|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:671024..673769+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_211539-T1 ID=ASPNIDRAFT_211539-T1|Name=ASPNIDRAFT_211539-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2746bp|location=Sequence derived from alignment at ACJE01000006.1:671024..673769+ (Aspergillus niger ATCC 1015)
CCGGAATTGACTTCTGGGCGCAACTCTCTTCCCGAGCCATTTCTCCTCTT
CTGCCTCTCCCCCCCCAAAAATCCTCCCACTTCTTTGCCAATCCCACTTG
GCAGTCTTTTCTCTTTCTTTCAACGGCTCTCTCGCTTCGTTTGAGTGGCC
TTTGGACCTTCGTTTGTCCCCCCCGTGTGCCCATTCACTCCTCTGCTCTG
CGTGATGGAATCCAACAGCTGCATCCCATCAGGACCCGTCGTTTAGCGTT
TGCTGCAAGGTAGGCCTATTTTCCCGGTGGACCCCGAATTTCCCTGAGCT
GACCCATCATCCTGCTCCAGCTTCTCCACATTCCAGCAGTCCCTTGTCCC
GCGATCCCTGATCTCCCCTCGTTGCCTTGTCTCGTTCCATTCGTTTGCAG
CTCCCAAGACCCTCGTCACCTCGCTCCAGCGCACATGGCAGGTTTCATAT
TCCATGCATAGTCCACAATTTATCGCATAACTCCCGGGTCAATCCAAATC
CCCTTGACGGACGTCCCCACTGTCAAGGATTGTTCTGCGACCAGGCTCGA
AATATACATTTTTTGCATTTTGGATTCACCGATCGCATCTCAAACACAAG
AATCAAGCGGGATGGAGCGCTCTGCCAGCGGCGGCTATCCCCAGCCGCTT
TCTTCCCCTCCGCCTGTTTACCTTCGTTCTTCTCCCCCCATTCCCCCGGT
GCCCCGTGAACCCCGCCGGGACAGCTTCAATCGCTTATACAGCAAGCCTA
TTCTCAGGAAATCTCTGACAGATCCGGTGTCCATGCCGGAAGATCGCCCC
GAAAGCCAACGGTATTCGGTTCCACGGGTCAGAATCCATGGAGAAAGCGA
TCAGCCAGTGCCGGAGTTTCATGAGGATGGTTTTGAAATGACGCTTCCCA
CTGATGAATTCGCCCAAATATCCCTCTCTGAGCAGCAGCAGACTCATGGA
AAGACCATCGACGCATCATCCCCACCGGGGGTGGAAATCTTCAAAGCCGG
CCAGCTACCAGAGAATGCGGCTTACGGACACACGCCTCGTAGCAGTGCCT
CTTGGTCAGTAGTCGATCCTCACACAAAACATGATAGTCTCGCCAATACT
AGCACGTCTTCCTTGGACCAACGACCTGCCAAGGACAGTCAGACCAGCTC
TTCCCGAGATAGTCTCGACAGCGCAACGCAAGCCTCCGAAATCTACGAAC
CTTTGCACTACCATCATCGACCGTACGAAGCTCCCCAGCCTGCAAACCGA
CAATCACCAGCAAGTGGCTCATCCGAGAATCTGCCGAAGCCACGCCCAGC
CGCCAATCGTCGCTCGCTTTCGACACACTCGCTCGGCTCCGACCTGGGTG
AAAGACGGAGATCTTCTCGGCTCTCCCCATACCTTCACGCCCGTGCATCA
TCCCGTGAATCCAGTGTATCTCCTGATGTCCGACCAGTATCCTTCGTTGA
ACAGCTTAACAGCTGCTATCCGCAACCCGGACCTGCCCCTGTTCAGATTG
ACAACTCCCATCTGCAATCTGCTGTCGGCAATAACGCATCGCTGCTGAGC
CACAAGCAAACGTTCGACATGTATCTGGCAAATGTCAAGAAGACTGATGA
