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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:541305..542195+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_211595-T1 ID=ASPNIDRAFT_211595-T1|Name=ASPNIDRAFT_211595-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=891bp|location=Sequence derived from alignment at ACJE01000006.1:541305..542195+ (Aspergillus niger ATCC 1015)
GCGCCTCGAACACCAGGTACCGGTGATCTTCCATTCTCTCTTTGAAGCAT
CACAATGAAGCAAATCAATACCATCGCTCACCTCACAACCCTCCTTTCCC
TTACTGCGAAGATAGCTGCCCACGGCCATGTGAGCAATATTGTCATCAAT
GGTGTCTCCTACCGTGGCTGGGACATCAACTCGGATCCCTACAATTCAGA
TCCTCCTGTGGTAGTCGCATGGCAGACACCGAACACTGCCAACGGATTCA
TTACGCCTGACGAATATGACACGGACGACATTATCTGTCACCTGGATGCC
ACTAATGCCGAGGGGCATGCCGTTATTGCTGCAGGAGACAAGATCAGCAT
TCAATGGACCACTTGGCCTGACACTCACCATGGACCGGTCATAAGTTATC
TTGCAAACTGTGGCTCGAGCTGCGAGACTGTTGACAAGACGACTCTTGAG
TTCTTCAAGATTGATGGTGTTGGCCTTGTTGATGACTCGACTGTGCCTGG
CACTTGGGGAGATGACCAGTTGATTGCAGACAACAATACATGGCTGGTCG
AGATCCCACCAGACATTGCCCCCGGATATTATGTTCTTCGCCACGAACTG
ATTGCCTTGCATGGGGCCAGCAGTGAGAATGGGGCACAGAATTATCCCCA
GTGTTTCAATCTCCAAGTCACCGGGTCAGGTACTGCCGAGCCTTCCGGCG
TACTCGGTACGGAGTTGTATAGCCCGACAGACCCCGGAATCCTTGTCAAT
ATCTACCAGTCACTGTCCACTTACGAGGTGCCTGGCCCAACATTGATCCC
GGAGGCAGTATCTGTTGTGCAATCGAGCTCGACCATCACAGCATCCGGAA
CACCCGTGACTGGGACCGCTGCGTCCACCGCGACATCATGA back to topCoding sequence (CDS) from alignment at ACJE01000006.1:541305..542195+ >ASPNIDRAFT_211595-T1 ID=ASPNIDRAFT_211595-T1|Name=ASPNIDRAFT_211595-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=837bp|location=Sequence derived from alignment at ACJE01000006.1:541305..542195+ (Aspergillus niger ATCC 1015)
ATGAAGCAAATCAATACCATCGCTCACCTCACAACCCTCCTTTCCCTTAC
TGCGAAGATAGCTGCCCACGGCCATGTGAGCAATATTGTCATCAATGGTG
TCTCCTACCGTGGCTGGGACATCAACTCGGATCCCTACAATTCAGATCCT
CCTGTGGTAGTCGCATGGCAGACACCGAACACTGCCAACGGATTCATTAC
GCCTGACGAATATGACACGGACGACATTATCTGTCACCTGGATGCCACTA
ATGCCGAGGGGCATGCCGTTATTGCTGCAGGAGACAAGATCAGCATTCAA
TGGACCACTTGGCCTGACACTCACCATGGACCGGTCATAAGTTATCTTGC
AAACTGTGGCTCGAGCTGCGAGACTGTTGACAAGACGACTCTTGAGTTCT
TCAAGATTGATGGTGTTGGCCTTGTTGATGACTCGACTGTGCCTGGCACT
TGGGGAGATGACCAGTTGATTGCAGACAACAATACATGGCTGGTCGAGAT
CCCACCAGACATTGCCCCCGGATATTATGTTCTTCGCCACGAACTGATTG
CCTTGCATGGGGCCAGCAGTGAGAATGGGGCACAGAATTATCCCCAGTGT
TTCAATCTCCAAGTCACCGGGTCAGGTACTGCCGAGCCTTCCGGCGTACT
CGGTACGGAGTTGTATAGCCCGACAGACCCCGGAATCCTTGTCAATATCT
ACCAGTCACTGTCCACTTACGAGGTGCCTGGCCCAACATTGATCCCGGAG
GCAGTATCTGTTGTGCAATCGAGCTCGACCATCACAGCATCCGGAACACC
CGTGACTGGGACCGCTGCGTCCACCGCGACATCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:AA9 |
| DBxref | InterPro:IPR005103 |
| DBxref | PFAM:PF03443 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:541305..542195 + |
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