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ASPNIDRAFT_211589-T1, ASPNIDRAFT_211589-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_211589-T1
Unique NameASPNIDRAFT_211589-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:558186..560080+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_211589-T1 ID=ASPNIDRAFT_211589-T1|Name=ASPNIDRAFT_211589-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1895bp|location=Sequence derived from alignment at ACJE01000006.1:558186..560080+ (Aspergillus niger ATCC 1015)
GTTTTTCTCATCACCATCTCATCAGCGTTGCAACGCTCTTGCGTATTGAA
AGCTCTCTCCGCCAGGCTATTACTTTCGCCTGCTGGTTTCCCACACGTTT
TGTTCACGCTCAAACCACTCTGGTTAGTTCCCTTCCCTTCCACCCCCTCC
GGCCCTGCTGTCAGGCCTCCATCAGTATTACGAAGCTGACCGGATCGTCT
TGCTTTTCCTTTCCAACAGAAGAACCACGCGTTGGTTTCTCTCTCTTCCT
GCCGGAGAAAGCCACTGAAAAACAGAGTCGGTCGAGAACTTGTCTATGTA
TTCGTCCTGCGTCAGAGATCTCGATCACCACCTGCCGCTCAAGCTGCAAT
CGTTTCGCTTCACGTCGAAACCTTGTAGTATACATTCGAAGTCCTGTGGC
TGAAAGCTAAGGGCTGCCGTATTCGCTGTGTCCATCATTCGACTCAACTA
AAAAAAATTCGATCTCAACAACCGCCATCATTCCACCAAAATTAGGAATA
TTCCACGCATGTCTTGTTTTGTCAAGATATTCCTGGTCCAGAATCCCTCC
CGCTTCTTCTTCATATAACCATCTCGCTTAGTCTCTTGAAGATTTCACCA
ATCAACAAACCGTCATCATGGCCACTGTCAACATTCGTCGGGATGTCTCC
GATCCCTTCTACCGTTACAAGATGGAGCGCCTTCAGTCCAAGATTGAGGG
CAAGGGCAACGGTATCAAGACCGTCGTCGTCAACCTGAACTCGGTCGCTC
AGTCGCTCAGTCGGCCTCCGTCTTACGTGATCAAGTACTTTGGCTTCGAG
CTGGGTGCTCAGGCCAACGCCAAGCCCACCGATGATCGCTGGATCATCAA
CGGTGCCCATGATGCCCCCAAGCTTCAAGACTATCTGGACGGCTTTATTT
CCAAGTTCGTGCTGTGCAAGAAATGTAAGAATCCGGAAACGGATGTCATC
ATCAAGGATGAGAAGATCTTTTTGGACTGCAAGGCCTGTGGACAGCGCTC
CGAGGTCGACTCCCGTCTGAAACTGAGCACCTTCATCATCCGCAACGGCG
CGCAAGGCAAGGGAGGGAAGAAGGACAAGGCCTCGAAGAAGGCCCGTCGT
GATCGAAACAAGGAGAAGAATGACACCGCGAATGGCGACAAGGATGGCAG
CCCCGGAGATAGCAACAACTCCGAGAACGGTGATGAGGAGAACGGCGATG
TCGCCCTGGAAGCAGGTAGCGATGACGAACTCACTCGCCGTATCAAGGCC
GGTGCCAAGGACATCGAGGCTGATGAGATCGATGATGATGAATGGGCTGT
TGACGTGTCGGAGGAGGCCGTCAAGGCTCGTGCCAAGGAGCTCCCCGATG
ATCTCAAGCGCTCCCTCGTTCTCGAGGATGGTGATGACGAGGGTGCTGAC
GGCCCCTCTGCCTACGACGAGCTTGGCAGCTGGATCCTCAACGCCGCTTC
TGAGAAGGGCGGTGTCACCGCTGTTAGTGACGTCGATATCTACATGAAGG
CCAAGGAATACGGCATCGAGAACAAGCACAAGACTGTCGCTGTTTTGGCT
CAGACCATCTTCGATGAGAAGATCGCCAAGCAGGTTCCTTCCCGTGCTGC
TCTGCTGAAGAAGATGATCACCTCCGAACGCCACGAGAAGGCCTTCCTCG
GTGGAACCGAGCGCTTTGTCGGCAAGGATCACCCTGAGCTCATTAGCCAG
GTCCCCGCTGTCTTGCTCAAGTACTATGAGCACGACCTCGTCTCTGAGGA
GACCCTCAAGGCGTGGGGTTCCAAGGCTAGCAAGAAGTATGTCGACATCC
AGACCAGCAAGAAGGTCCGCAAGGCTGCTGAACCCTTCCTCGAATGGCTT
GAGAACGCCGAGAGTGAGGAGGAGAGCGAGGAGGAGAGCGACTAG
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Coding sequence (CDS) from alignment at ACJE01000006.1:558186..560080+

