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ASPNIDRAFT_211390-T1, ASPNIDRAFT_211390-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_211390-T1
Unique NameASPNIDRAFT_211390-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1457741..1458865+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_211390-T1 ID=ASPNIDRAFT_211390-T1|Name=ASPNIDRAFT_211390-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1125bp|location=Sequence derived from alignment at ACJE01000006.1:1457741..1458865+ (Aspergillus niger ATCC 1015)
CTCATCATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTCCTAC
TCAGGACGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAACCGCG
GCACCAAGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGATGAC
AAGCCCGGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGGATAA
GTCGCGTCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATGAAGA
AGGTGCGTGCTGTCGCGTCTCTGCAGCCTCATCTCTCCCCTTCGTTATCG
CCGTCAATTCTGTCGCCAACTCTAGTCTTTTCATGATGCGTCTTTTCTCG
TCGTTGTCAAGCTTGTTTTGCACGTTGTCTGCCTGGAACTATTGCCGTTG
GATCGGTGCTGACGCCTCAATGCGGTCGCAAAACAGGCCTACGAACTCTC
CGTTCTCACAGGTACCCAAGTACTCCTCCTGGTGGTGTCCGAGACCGGTC
TCGTCTATACTTTCACCACCCCGAAGCTTCAACCGCTGGTGACCAAGGCT
GAGGGCAAGAACCTCATTCAGGTGAGTGCTGTGCCACTGCTTCCTCTCGT
CTACGCGAGTCGAACTCAACGCGACTGACTCCCTCCGTTTCCCATGTACA
GGCCTGCCTGAATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATG
CGCCCGAGGTGCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTC
AACCCTCAACAGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTA
CATGACGAACGAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGC
AGCAACAGCAGGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGG
ATGCCACCTCAGCACCAGCCCACGGCGTAAGCGGTGGCTATGTGTCTTCA
TGCCCCGCGTTTTCAAGCACCTGAGGGGCCCAGACAGTTGTTCGCATCCT
TGTCAACTCCAGCGCGTGCAGCTTTCCTCTACGGCCTTCCTTTGATACCC
AACGATTTGTTTCCAGACATAATTCATACTATTAAAACCGGTCTACAGTG
TTGTACCGCCGCGCAACTCAGAACG
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Coding sequence (CDS) from alignment at ACJE01000006.1:1457741..1458865+

>ASPNIDRAFT_211390-T1 ID=ASPNIDRAFT_211390-T1|Name=ASPNIDRAFT_211390-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1980bp|location=Sequence derived from alignment at ACJE01000006.1:1457741..1458865+ (Aspergillus niger ATCC 1015)
ATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTCCTACTCAGGA
CGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAACCGCGGCACCA
AGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGATGACAAGCCC
GGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGGATAAGTCGCG
TCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATGAAGAAGGCCT
ACGAACTCTCCGTTCTCACAGGTACCCAAGTACTCCTCCTGGTGGTGTCC
GAGACCGGTCTCGTCTATACTTTCACCACCCCGAAGCTTCAACCGCTGGT
GACCAAGGCTGAGGGCAAGAACCTCATTCAGGCCTGCCTGAATGCACCTG
ATCCCACTACCAATGAGAATGGCGTTGATGCGCCCGAGGTGCCGGCTGAG
ACGCCAGAGGATGTCAGCCACAGCAATGTCAACCCTCAACAGTCGAATAT
CCCCCGTCCCGCCGGTATGCACCCCGGCTACATGACGAACGAACAACAGC
AGCAGATGGCCTACTACCAGGGCCTTCAGCAGCAACAGCAGGCAGGAGGA
CAGTATCCTGGCATGCCTGTGGGTAACCGGATGCCACCTCAGCACCAGCC
CACGGCGTAAATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTC
CTACTCAGGACGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAAC
CGCGGCACCAAGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGA
TGACAAGCCCGGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGG
ATAAGTCGCGTCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATG
AAGAAGGCCTACGAACTCTCCGTTCTCACAGGTACCCAAGTACTCCTCCT
GGTGGTGTCCGAGACCGGTCTCGTCTATACTTTCACCACCCCGAAGCTTC
AACCGCTGGTGACCAAGGCTGAGGGCAAGAACCTCATTCAGGCCTGCCTG
AATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATGCGCCCGAGGT
GCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTCAACCCTCAAC
AGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTACATGACGAAC
GAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGCAGCAACAGCA
GGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGGATGCCACCTC
AGCACCAGCCCACGGCGTAAATGGCCGACATCACTGCCGTCGGTGAGGAG
AACCCTTCTCCTACTCAGGACGACCTGCAGCAGGCCGCCGGTAACGGCGC
CGCTGACAACCGCGGCACCAAGCGCTCTCGCATGAGCGCCGACGACGACG
ACGATGATGATGACAAGCCCGGTCGCGAGCGCAGAAAGATTGAGATCAAA
TTCATTCAGGATAAGTCGCGTCGCCACATCACCTTCTCCAAGCGGAAGGC
GGGTATCATGAAGAAGGCCTACGAACTCTCCGTTCTCACAGGTACCCAAG
TACTCCTCCTGGTGGTGTCCGAGACCGGTCTCGTCTATACTTTCACCACC
CCGAAGCTTCAACCGCTGGTGACCAAGGCTGAGGGCAAGAACCTCATTCA
GGCCTGCCTGAATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATG
CGCCCGAGGTGCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTC
AACCCTCAACAGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTA
CATGACGAACGAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGC
AGCAACAGCAGGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGG
ATGCCACCTCAGCACCAGCCCACGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0000987cis-regulatory region sequence-specific DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0046983protein dimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211390ASPNIDRAFT_211390Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211390-T1ASPNIDRAFT_211390-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211390-T1.utr5p1ASPNIDRAFT_211390-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211390-T1.exon1ASPNIDRAFT_211390-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211390-T1.exon2ASPNIDRAFT_211390-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211390-T1.exon3ASPNIDRAFT_211390-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211390-T1.cdsASPNIDRAFT_211390-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211390-T1.utr3p1ASPNIDRAFT_211390-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR033897
DBxrefInterPro:IPR036879
DBxrefInterPro:IPR002100
DBxrefPFAM:PF00319
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1457741..1458865 +
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