You are here

Home

ASPNIDRAFT_210783-T1, ASPNIDRAFT_210783-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210783-T1
Unique NameASPNIDRAFT_210783-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:191962..193018+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210783-T1 ID=ASPNIDRAFT_210783-T1|Name=ASPNIDRAFT_210783-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1057bp|location=Sequence derived from alignment at ACJE01000013.1:191962..193018+ (Aspergillus niger ATCC 1015)
ATGGATAGTTGTGATTTAGTTGCAGTTGGGGTAAGCCTAACTAGTTAAGT
AGCTACTACTTATTAATGATTGATTTCTCCCACCCACCATTCCACTACCC
CGCAGTTCCCTCTCTCCGACATCAACCAACAACTTCCCCATCCCTTGATT
CCCTTCCATACCCTCCCACCCGCACTATTAACCATGGCTCTCAAACCCGG
CGATTCCTTCCCTTCGGATGTTGTCTTCCAGTGCGTTTAATAATGTATAA
GTAATCTCAATATATATCTAACAAACAGCCAGGTACATTCCCTGGAGCGA
AGACAAGGGCGAGATCACCGCATGCGGCATCCCTATTAACTACAACGCCT
CGAAAGAATGGGCCGATAAGAAGGTTGTTCTATTCTCCGTGCCTGGTATG
GTCCCACCCCAATCTACTGCTTAATATAATTTCCCGACCAACAGAATATT
TGTGATAGGTGCCTTCACCCCCACCTGCTCCATCAACCATGTCCCCGGCT
ACATCCAGAACCTTCCTCAGCTGAAGGAGAAGGGCGTGCAAGTCGTTGCC
GTGATCGCGTCCAATGATCCTTTTGTCATGAGCGCTTGGGGAAAGGCGAA
TAATGTCAAAGGTGATGATATTGTGAGTCTTGAAGCCCTCTTGGTATTTA
CTTTTGTTGTACTCCTGTTCCTTGGCTTATGGTATTTCGATGATAGCTTT
TCTTGACTGATCCTGATGCGCGCTTCTCGAACAACCTTGGCTGGGCGAGT
GGTGGTCGCACCGGGCGGTTTGCCATTGTCATTGATCATGGCAAGGTGAC
CTATGCGCAGATTGAGACTGAGAAGGGTGCTGTTAAGGTATGTTCCTCCT
TTATCTTTCCGCCTTGTTAGGTGTTGGGAAGTGTATACTGATAGATGTAG
GTCTCGGGCGCTGATGCTATCCTGGCGAATTTGTGAATGTTGAGCGTTCA
CTAGATGGGATGCAGTAGAATCACCATGGTTGCCATTTGTTATGTTCCTT
CTTAGCGAGTGAGCAAGATACAAATAGCTAGTCACGAATCTCAAAGCCTT
CGAAGAT
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:191962..193018+