CCCCGCCATCCAGTATGAGTTTGCCATCTTTATGGTGAATGCAATGTTGG
AAATGCCTCCCGATGAGGTCGACGGTGCATCCGCAGTGTATGGCCGGAAG
GGAAGCGACATTAACCGTGCTAGCCTTCTACGAGAGTCCAAATCCATCCT
CCAGCGCCTGGCTGATCGTAGCTATCCCTTTGCTCAATACTATCTGGCTG
ACGGATATGCTTCGGGGTTGTTCAGCAAAGGGAAAGAGGACTATGACCGA
GCGTTTCCACTGTTTCTAGCAGCCAGTAAACACGGACATGTCGAAGCATG
CTACCGGACTGCTTTGTGCTATGAGTTTGGCTGGGGTACCCGAGTTGAAG
CCGCCCGGGCACAGCAGTTCTACCGCCAGGCAGCATCCAAAAACCACCCC
GGCGCGATGCTACGTATGGCGAAGGCCTGTCTGGAGGGCGACATGGGGCT
CGGAAAGCGCTATCGCGAAGGCATCAAGTGGATGAAACGCGCTACAGATT
CATCCGATGCTCAGTATAACTCTGCTCCTTACGAATTAGGATTAATGCAT
GAAACGGGATATGGCGATGACGTATTTCCAGACCCTGCTTATGCTGCCCA
GCTGTTCACTAAAGCAGCGGACTTAGGCCACATTGAGGCCAGCTATCGCT
TGGGCGATGCCTACGAACACGGCAAACTCGAATGCCCCAGAGACCCTGCT
TTGTCGATCCATTTCTATACCAACGCTGCACAGGGTGGCCACCCTCTGGC
CATGATGGCACTGTGTGCTTGGTACCTCATCGGAGCAGAGCCGGTGCTTG
AAAAGGATGAATATGAAGCCTACGAATGGGCTAAACGTGCCGCGGAGACT
GGTAAGACCTGTAATGTCTATCACGCAATCCATGGAATGCTGACGTTGCC
GCAGGGCTCACCAAGGCGCAATATGCGGTTGGATACTTTACGGAAACAGG
AATTGGCTGTCGGCCAGACCACCTAGCAGCCAACGTTTGGTACGTGCAAG
CAGCGGACCAAGGCGACATCCGAGCTAAGCGCCGAATTGCCGCCATTCGA
GCAGCTGTCGACGGGGTTAATCCCGGGAAGGCCAGTGCAGCAGCTGCGGG
CACTGGCCGCGGGCAGAAGGAAAAGAAAGGTGCGTATGCCCTCTAA back to topCoding sequence (CDS) from alignment at ACJE01000006.1:671024..673769+ >ASPNIDRAFT_211539-T1 ID=ASPNIDRAFT_211539-T1|Name=ASPNIDRAFT_211539-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4164bp|location=Sequence derived from alignment at ACJE01000006.1:671024..673769+ (Aspergillus niger ATCC 1015)
ATGGAGCGCTCTGCCAGCGGCGGCTATCCCCAGCCGCTTTCTTCCCCTCC
GCCTGTTTACCTTCGTTCTTCTCCCCCCATTCCCCCGGTGCCCCGTGAAC
CCCGCCGGGACAGCTTCAATCGCTTATACAGCAAGCCTATTCTCAGGAAA
TCTCTGACAGATCCGGTGTCCATGCCGGAAGATCGCCCCGAAAGCCAACG
GTATTCGGTTCCACGGGTCAGAATCCATGGAGAAAGCGATCAGCCAGTGC
CGGAGTTTCATGAGGATGGTTTTGAAATGACGCTTCCCACTGATGAATTC
GCCCAAATATCCCTCTCTGAGCAGCAGCAGACTCATGGAAAGACCATCGA
CGCATCATCCCCACCGGGGGTGGAAATCTTCAAAGCCGGCCAGCTACCAG
AGAATGCGGCTTACGGACACACGCCTCGTAGCAGTGCCTCTTGGTCAGTA
