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ASPNIDRAFT_210968-T1, ASPNIDRAFT_210968-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210968-T1
Unique NameASPNIDRAFT_210968-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:414974..416084-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210968-T1 ID=ASPNIDRAFT_210968-T1|Name=ASPNIDRAFT_210968-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1111bp|location=Sequence derived from alignment at ACJE01000002.1:414974..416084- (Aspergillus niger ATCC 1015)
TTCAGATGCTCAAGGAAGACCATGGCGCAGAATGCAAGATTGTAGGCAAC
CCTATCCTCAATCACACAAACATATGACACTAACAGATACCCAGTGCACG
CGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCGCCAGAA
GCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCTGTCAAT
GCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGTGATGCT
GCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCGCGAATA
CTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCGCGGTGG
AGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGGAGACTC
GCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGCCGCACC
CCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGGTTGTAC
ACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAAAGCAGG
AGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGGTGGTCG
TGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGGCAGAAG
ATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTTACTGGT
GTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCACACAGTT
TGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTGCATTCG
TCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAGTGCCAG
GGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGGTAAGCC
CAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATGCGCGGG
AAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAGAAGGCC
ATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACGGAGTTA
TGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCAGTTTGT
CTGGTGATTGA
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Coding sequence (CDS) from alignment at ACJE01000002.1:414974..416084-

>ASPNIDRAFT_210968-T1 ID=ASPNIDRAFT_210968-T1|Name=ASPNIDRAFT_210968-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2106bp|location=Sequence derived from alignment at ACJE01000002.1:414974..416084- (Aspergillus niger ATCC 1015)
TGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCG
CCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCT
GTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGT
GATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCG
CGAATACTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTGGCG
CGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGG
AGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGC
CGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGG
TTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAA
AGCAGGAGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCGTGG
TGGTCGTGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGG
CAGAAGATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTTGTT
ACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCAC
ACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTG
CATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAG
TGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGG
TAAGCCCAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGAATG
CGCGGGAAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGAAAG
AAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACG
GAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCA
GTTTGTCTGGTGATTGAATGCTCAAGGAAGACCATGGCGCAGAATGCAAG
ATTTGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGC
GCGCCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACT
GCTGTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTT
CGTGATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAA
CCGCGAATACTACGCACAAGGTCACGAGAAGGAGATCGAAGAGGGGCGTG
GCGCGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTT
CGGAGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGA
GGCCGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCAC
CGGTTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGC
GAAAGCAGGAGGGGAACGCCACTTCCGGGTAGAGGACGAGGAGGTATGCG
TGGTGGTCGTGGTGGCCGACCATTCCCTAGCGCCGCTCAGGTCCCCCCAT
CGGCAGAAGATATCCTACCGCCCGCGGACCCGAATATCACATCGCTCTTT
GTTACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTT
CACACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACT
CTGCATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAG
CAGTGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTG
GGGTAAGCCCAAGCCGTTGGATAACATGGATCGGGAGGAACGCTTGAAGA
ATGCGCGGGAAGGTCGGCAGGCGGCAGGCCCGCGGGGAGCCGATTCTGGA
AAGAAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACA
ACGGAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACT
CCAGTTTGTCTGGTGATTGAATGCTCAAGGAAGACCATGGCGCAGAATGC
AAGATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SLT11ASPNIDRAFT_210968Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210968-T1ASPNIDRAFT_210968-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210968-T1.cdsASPNIDRAFT_210968-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210968-T1.exon2ASPNIDRAFT_210968-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210968-T1.exon1ASPNIDRAFT_210968-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210968-T1.utr5p1ASPNIDRAFT_210968-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263BDA
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034356
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductPre-mRNA-splicing factor slt11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:414974..416084 -
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