>ASPNIDRAFT_211589-T1 ID=ASPNIDRAFT_211589-T1|Name=ASPNIDRAFT_211589-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1278bp|location=Sequence derived from alignment at ACJE01000006.1:558186..560080+ (Aspergillus niger ATCC 1015)
ATGGCCACTGTCAACATTCGTCGGGATGTCTCCGATCCCTTCTACCGTTA
CAAGATGGAGCGCCTTCAGTCCAAGATTGAGGGCAAGGGCAACGGTATCA
AGACCGTCGTCGTCAACCTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCT
CCGTCTTACGTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAA
CGCCAAGCCCACCGATGATCGCTGGATCATCAACGGTGCCCATGATGCCC
CCAAGCTTCAAGACTATCTGGACGGCTTTATTTCCAAGTTCGTGCTGTGC
AAGAAATGTAAGAATCCGGAAACGGATGTCATCATCAAGGATGAGAAGAT
CTTTTTGGACTGCAAGGCCTGTGGACAGCGCTCCGAGGTCGACTCCCGTC
TGAAACTGAGCACCTTCATCATCCGCAACGGCGCGCAAGGCAAGGGAGGG
AAGAAGGACAAGGCCTCGAAGAAGGCCCGTCGTGATCGAAACAAGGAGAA
GAATGACACCGCGAATGGCGACAAGGATGGCAGCCCCGGAGATAGCAACA
ACTCCGAGAACGGTGATGAGGAGAACGGCGATGTCGCCCTGGAAGCAGGT
AGCGATGACGAACTCACTCGCCGTATCAAGGCCGGTGCCAAGGACATCGA
GGCTGATGAGATCGATGATGATGAATGGGCTGTTGACGTGTCGGAGGAGG
CCGTCAAGGCTCGTGCCAAGGAGCTCCCCGATGATCTCAAGCGCTCCCTC
GTTCTCGAGGATGGTGATGACGAGGGTGCTGACGGCCCCTCTGCCTACGA
CGAGCTTGGCAGCTGGATCCTCAACGCCGCTTCTGAGAAGGGCGGTGTCA
CCGCTGTTAGTGACGTCGATATCTACATGAAGGCCAAGGAATACGGCATC
GAGAACAAGCACAAGACTGTCGCTGTTTTGGCTCAGACCATCTTCGATGA
GAAGATCGCCAAGCAGGTTCCTTCCCGTGCTGCTCTGCTGAAGAAGATGA
TCACCTCCGAACGCCACGAGAAGGCCTTCCTCGGTGGAACCGAGCGCTTT
GTCGGCAAGGATCACCCTGAGCTCATTAGCCAGGTCCCCGCTGTCTTGCT
CAAGTACTATGAGCACGACCTCGTCTCTGAGGAGACCCTCAAGGCGTGGG
GTTCCAAGGCTAGCAAGAAGTATGTCGACATCCAGACCAGCAAGAAGGTC
CGCAAGGCTGCTGAACCCTTCCTCGAATGGCTTGAGAACGCCGAGAGTGA
GGAGGAGAGCGAGGAGGAGAGCGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211589ASPNIDRAFT_211589Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211589-T1.utr5p1ASPNIDRAFT_211589-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_211589-T1.utr5p2ASPNIDRAFT_211589-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211589-T1.exon1ASPNIDRAFT_211589-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211589-T1.exon2ASPNIDRAFT_211589-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211589-T1.cdsASPNIDRAFT_211589-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211589-T1ASPNIDRAFT_211589-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262M7B
DBxrefInterPro:IPR016189
DBxrefInterPro:IPR016190
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR016021
DBxrefInterPro:IPR003307
DBxrefInterPro:IPR002735
DBxrefPFAM:PF02020
DBxrefPFAM:PF01873
Producttranslation initiation factor eIF5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:558186..560080 +
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