GTCGATCCTCACACAAAACATGATAGTCTCGCCAATACTAGCACGTCTTC
CTTGGACCAACGACCTGCCAAGGACAGTCAGACCAGCTCTTCCCGAGATA
GTCTCGACAGCGCAACGCAAGCCTCCGAAATCTACGAACCTTTGCACTAC
CATCATCGACCGTACGAAGCTCCCCAGCCTGCAAACCGACAATCACCAGC
AAGTGGCTCATCCGAGAATCTGCCGAAGCCACGCCCAGCCGCCAATCGTC
GCTCGCTTTCGACACACTCGCTCGGCTCCGACCTGGGTGAAAGACGGAGA
TCTTCTCGGCTCTCCCCATACCTTCACGCCCGTGCATCATCCCGTGAATC
CAGTGTATCTCCTGATGTCCGACCAGTATCCTTCGTTGAACAGCTTAACA
GCTGCTATCCGCAACCCGGACCTGCCCCTGTTCAGATTGACAACTCCCAT
CTGCAATCTGCTGTCGGCAATAACGCATCGCTGCTGAGCCACAAGCAAAC
GTTCGACATGTATCTGGCAAATGTCAAGAAGACTGATGACCCCGCCATCC
AGTATGAGTTTGCCATCTTTATGGTGAATGCAATGTTGGAAATGCCTCCC
GATGAGGTCGACGGTGCATCCGCAGTGTATGGCCGGAAGGGAAGCGACAT
TAACCGTGCTAGCCTTCTACGAGAGTCCAAATCCATCCTCCAGCGCCTGG
CTGATCGTAGCTATCCCTTTGCTCAATACTATCTGGCTGACGGATATGCT
TCGGGGTTGTTCAGCAAAGGGAAAGAGGACTATGACCGAGCGTTTCCACT
GTTTCTAGCAGCCAGTAAACACGGACATGTCGAAGCATGCTACCGGACTG
CTTTGTGCTATGAGTTTGGCTGGGGTACCCGAGTTGAAGCCGCCCGGGCA
CAGCAGTTCTACCGCCAGGCAGCATCCAAAAACCACCCCGGCGCGATGCT
ACGTATGGCGAAGGCCTGTCTGGAGGGCGACATGGGGCTCGGAAAGCGCT
ATCGCGAAGGCATCAAGTGGATGAAACGCGCTACAGATTCATCCGATGCT
CAGTATAACTCTGCTCCTTACGAATTAGGATTAATGCATGAAACGGGATA
TGGCGATGACGTATTTCCAGACCCTGCTTATGCTGCCCAGCTGTTCACTA
AAGCAGCGGACTTAGGCCACATTGAGGCCAGCTATCGCTTGGGCGATGCC
TACGAACACGGCAAACTCGAATGCCCCAGAGACCCTGCTTTGTCGATCCA
TTTCTATACCAACGCTGCACAGGGTGGCCACCCTCTGGCCATGATGGCAC
TGTGTGCTTGGTACCTCATCGGAGCAGAGCCGGTGCTTGAAAAGGATGAA
TATGAAGCCTACGAATGGGCTAAACGTGCCGCGGAGACTGGGCTCACCAA
GGCGCAATATGCGGTTGGATACTTTACGGAAACAGGAATTGGCTGTCGGC
CAGACCACCTAGCAGCCAACGTTTGGTACGTGCAAGCAGCGGACCAAGGC
GACATCCGAGCTAAGCGCCGAATTGCCGCCATTCGAGCAGCTGTCGACGG
GGTTAATCCCGGGAAGGCCAGTGCAGCAGCTGCGGGCACTGGCCGCGGGC
AGAAGGAAAAGAAAGGTGCGTATGCCCTCTAAATGGAGCGCTCTGCCAGC
GGCGGCTATCCCCAGCCGCTTTCTTCCCCTCCGCCTGTTTACCTTCGTTC
TTCTCCCCCCATTCCCCCGGTGCCCCGTGAACCCCGCCGGGACAGCTTCA
ATCGCTTATACAGCAAGCCTATTCTCAGGAAATCTCTGACAGATCCGGTG
TCCATGCCGGAAGATCGCCCCGAAAGCCAACGGTATTCGGTTCCACGGGT
CAGAATCCATGGAGAAAGCGATCAGCCAGTGCCGGAGTTTCATGAGGATG
GTTTTGAAATGACGCTTCCCACTGATGAATTCGCCCAAATATCCCTCTCT
