1.exon3ASPNIDRAFT_210529-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210529-T1.exon2ASPNIDRAFT_210529-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210529-T1.exon1ASPNIDRAFT_210529-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR006603
DBxrefPFAM:PF04193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1324372..1325510 -
Powered by Drupal