You are here

Home

ASPNIDRAFT_211053-T1, ASPNIDRAFT_211053-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_211053-T1
Unique NameASPNIDRAFT_211053-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:697336..698497-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_211053-T1 ID=ASPNIDRAFT_211053-T1|Name=ASPNIDRAFT_211053-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1162bp|location=Sequence derived from alignment at ACJE01000002.1:697336..698497- (Aspergillus niger ATCC 1015)
CTCTTATTCCTTTCGAATTTCCCTTGATTGCCGCTCCTCCGCTCTAACGC
CCAACATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCACCGCCATG
GGCCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCGTATTC
AGTGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTG
TATATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGG
ACCTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGT
TACATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGG
TGGAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGAT
CTTTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGCGACTATGA
ACTGATGATTTGGTATGTGAGCTCTCAAAGGATCAAAGAATACAGAAATC
TAACAACGCCAGGCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGC
AAATTGCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGC
AGCACCACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCAGA
AAGCCCTATCAACTCATACAGTGGGGACATCAATGCATTTTTCAGCTATC
TCACTCAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAGTAAG
ATTCCCTGATTCTACCAGCGGACGCCGCAGCGAAACAGTCACTAACAGAA
GTGATGTGTAGATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGG
CAACCTTCACGGTTGACAACTGGACCGCCAGTGTCAACTAGGGTTCTAGA
AGTAGCCTTTGAGGCAGAATCTGGGTAAATTGACTCCAGCTCGGGAGAAT
GATAGCTTGTTTCTTCGTTCTGGAACGTTGGGCGTGTGAGAGCTAAAAAG
TCGTACCCACTCTGATTGGAAAGACTTATTCAACATTGGTCCTTCCCTTC
TGTTGGGCAAGGCATAGTTAGTGATTAGACAAGTCAAGGTCATGGTGGAT
CCCTTGTAATCTTAGCCAGCCTTTTCCTATAATGGTAACCCACCCGTAGG
GGGATGATCATT
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:697336..698497-

>ASPNIDRAFT_211053-T1 ID=ASPNIDRAFT_211053-T1|Name=ASPNIDRAFT_211053-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2160bp|location=Sequence derived from alignment at ACJE01000002.1:697336..698497- (Aspergillus niger ATCC 1015)
ATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACG
GTTGACAACTGGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACA
TCCAGCCCATTGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCC
TGGGAGGTGTGGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGAC
ATACAGCTTCGTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCA
ATGCATTTTTCAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCT
CAGTACTTGATCAATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCA
CCGCCATGGGCCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCC
CCGTATTCAGTGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAG
CCAGTGTGTATATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACA
CCGAATGGACCTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAAC
TCTGGCGTTACATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCC
CACCTCGGTGGAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCG
CGTATGATCTTTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGC
GACTATGAACTGATGATTTGATCTGCAGTTTGGAACTGAGGCGTTCACCG
GGGGCCCGGCAACCTTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG
GCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATTGCCACGG
CCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCACCACCCAG
GCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCAGAAAGCCCTATCAA
CTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTCACTCAGAACC
AAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAATGAAGCTCCCCGTGTC
ACTTGCTATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCTCTCAAT
ATGACAGTGCCTCGAGCCCCCCGTATTCAGTGAACCAGAACCTCTGGGGC
GAGTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACTCTCCAG
CAGTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTGAGGGAA
CAGTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAGCTCGTG
AGTGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGACAACAC
CAACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGAATGTGG
ACCATGCCACTTCTAGCGGCGACTATGAACTGATGATTTGATCTGCAGTT
TGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACGGTTGACAACT
GGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACATCCAGCCCAT
TGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGT
GGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTC
GTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCAATGCATTTTT
CAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGA
TCAATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCACCGCCATGGG
CCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCGTATTCAG
TGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTA
TATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGAC
CTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTA
CATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTG
GAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCT
TTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGCGACTATGAAC
TGATGATTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008810cellulase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211053ASPNIDRAFT_211053Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211053-T1ASPNIDRAFT_211053-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211053-T1.cdsASPNIDRAFT_211053-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211053-T1.utr3p1ASPNIDRAFT_211053-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211053-T1.exon3ASPNIDRAFT_211053-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211053-T1.exon2ASPNIDRAFT_211053-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211053-T1.exon1ASPNIDRAFT_211053-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211053-T1.utr5p1ASPNIDRAFT_211053-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR002594
DBxrefInterPro:IPR013319
DBxrefPFAM:PF01670
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:697336..698497 -
Powered by Drupal