GAGCAGCAGCAGACTCATGGAAAGACCATCGACGCATCATCCCCACCGGG
GGTGGAAATCTTCAAAGCCGGCCAGCTACCAGAGAATGCGGCTTACGGAC
ACACGCCTCGTAGCAGTGCCTCTTGGTCAGTAGTCGATCCTCACACAAAA
CATGATAGTCTCGCCAATACTAGCACGTCTTCCTTGGACCAACGACCTGC
CAAGGACAGTCAGACCAGCTCTTCCCGAGATAGTCTCGACAGCGCAACGC
AAGCCTCCGAAATCTACGAACCTTTGCACTACCATCATCGACCGTACGAA
GCTCCCCAGCCTGCAAACCGACAATCACCAGCAAGTGGCTCATCCGAGAA
TCTGCCGAAGCCACGCCCAGCCGCCAATCGTCGCTCGCTTTCGACACACT
CGCTCGGCTCCGACCTGGGTGAAAGACGGAGATCTTCTCGGCTCTCCCCA
TACCTTCACGCCCGTGCATCATCCCGTGAATCCAGTGTATCTCCTGATGT
CCGACCAGTATCCTTCGTTGAACAGCTTAACAGCTGCTATCCGCAACCCG
GACCTGCCCCTGTTCAGATTGACAACTCCCATCTGCAATCTGCTGTCGGC
AATAACGCATCGCTGCTGAGCCACAAGCAAACGTTCGACATGTATCTGGC
AAATGTCAAGAAGACTGATGACCCCGCCATCCAGTATGAGTTTGCCATCT
TTATGGTGAATGCAATGTTGGAAATGCCTCCCGATGAGGTCGACGGTGCA
TCCGCAGTGTATGGCCGGAAGGGAAGCGACATTAACCGTGCTAGCCTTCT
ACGAGAGTCCAAATCCATCCTCCAGCGCCTGGCTGATCGTAGCTATCCCT
TTGCTCAATACTATCTGGCTGACGGATATGCTTCGGGGTTGTTCAGCAAA
GGGAAAGAGGACTATGACCGAGCGTTTCCACTGTTTCTAGCAGCCAGTAA
ACACGGACATGTCGAAGCATGCTACCGGACTGCTTTGTGCTATGAGTTTG
GCTGGGGTACCCGAGTTGAAGCCGCCCGGGCACAGCAGTTCTACCGCCAG
GCAGCATCCAAAAACCACCCCGGCGCGATGCTACGTATGGCGAAGGCCTG
TCTGGAGGGCGACATGGGGCTCGGAAAGCGCTATCGCGAAGGCATCAAGT
GGATGAAACGCGCTACAGATTCATCCGATGCTCAGTATAACTCTGCTCCT
TACGAATTAGGATTAATGCATGAAACGGGATATGGCGATGACGTATTTCC
AGACCCTGCTTATGCTGCCCAGCTGTTCACTAAAGCAGCGGACTTAGGCC
ACATTGAGGCCAGCTATCGCTTGGGCGATGCCTACGAACACGGCAAACTC
GAATGCCCCAGAGACCCTGCTTTGTCGATCCATTTCTATACCAACGCTGC
ACAGGGTGGCCACCCTCTGGCCATGATGGCACTGTGTGCTTGGTACCTCA
TCGGAGCAGAGCCGGTGCTTGAAAAGGATGAATATGAAGCCTACGAATGG
GCTAAACGTGCCGCGGAGACTGGGCTCACCAAGGCGCAATATGCGGTTGG
ATACTTTACGGAAACAGGAATTGGCTGTCGGCCAGACCACCTAGCAGCCA
ACGTTTGGTACGTGCAAGCAGCGGACCAAGGCGACATCCGAGCTAAGCGC
CGAATTGCCGCCATTCGAGCAGCTGTCGACGGGGTTAATCCCGGGAAGGC
CAGTGCAGCAGCTGCGGGCACTGGCCGCGGGCAGAAGGAAAAGAAAGGTG
CGTATGCCCTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR006597 |
| DBxref | PFAM:PF08238 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:671024..673769 + |
|