>ASPNIDRAFT_210783-T1 ID=ASPNIDRAFT_210783-T1|Name=ASPNIDRAFT_210783-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2505bp|location=Sequence derived from alignment at ACJE01000013.1:191962..193018+ (Aspergillus niger ATCC 1015)
ATGGCTCTCAAACCCGGCGATTCCTTCCCTTCGGATGTTGTCTTCCAGTA
CATTCCCTGGAGCGAAGACAAGGGCGAGATCACCGCATGCGGCATCCCTA
TTAACTACAACGCCTCGAAAGAATGGGCCGATAAGAAGGTTGTTCTATTC
TCCGTGCCTGGTGCCTTCACCCCCACCTGCTCCATCAACCATGTCCCCGG
CTACATCCAGAACCTTCCTCAGCTGAAGGAGAAGGGCGTGCAAGTCGTTG
CCGTGATCGCGTCCAATGATCCTTTTGTCATGAGCGCTTGGGGAAAGGCG
AATAATGTCAAAGGTGATGATATTCTTTTCTTGACTGATCCTGATGCGCG
CTTCTCGAACAACCTTGGCTGGGCGAGTGGTGGTCGCACCGGGCGGTTTG
CCATTGTCATTGATCATGGCAAGGTGACCTATGCGCAGATTGAGACTGAG
AAGGGTGCTGTTAAGGTCTCGGGCGCTGATGCTATCCTGGCGAATTTGTG
AATGGCTCTCAAACCCGGCGATTCCTTCCCTTCGGATGTTGTCTTCCAGT
ACATTCCCTGGAGCGAAGACAAGGGCGAGATCACCGCATGCGGCATCCCT
ATTAACTACAACGCCTCGAAAGAATGGGCCGATAAGAAGGTTGTTCTATT
CTCCGTGCCTGGTGCCTTCACCCCCACCTGCTCCATCAACCATGTCCCCG
GCTACATCCAGAACCTTCCTCAGCTGAAGGAGAAGGGCGTGCAAGTCGTT
GCCGTGATCGCGTCCAATGATCCTTTTGTCATGAGCGCTTGGGGAAAGGC
GAATAATGTCAAAGGTGATGATATTCTTTTCTTGACTGATCCTGATGCGC
GCTTCTCGAACAACCTTGGCTGGGCGAGTGGTGGTCGCACCGGGCGGTTT
GCCATTGTCATTGATCATGGCAAGGTGACCTATGCGCAGATTGAGACTGA
GAAGGGTGCTGTTAAGGTCTCGGGCGCTGATGCTATCCTGGCGAATTTGT
GAATGGCTCTCAAACCCGGCGATTCCTTCCCTTCGGATGTTGTCTTCCAG
TACATTCCCTGGAGCGAAGACAAGGGCGAGATCACCGCATGCGGCATCCC
TATTAACTACAACGCCTCGAAAGAATGGGCCGATAAGAAGGTTGTTCTAT
TCTCCGTGCCTGGTGCCTTCACCCCCACCTGCTCCATCAACCATGTCCCC
GGCTACATCCAGAACCTTCCTCAGCTGAAGGAGAAGGGCGTGCAAGTCGT
TGCCGTGATCGCGTCCAATGATCCTTTTGTCATGAGCGCTTGGGGAAAGG
CGAATAATGTCAAAGGTGATGATATTCTTTTCTTGACTGATCCTGATGCG
CGCTTCTCGAACAACCTTGGCTGGGCGAGTGGTGGTCGCACCGGGCGGTT
TGCCATTGTCATTGATCATGGCAAGGTGACCTATGCGCAGATTGAGACTG
AGAAGGGTGCTGTTAAGGTCTCGGGCGCTGATGCTATCCTGGCGAATTTG
TGAATGGCTCTCAAACCCGGCGATTCCTTCCCTTCGGATGTTGTCTTCCA
GTACATTCCCTGGAGCGAAGACAAGGGCGAGATCACCGCATGCGGCATCC
CTATTAACTACAACGCCTCGAAAGAATGGGCCGATAAGAAGGTTGTTCTA
TTCTCCGTGCCTGGTGCCTTCACCCCCACCTGCTCCATCAACCATGTCCC
CGGCTACATCCAGAACCTTCCTCAGCTGAAGGAGAAGGGCGTGCAAGTCG
TTGCCGTGATCGCGTCCAATGATCCTTTTGTCATGAGCGCTTGGGGAAAG
GCGAATAATGTCAAAGGTGATGATATTCTTTTCTTGACTGATCCTGATGC
GCGCTTCTCGAACAACCTTGGCTGGGCGAGTGGTGGTCGCACCGGGCGGT
TTGCCATTGTCATTGATCATGGCAAGGTGACCTATGCGCAGATTGAGACT
GAGAAGGGTGCTGTTAAGGTCTCGGGCGCTGATGCTATCCTGGCGAATTT
GTGAATGGCTCTCAAACCCGGCGATTCCTTCCCTTCGGATGTTGTCTTCC
AGTACATTCCCTGGAGCGAAGACAAGGGCGAGATCACCGCATGCGGCATC
CCTATTAACTACAACGCCTCGAAAGAATGGGCCGATAAGAAGGTTGTTCT
ATTCTCCGTGCCTGGTGCCTTCACCCCCACCTGCTCCATCAACCATGTCC
CCGGCTACATCCAGAACCTTCCTCAGCTGAAGGAGAAGGGCGTGCAAGTC
GTTGCCGTGATCGCGTCCAATGATCCTTTTGTCATGAGCGCTTGGGGAAA
GGCGAATAATGTCAAAGGTGATGATATTCTTTTCTTGACTGATCCTGATG
CGCGCTTCTCGAACAACCTTGGCTGGGCGAGTGGTGGTCGCACCGGGCGG
TTTGCCATTGTCATTGATCATGGCAAGGTGACCTATGCGCAGATTGAGAC
TGAGAAGGGTGCTGTTAAGGTCTCGGGCGCTGATGCTATCCTGGCGAATT
TGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPF3_2ASPNIDRAFT_210783Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210783-T1ASPNIDRAFT_210783-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210783-T1.utr5p1ASPNIDRAFT_210783-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210783-T1.exon1ASPNIDRAFT_210783-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210783-T1.exon2ASPNIDRAFT_210783-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210783-T1.exon3ASPNIDRAFT_210783-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210783-T1.exon4ASPNIDRAFT_210783-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210783-T1.exon5ASPNIDRAFT_210783-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210783-T1.cdsASPNIDRAFT_210783-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210783-T1.utr3p1ASPNIDRAFT_210783-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR037944
DBxrefInterPro:IPR013766
DBxrefInterPro:IPR013740
DBxrefPFAM:PF08534
DBxrefPFAM:PF00578
ProductPeroxiredoxin Asp f3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:191962..193018 +
Powered by Drupal